Sequence details NCBI ID: XM_004867257.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Pnpt1
Gene Name polyribonucleotide nucleotidyltransferase 1
Entrez Gene ID 101705889

Database interlinks

Part of NW_004624833.1 (Scaffold)

For more information consult the page for NW_004624833.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PNPT1 ENSCPOG00000011008 (Guinea pig)

Gene Details

polyribonucleotide nucleotidyltransferase 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009894, Guinea pig)

Protein Percentage 92.7%
CDS Percentage 92.92%
Ka/Ks Ratio 0.14398 (Ka = 0.0346, Ks = 0.2405)

PNPT1 ENSG00000138035 (Human)

Gene Details

polyribonucleotide nucleotidyltransferase 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000400646, Human)

Protein Percentage 91.57%
CDS Percentage 90.63%
Ka/Ks Ratio 0.11045 (Ka = 0.041, Ks = 0.3716)

Pnpt1 ENSMUSG00000020464 (Mouse)

Gene Details

polyribonucleotide nucleotidyltransferase 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000020756, Mouse)

Protein Percentage 89.78%
CDS Percentage 86.72%
Ka/Ks Ratio 0.08595 (Ka = 0.053, Ks = 0.6164)

Pnpt1 ENSRNOG00000003600 (Rat)

Gene Details

polyribonucleotide nucleotidyltransferase 1 (Pnpt1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000004919, Rat)

Protein Percentage 90.56%
CDS Percentage 87.97%
Ka/Ks Ratio 0.08581 (Ka = 0.0474, Ks = 0.5523)

Genome Location

Sequence Coding sequence

Length: 2355 bp    Location: 5883332..5923953   Strand: +
Raw sequence   
>XM_004867257.1
ATGGCTGCTTGCAGGCAGTGCTGCTCCTGTCTACGGCTCCGGCCGCTGGGTGATGGTCCCCTCCGACTATCTGAGCGGAATTTGGCACTCGCTCATTTGCAAGTACGAGCACTATGGAGTGGCACGAGGTCCCGAGCTGTATCTGTGGACTTAGGCAACAGAAAATTAGAAATATCTTCTGGAAAACTGGCCAGATTTGCAGATGGCTCTGCTGTAGTACAGTCAGGTGATACTGCAGTAATGGTCACAGCAGTCAGCAAAACAAAACCTTCACCTTCACAGTTCATGCCTTTGGTAGTTGACTATAGACAGAAGGCTGCTGCAGCAGGTAGAATTCCCACAAACTACCTTAGAAGAGAAATTGGTTCTTCTGATAGAGAAATTCTTACAAGTCGAATAATTGATCGATCAATTAGACCTCTCTTTCCAGCTGGCTACTTTTATGATACACAGGTCCTTTGTAATCTGTTAGCAGTAGATGGTATTAATGAACCTGATGTCCTAGCAATTAATGGTGCTTCAGTAGCCCTCTCATTATCAGATATTCCTTGGAATGGACCTGTTGGGGCAGTAAGAATAGGAATGATTGGTGGAGAATGTATTGTTAACCCAACAAGAAAAGAAATGTCTTCTAGTACTTTAAATTTAGTGGTTGCTGGAGCACCTAAAAGTCAGATTGTCATGTTGGAAGCCTCTGCAGAGAATATTTTACAGCAAGACTTTTGCCATGCTATCAAAGTGGGAGTAAAATATACCCAACAAATAATTCAAGGGATCCAGCAATTAGTAAAAGAAATTGGGGTTGCCAAGAGGACACCTCAGAAGATATTTACCCCTCTACCAGACATTGTGAAACATGCTCATAACCTTGCCATGGAGAAACTTTACGCAGTTTTTACAGATTACAAACATGATAAAGTTTCCAGAGATGAAGCTGTTAACAAGATAAGATTAGATACAGAGGAACAACTGAAAGAAAAGTTTCCAGAGGCTGATCCATATGAAATAATGGAGTCCTTCAATGTTGTTTCAAAGGAGGTTTTTAGAAGTATTATTTTGAATGAATATAAAAGATGTGATGGACGTGATTTGACTTCACTTAGGAATATAAGTTGTGAGGTAGATATGTTTAAAACTCTTCATGGATCAGCATTATTTCAGAGGGGACAAACACAGGTGCTTTGTACTGTTACGTTTGATTCATTAGAATCCAGTATAAAATCAGATCAAATTATAACAGCTATAAATGGGATAAAAGATAAAAATTTCATGCTGCACTATGAGTTTCCTCCTTATGCAACTAATGAAACTGGCAAAGTCACTGGAATAAATAGGAGAGAACTTGGGCATGGTGCTCTTGCAGACAAAGCTTTGTATCCTGTTATTCCCAAAGATTTTCCTTTCACTATAAGGGTTACATCTGAAGTCCTAGAGTCAAATGGGTCCTCTTCTATGGCATCTGCATGTGGTGGAAGTTTGGCATTAATGGATGCAGGGGTTCCAGTATCATCTGCTGTTGCAGGTGTAGCAATAGGATTGATCACTAAAATCAATCCTGAGAAAGGTGAAATAGAAGATTATCGTTTGCTGACAGATATTCTGGGAATTGAAGATTACAACGGTGACATGGATTTCAAAATAGCTGGTACCAATAAGGGAATAACTGCATTACAGGCTGATATTAAATTACCAGGAATACCAATAAAAATTGTAATGGAGGCTATTCAGCAAGCATCAGTGGCAAAGAGGGAAATATTACAGATTATGAACAAAACAATTTCAAAACCTCGAGGATCCAGAAAAGAAAATGGACCTGTTGTAGAAACTGTTGAAATTCCATTATCAAAACGAGCAAAATTTGTTGGACCAGGTGGATATCATTTAAAAAGACTTCAAGCTGAAACAGGTGTAACTATTAGTCAAGTGGATGAAGAAACATATTCTGTGTTTGCACCAACACCTAGTGCAATGCATGAGGCAAGAGAATTCATCACTGAAATCTGTAAAGATGACCAAGAATACCAATTAGAATTTGGAGCTGTTTATACTGCCACAATAACTGAAATCAGAGACTCTGGAGTAATGGTAAAACTATACCCAAATATGACTGCAGTACTACTTCATAACACACAACTTGATCAACGAAAGATTAAACATCCCACTGCCCTAGGATTAGAAGTTGGCCAAGAAATTCAGGTGAAATACTTTGGACGCGATCCAGCTGATGGAAGAATGAGGCTTTCTCGTAAAGTGCTTCAGTCCCCAGCTACATCTCTTGTCAAAACTCTAAGTGACAGAAACAGTGTTATGATGAGAGAATCTATTTCACAATCATCATCTAATTCTTCTGGGTGA

