Sequence details NCBI ID: XM_004867268.1 (Coding sequence)

Details from NCBI annotation

Gene Symbol Ccdc88a
Gene Name coiled-coil domain containing 88A, transcript variant X6
Entrez Gene ID 101708183

Database interlinks

Part of NW_004624833.1 (Scaffold)

For more information consult the page for NW_004624833.1 (Scaffold)

Genome Location

Sequence Coding sequence

Length: 5535 bp    Location: 6116729..6258086   Strand: +
Raw sequence   
>XM_004867268.1
ATGGAGAACGAAAATTTTACTCCCCTCCTGGAGCAGTTCATGACCAGACCCTTGGTCACTTGGGTTAAAACGTTTGGACCTCTGGCTGCTGGGAATGGGACCAACCTGGATGAATATGTGGCTTTGGTAGATGGAGTGTTCTTGAACGAGGTCATGCTCCAAATTAATCCTAAATTGGAGAATCAGAGAGTAAATAAAAAAGTCAACAATGATGCTTCACTTAGAATTCATAATCTATCCATTTTGGTGAGACAGATAAAATTTTATTACCAGGAGACTTTGCAGCAATTGATTATGATGCCATTGCCAAATGTCTTAATCATTGGCAAAAATCCCTTTTCCGAACAAGGAACAGAAGAAGTTAAAAAACTGCTTTTACTTTTGCTGGGTTGTGCAGTTCAGTGTCAGAACAAAGAAGAATTTATAGAAAGAATTCAAGGATTGGATTTTGATACAAAAGCTGCAGTTGCTGCACATATTCAAGAGGTAACCCATAATCAAGAGAATGTGTTTGATCTGCAGTGGATGGAAGTGACAGATATGTCTCAGGAGGATATAGAACCCCTCTTGAAAAATATGGCATTGCATCTAAAAAGACTTATAGATGAGAGAGATGAACATTCAGAGACTATGGTAGAGCTCTCTGAAGAACGAGATGGTCTTCATTTTTTACCCCATGCTTCTTCATCTGCGCAGTCACCCTGTAGTTCTCCAGGCATGAAGCGAACAGAAAGTCGACAGCATCTGTCAGTGGAACTGGCAGATGCTAAGGCCAAGATAAGAAGGCTCAGGCAGGAACTGGAGGAAAAGACTGAACAGTTACTGGACTGTAAACAAGAACTTGAGCAAATGGAAATAGAACTAAAAAGGCTTCAACAAGAGAATATGAATTTGCTATCGGATGCTCGTTCTGCTAGAATGTACCGAGATGAATTAGATGCACTCCGAGAGAAGGCAATCAGAGTTGATAAACTGGAAAGTGAAGTCAGCAGATATAAAGAAAGACTACATGATATTGAATTTTATAAGGCAAGAGTTGAGGAATTAAAAGAAGACAATCAAGTTTTATTAGAAACAAAAACCATGTTGGAAGACCAACTAGAAGGAACTCGAGCTCGTTCTGATAAATTACATGAGTTAGAAAAAGAGAATTTACAACTAAAGGCTAAACTGCATGATATGGAAATGGAACGAGATATGGATAGAAAAAAGATTGAAGAATTAATGGAAGAAAATATGACTTTGGAAATGGCACAGAAACAAAGTATGGATGAATCATTACATCTTGGCTGGGAACTGGAACAGATATCCAGAACTAGTGAACTTTCTGAAGCACCACAAAAATCCTTGGGCCATGAGGTGAATGAACTGACATCAAGTAGATTGTTGAAGTTGGAGATGGAGAACCAGAGTTTGACAAAAACTGTAGAAGAGCTTCGAAGTACTATGGATTCTGCAGAAGGCAATACTTCCAAAATCCTAAAACTTGAAAAAGAAAATCAAAGCCTAAGTAAAAAGGTTGAAATTCTTGAAAATGAGATTATTCAAGAAAAGCAAAGTCTTCAGAATTGTCAGAATTTAAGCAAGGATCTAATGAAGGAGAAAGCACATCTTGAAAAAACAATTGAAACACTTAGAGAAAATTCAGAGAGACAGATTAAAATATTGGAACAGGAAAATGAACATCTGAATCAAACAGTGTCTTCCTTGAGACAGCGCTCTCAAATAAGTGCTGAAGCAAGGGTGAAAGACATTGAAAAAGAAAACAAAATTCTACATGAGTCAATCAAAGAAACAAGTAGCAAACTGAGCAAGATTGAATTTGAGAAAAGACAAATTAGAAAAGAATTGGAACATTATAAAGAAAAAGGAGAACGAGCAGAAGAACTTGAAAATGAGTTACATCATCTTGAAAAGGAAAATGAATTGTTACAGAAAAAGATAACTAATTTAAAAATTACTTGTGAAAAAATAGAGGCCCTAGAACAAGAAAATTCAGAGCTAGAAAGAGAAAATAGAAAATTTAAAAAAACATTGGATAGCTTTAAAAACCTTACTTTTCAGTTAGAATCACTAGAAAAAGAGAATTCCCAACTTGATGAGGAAAACTTAGAACTGCGAAGGAATGTGGAATCGTTGAAGTGTGCAAGCATGAAAATGGCTCAGCTACAGCTAGAAAACAAGGAACTAGAAAGTGAAAAAGAGCAACTTAAAAAAGGTTTGGAGCTCATGAAAGCATCTTTCAAGAAAACAGAGCGCTTGGAAGTTAGCTACCAGGGATTAGACACAGAAAATCAAAGGCTACAGAAAGCTCTGGAAAATAGCAATAAAAAAATACAGCAATTAGAAAGTGAACTACAAGACTTAGAAATGGAAAATCAAACATTGCAGAAAAACCTAGAAGAATTAAAAATATCTAGCAAAAGACTAGAACAATTGGAAAAAGAAAATAAATCATTAGAGCAAGAGACATCACAACTAGAAAAGGATAAGAAGCAGTTGGAGAAGGAAAATAAGAGACTACGACAACAAGCAGAAATAAAAGATACTACATTAGAAGAAAATAATGTGAAGATTGGAAATTTGGAAAAAGAAAACAAAACCCTATTCAAAGAAATTGGTATATATAAAGAATCTTGTGTTCGTCTGAAAGAATTAGAGAAAGAAAATAAGGAACTTGTGAAAAGAGCAACTATTGATATAAAAACTTTGGTTACATTACGTGAGGATTTGGTGAGTGAAAAATTGAAGACTCAACAAATGAACAATGATCTTGAAAAATTAACTCATGAGCTTGAGAAGATAGGTTTAAATAAAGAGAGACTCTTACATGATGAGCAGAGTACTGATGACAGTAGGTATAAACTTTTGGAATCAAAATTAGAATCCACTCTTAAGAAGTCCCTTGAAATAAAAGAAGAAAAAATTGCTGCTTTAGAAGCTCGATTAGAAGAATCCACAAATTATAACCAGCAGTTGCGCCAAGAACTTAAAACAGTGAAAAAAAATTATGAAGCTCTCAAGCAGAGACAAGATGAGGAAAGGATGGTGCAGAGCTCTCCTCCAGTATCTGGTGAAGATAACAAATGGGAAAGAGAAAGTCAAGAAACGACTAGAGAGCTTCTAAAAGTTAAAGACAGATTAATTGAAGTAGAAAGAAATAATGCTACACTGCAAGCAGAGAAGCAAGCATTGAAAACTCAACTGAAGCAGCTTGAAACACAGAACAATAATTTGCAGGCTCAGATTCTTGCACTTCAGAAGCAGACAGTGTCATTACAGGAACAGAATACCACTCTTCAAACACAGAATGCCAAGCTTCAGGTTGAAAATTCCACCCTTAATTCCCAAAGTACTTCACTTATGAACCAGAATGCACAGCTTCTAATTCAACAGTCTTCCTTAGAAAATGAAAATGAATCTATAATCAAAGAACGAGAAGACTTGAAATCTCTCTATGATTCTCTTATCAAAGATCATGAAAAGCTAGAACTTCTTCATGAAAGGCAGGCTTCAGAGTATGAATCTCTCATCTCTAAACATGGAACTCTAAAGTCTGCCCACAAAAATCTTGAGGCAGAACATAAAGACCTTGAAGACCGTTACAATCAGTTATTAAAACAGAAGGGACAATTGGAAGATTTGGAAAAAATGCTCAAAGTAGAGCAGGAAAAAATGCTGCTTGAAAATAAAAAACATGAGACGGTAGCTGCAGAGTACAAGAAACTTTGTGGTGAAAATGATAGGTTGAATCATACATATAGTCAGCTTTTAAAAGAGACTGAAGTTTTACAAACTGACCATAAAAACTTGAAAAGTCTCCTAAATAATTCTAAACTGGAACAAACAAGATTAGAAGCTGAATTTTCAAAGCTAAAGGAACAATACCAGCAACTGGATATCACATCCACAAAGCTGAATAACCAATGTGAGCTGCTCAGCCAACTTAAAGGGAATTTGGAAGAAGAAAATCGACATCTACTAGATCAAATTCAGACATTAATGCTACAAAACAGAACACTTTTGGAGCAAAATATGGAAAGCAAGGATCTTTTTCATGTTGAACAAAGACAGTACATTGATAAGTTAAATGAATTAAGACGACAAAAGGAGAAATTAGAAGAGAAAATTATGGATCAGTACAAATTTTATGACCCATCTCCTCCTAGAAGGAGAGGCAACTGGATTACTCTCAAAATGAGAAAATTGATAAAGTCCAAGAAGGATATTAATCGAGAACGTCAGAAATCTCTAACATTAACACCTACCCGCTCAGACTCCAGCGAAGGATTTCTTCACCTGCCTTATCAAGATAGTCAAGATAGTTCTTCAGTAGGGTCAAATTCTTTAGAAGATGGCCAAACCCTGGGAACCAAGAAGAGCAGCACCATGAATGACCTGGTGCAGTCCATGGTCCTAGCAGGACAGTGGACAGGTAGTACTGAGAATTTGGAGGTTCCTGATGATATTTCAACGGGTAAAAGGAGAAAAGAATTGGGAGCTATGGCCTTCTCTACTACAGCCATCAACTTTTCAACTGTCAACTCTTCTGCAGGCTTCAGATCCAAGCAGTTGGTTAATAAAAAAGATACCACATCCTTTGAAGACATAAGTCCACAAGGTATAAGTGATGATTCTAGTACGGGATCAAGAGTTCATGCTTCAAGACCAGCCAGCCTTGATAGTGGCAGAACATCCACTAGCAATAGCAATAATAATGCTTCACTCCATGAAATCAAAGCAGGTGCAGTTAATAACCAAAGCAGGTCACAAAGCCACAGTAGTGGAGAATTTAGCCTGCTTCATGATTATGAGGCATGGTCCAGCAGTGGAAGTAGTCCAATCCAGTACTTGAAAAGACAGACCGCATCAAGTCCAGTGCTCCAGCACAAAATGCCAGAATCACTAGAAACTCGAACACACCACAGGATAAAAACTGGTTCCCCTGGAAGTGAAGTCGTTACTCTACAACAATTTTTAGAAGAAAGCAACAAGCTTACCTCAATACAGTTAAAATCTTCAAGTCAAGAGAATCTTTTAGATGAAGTAATGAAAAGCTTGTCGGTCTCTTCTGACTTTTTGGGAAAAGACAAGCCAATTAGCTGTGGTCTGACCAGGTCAGTAAGTGGAAAAGCCCCAGAGGACTTCTGTGATAGACGGACAACTAAGCCTGAGTTTGTGAGAGCTGGTTCTCGAAAGACTGAAGGTATCTACGTCATTAGTTCTGCAGGAAAACCTACACCAGGCACTCAAGGAAAGATAAAATTTGTAAAAGAAACCTCTGTGTCACGACAATCAAAAGATAGCAACCCTTATGCCACTTTACCTCGTGCAAGCAATGTAATCTCAACTGCTGAAGGGACTACACGAAGGACAAGCATCCATGACTTTTTGACCAAGGACAGTAGACTGCCAGTGTCTGTTGACTCATCACAGCCTACTGCTGGTAGCAACATCACTGCAGCATCTAATGTGGACAAAGTACAAGAAAGCAGAAATTCAAAAAGCAGGTCTAGGGAGCAACAAAGCTCCTAA

