Sequence details NCBI ID: XM_004867482.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Pgk1
Gene Name phosphoglycerate kinase 1, transcript variant X1
Entrez Gene ID 101714377

Database interlinks

Part of NW_004624836.1 (Scaffold)

For more information consult the page for NW_004624836.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PGK1 ENSCPOG00000023785 (Guinea pig)

Gene Details

phosphoglycerate kinase 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000015876, Guinea pig)

Protein Percentage 96.4%
CDS Percentage 94.4%
Ka/Ks Ratio 0.09718 (Ka = 0.0184, Ks = 0.1897)

PGK1 ENSG00000102144 (Human)

Gene Details

phosphoglycerate kinase 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000362413, Human)

Protein Percentage 95.92%
CDS Percentage 92.57%
Ka/Ks Ratio 0.0798 (Ka = 0.0226, Ks = 0.2836)

Genome Location

Sequence Coding sequence

Length: 1275 bp    Location: 2676237..2657323   Strand: -
Raw sequence   
>XM_004867482.1
ATGTCGCTTTCTAACAAGCTGACTCTGGACAAGCTGCAAGTGAAAGGGAAGCGGGTCGTTATGAGAGTGGATTTCAATGTTCCTATGAAGAACAATCAGATAACCAACAACCAAAGAATCAAGGCTGCTGTCCCAAGCATCAAATTCTGCTTGGACAATGGAGCCAAGTCAGTTGTTCTTATGAGCCACCTGGGCAGGCCGGATGGTGTCCCAATGCCTGACAAGTACTCCTTACAGCCAGTTGCTGTGGAACTCAAATCTCTGCTGGGCAAGGATGTTCTATTCTTGAAGGACTGTGTGGGCTCAGAAGTAGAGAAAGCCTGTTCTGACCCAGCAGTTGGTTCTGTCATCCTGCTGGAGAACCTCCGCTTTCATGTGGAGGAGGAAGGGAAGGGAAAAGATGCTTCTGGGAACAAGGTTAAAGCTGAGCCAGCCAAAATAGAAGCTTTCCGAGCTTCACTTTCCAAGCTAGGGGATGTCTATGTCAATGATGCTTTTGGCACTGCACACCGAGCCCACAGCTCTATGGTGGGAGTCAATCTGCCTCAGAAAGCCGGTGGATTTTTGATGAAGAAGGAACTAAACTATTTTGCTAAGGCCTTGGAGAACCCAGAGCGACCCTTCCTGGCCATCTTGGGCGGAGCTAAAGTTGCAGATAAGATCCAGCTCATCAATAATATGCTCGACAAAGTCAATGAGATGATTATTGGTGGTGGAATGGCTTTTACCTTCCTTAAGGTGCTCAACAACATGGAGATTGGCACGTCTCTGTTTGATGAAGAGGGAGCCAAGATTGTTAAAGACCTGATGTCCAAAGCTGAGAAGAATGGTGTGAAGATTACTTTGCCTGTTGACTTTGTCACTGCTGAAAAGTTTGATGAGAATGCCAAGACTGGCCAAGCCACTGTGGCCTCTGGCATACCTGCTGGATGGATGGGCTTGGACTGTGGTCCTGAGAGCAGCAAGAAGTATGCTGAGGCTGTTGGTCGTGCGAAGCAGATTGTATGGAATGGACCCGTGGGGGTATTTGAATGGGAAGCTTTTGCCCGAGGAACCAAAGCCCTCATGGATGAGGTGGTGAAAGCCACTTCCAGGGGCTGCATCACCATCATAGGAGGTGGAGACACTGCTACTTGCTGTGCAAAATGGAACACAGAAGACAAAGTCAGCCATGTGAGCACTGGAGGTGGTGCCAGTTTAGAGCTCCTCGAAGGTGAGGTTCTTCCCTGTTTTTTTGGCTTATTTGTGGGTGGAATGGAGAAAGTTCATAAGTAG

Related Sequences

XP_004867539.1 Protein

Pgk1 PREDICTED: phosphoglycerate kinase 1 isoform X1 [Heterocephalus glaber]

Length: 424 aa      
>XP_004867539.1
MSLSNKLTLDKLQVKGKRVVMRVDFNVPMKNNQITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRPDGVPMPDKYSLQPVAVELKSLLGKDVLFLKDCVGSEVEKACSDPAVGSVILLENLRFHVEEEGKGKDASGNKVKAEPAKIEAFRASLSKLGDVYVNDAFGTAHRAHSSMVGVNLPQKAGGFLMKKELNYFAKALENPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMAFTFLKVLNNMEIGTSLFDEEGAKIVKDLMSKAEKNGVKITLPVDFVTAEKFDENAKTGQATVASGIPAGWMGLDCGPESSKKYAEAVGRAKQIVWNGPVGVFEWEAFARGTKALMDEVVKATSRGCITIIGGGDTATCCAKWNTEDKVSHVSTGGGASLELLEGEVLPCFFGLFVGGMEKVHK