Related Sequences

XP_004867314.1 Protein

Pnpt1 PREDICTED: polyribonucleotide nucleotidyltransferase 1, mitochondrial [Heterocephalus glaber]

Length: 784 aa      View alignments
>XP_004867314.1
MAACRQCCSCLRLRPLGDGPLRLSERNLALAHLQVRALWSGTRSRAVSVDLGNRKLEISSGKLARFADGSAVVQSGDTAVMVTAVSKTKPSPSQFMPLVVDYRQKAAAAGRIPTNYLRREIGSSDREILTSRIIDRSIRPLFPAGYFYDTQVLCNLLAVDGINEPDVLAINGASVALSLSDIPWNGPVGAVRIGMIGGECIVNPTRKEMSSSTLNLVVAGAPKSQIVMLEASAENILQQDFCHAIKVGVKYTQQIIQGIQQLVKEIGVAKRTPQKIFTPLPDIVKHAHNLAMEKLYAVFTDYKHDKVSRDEAVNKIRLDTEEQLKEKFPEADPYEIMESFNVVSKEVFRSIILNEYKRCDGRDLTSLRNISCEVDMFKTLHGSALFQRGQTQVLCTVTFDSLESSIKSDQIITAINGIKDKNFMLHYEFPPYATNETGKVTGINRRELGHGALADKALYPVIPKDFPFTIRVTSEVLESNGSSSMASACGGSLALMDAGVPVSSAVAGVAIGLITKINPEKGEIEDYRLLTDILGIEDYNGDMDFKIAGTNKGITALQADIKLPGIPIKIVMEAIQQASVAKREILQIMNKTISKPRGSRKENGPVVETVEIPLSKRAKFVGPGGYHLKRLQAETGVTISQVDEETYSVFAPTPSAMHEAREFITEICKDDQEYQLEFGAVYTATITEIRDSGVMVKLYPNMTAVLLHNTQLDQRKIKHPTALGLEVGQEIQVKYFGRDPADGRMRLSRKVLQSPATSLVKTLSDRNSVMMRESISQSSSNSSG