Related Sequences

XP_004867325.1 Protein

Ccdc88a PREDICTED: girdin isoform X6 [Heterocephalus glaber]

Length: 1844 aa      
>XP_004867325.1
MENENFTPLLEQFMTRPLVTWVKTFGPLAAGNGTNLDEYVALVDGVFLNEVMLQINPKLENQRVNKKVNNDASLRIHNLSILVRQIKFYYQETLQQLIMMPLPNVLIIGKNPFSEQGTEEVKKLLLLLLGCAVQCQNKEEFIERIQGLDFDTKAAVAAHIQEVTHNQENVFDLQWMEVTDMSQEDIEPLLKNMALHLKRLIDERDEHSETMVELSEERDGLHFLPHASSSAQSPCSSPGMKRTESRQHLSVELADAKAKIRRLRQELEEKTEQLLDCKQELEQMEIELKRLQQENMNLLSDARSARMYRDELDALREKAIRVDKLESEVSRYKERLHDIEFYKARVEELKEDNQVLLETKTMLEDQLEGTRARSDKLHELEKENLQLKAKLHDMEMERDMDRKKIEELMEENMTLEMAQKQSMDESLHLGWELEQISRTSELSEAPQKSLGHEVNELTSSRLLKLEMENQSLTKTVEELRSTMDSAEGNTSKILKLEKENQSLSKKVEILENEIIQEKQSLQNCQNLSKDLMKEKAHLEKTIETLRENSERQIKILEQENEHLNQTVSSLRQRSQISAEARVKDIEKENKILHESIKETSSKLSKIEFEKRQIRKELEHYKEKGERAEELENELHHLEKENELLQKKITNLKITCEKIEALEQENSELERENRKFKKTLDSFKNLTFQLESLEKENSQLDEENLELRRNVESLKCASMKMAQLQLENKELESEKEQLKKGLELMKASFKKTERLEVSYQGLDTENQRLQKALENSNKKIQQLESELQDLEMENQTLQKNLEELKISSKRLEQLEKENKSLEQETSQLEKDKKQLEKENKRLRQQAEIKDTTLEENNVKIGNLEKENKTLFKEIGIYKESCVRLKELEKENKELVKRATIDIKTLVTLREDLVSEKLKTQQMNNDLEKLTHELEKIGLNKERLLHDEQSTDDSRYKLLESKLESTLKKSLEIKEEKIAALEARLEESTNYNQQLRQELKTVKKNYEALKQRQDEERMVQSSPPVSGEDNKWERESQETTRELLKVKDRLIEVERNNATLQAEKQALKTQLKQLETQNNNLQAQILALQKQTVSLQEQNTTLQTQNAKLQVENSTLNSQSTSLMNQNAQLLIQQSSLENENESIIKEREDLKSLYDSLIKDHEKLELLHERQASEYESLISKHGTLKSAHKNLEAEHKDLEDRYNQLLKQKGQLEDLEKMLKVEQEKMLLENKKHETVAAEYKKLCGENDRLNHTYSQLLKETEVLQTDHKNLKSLLNNSKLEQTRLEAEFSKLKEQYQQLDITSTKLNNQCELLSQLKGNLEEENRHLLDQIQTLMLQNRTLLEQNMESKDLFHVEQRQYIDKLNELRRQKEKLEEKIMDQYKFYDPSPPRRRGNWITLKMRKLIKSKKDINRERQKSLTLTPTRSDSSEGFLHLPYQDSQDSSSVGSNSLEDGQTLGTKKSSTMNDLVQSMVLAGQWTGSTENLEVPDDISTGKRRKELGAMAFSTTAINFSTVNSSAGFRSKQLVNKKDTTSFEDISPQGISDDSSTGSRVHASRPASLDSGRTSTSNSNNNASLHEIKAGAVNNQSRSQSHSSGEFSLLHDYEAWSSSGSSPIQYLKRQTASSPVLQHKMPESLETRTHHRIKTGSPGSEVVTLQQFLEESNKLTSIQLKSSSQENLLDEVMKSLSVSSDFLGKDKPISCGLTRSVSGKAPEDFCDRRTTKPEFVRAGSRKTEGIYVISSAGKPTPGTQGKIKFVKETSVSRQSKDSNPYATLPRASNVISTAEGTTRRTSIHDFLTKDSRLPVSVDSSQPTAGSNITAASNVDKVQESRNSKSRSREQQSS