Details from NCBI annotation

Gene Symbol Lin7a
Gene Name lin-7 homolog A (C. elegans), transcript variant X1
Entrez Gene ID 101717859

Database interlinks

Part of NW_004624837.1 (Scaffold)

For more information consult the page for NW_004624837.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LIN7A ENSCPOG00000001373 (Guinea pig)

Gene Details

lin-7 homolog A (C. elegans)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001243, Guinea pig)

Protein Percentage 99.03%
CDS Percentage 95.31%
Ka/Ks Ratio 0.02896 (Ka = 0.0047, Ks = 0.1639)

LIN7A ENSG00000111052 (Human)

Gene Details

lin-7 homolog A (C. elegans)

External Links

Gene Match (Ensembl Protein ID: ENSP00000447488, Human)

Protein Percentage 99.57%
CDS Percentage 95.14%
Ka/Ks Ratio 0.00905 (Ka = 0.0019, Ks = 0.2139)

Lin7a ENSMUSG00000019906 (Mouse)

Gene Details

lin-7 homolog A (C. elegans)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000020057, Mouse)

Protein Percentage 99.14%
CDS Percentage 92.27%
Ka/Ks Ratio 0.01349 (Ka = 0.0042, Ks = 0.3135)

Lin7a ENSRNOG00000004527 (Rat)

Gene Details

lin-7 homolog a (C. elegans) (Lin7a), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000006083, Rat)

Protein Percentage 99.08%
CDS Percentage 90.67%
Ka/Ks Ratio 0.01112 (Ka = 0.0045, Ks = 0.4082)

Genome Location

Sequence Coding sequence

Length: 702 bp    Location: 257524..104948   Strand: -
>XM_004867520.1
ATGCTGAAGCCGAGCGTCACTTCGGCTCCCACGGCAGACATGGCGACACTGACCGTGGTCCAGCCGCTCACCCTGGACAGAGATGTTGCAAGAGCAATTGAATTACTGGAAAAACTACAGGAATCTGGAGAAGTACCAGTGCACAAGCTACAGTCCCTCAAAAATGTGCTTCAGAGTGAGTTTTGTACAGCAATTCGAGAGGTATATCAATATATGCATGAAACGATAACTGTTAATGGCTGTCCTGAATTCCGTGCAAGGGCCACAGCAAAGGCAACAGTTGCAGCTTTTGCAGCTAGCGAAGGCCACTCCCACCCTCGTGTAGTCGAACTGCCAAAGACTGATGAAGGCCTTGGTTTTAATGTGATGGGAGGAAAAGAGCAAAATTCCCCAATTTATATCTCTCGCATCATTCCTGGAGGGGTGGCTGAAAGACACGGAGGACTCAAAAGAGGAGACCAGCTGCTCTCAGTGAATGGAGTGAGCGTGGAAGGAGAGCACCATGAGAAAGCTGTAGAACTACTCAAGGCTGCTAAGGACAGTGTCAAGTTGGTGGTTAGATACACCCCAAAAGTGCTGGAAGAAATGGAGGCTCGCTTTGAAAAGCTACGGACAGCCCGACGTCGACAGCAGCAGCAATTGCTCATTCAGCAGCAGCAACAGCAACAACAGCAACAAACACAACAAAACCACATGTCATAG

Related Sequences

XP_004867577.1 Protein

Lin7a PREDICTED: protein lin-7 homolog A isoform X1 [Heterocephalus glaber]

Length: 233 aa      View alignments
>XP_004867577.1
MLKPSVTSAPTADMATLTVVQPLTLDRDVARAIELLEKLQESGEVPVHKLQSLKNVLQSEFCTAIREVYQYMHETITVNGCPEFRARATAKATVAAFAASEGHSHPRVVELPKTDEGLGFNVMGGKEQNSPIYISRIIPGGVAERHGGLKRGDQLLSVNGVSVEGEHHEKAVELLKAAKDSVKLVVRYTPKVLEEMEARFEKLRTARRRQQQQLLIQQQQQQQQQQTQQNHMS