Details from NCBI annotation

Gene Symbol Efemp1
Gene Name EGF containing fibulin-like extracellular matrix protein 1
Entrez Gene ID 101705517

This gene is present in the GenAge database and has been identified as potentially important to ageing in humans.

Database interlinks

Part of NW_004624833.1 (Scaffold)

For more information consult the page for NW_004624833.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

EFEMP1 ENSCPOG00000002568 (Guinea pig)

Gene Details

EGF containing fibulin-like extracellular matrix protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002335, Guinea pig)

Protein Percentage 85.37%
CDS Percentage 87.67%
Ka/Ks Ratio 0.30256 (Ka = 0.0909, Ks = 0.3003)

EFEMP1 ENSG00000115380 (Human)

Gene Details

EGF containing fibulin-like extracellular matrix protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000378058, Human)

Protein Percentage 90.47%
CDS Percentage 91.08%
Ka/Ks Ratio 0.16849 (Ka = 0.045, Ks = 0.2669)

Efemp1 ENSMUSG00000020467 (Mouse)

Gene Details

epidermal growth factor-containing fibulin-like extracellular matrix protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000020759, Mouse)

Protein Percentage 89.66%
CDS Percentage 88.17%
Ka/Ks Ratio 0.11823 (Ka = 0.0511, Ks = 0.4321)

Efemp1 ENSRNOG00000003553 (Rat)

Gene Details

EGF-containing fibulin-like extracellular matrix protein 1 (Efemp1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000004764, Rat)

Protein Percentage 89.05%
CDS Percentage 86.95%
Ka/Ks Ratio 0.11526 (Ka = 0.0555, Ks = 0.4818)

Genome Location

Sequence Coding sequence

Length: 1485 bp    Location: 5654825..5722185   Strand: +
>XM_004867256.1
ATGATGTGGAAAGTCCTTTTCCTAACTATGCTGACTCTGGCACTGGTCAAGTCACAGGACAATGAAGAAACCATCACATACACGCAATGCACTGATGGATATGAGTGGGACCCCATACGACAGCAGTGCAAAGATATTGATGAATGTGACATTGTCCCAGATGCTTGCAAAGGTGGAATGAAATGTGTCAACCACTATGGAGGATACCTCTGTCTTCCTAAAACAGCCCAAATTATTGTCAATAATGAACAACCTCAGCAAGAAACACCAGCAGCTGAAGCATCCTCAGGTGGCGCCACTGGGGGGATTTCTGCCAGTAGCATGGCAGCCAGTGGAGTGGTGCCTGGGGGTGGTTTTGTGGCTAGTGCTGCTGCAGTTGTAGGCCCTGAAGTGCAGACTGGCCGAAATAACTTTGTCATCCGACGGAACCCAGCTGACCCTCAGCGCATTCCCTCCAACCCTTCCCACCGGATCCCGTGTGCAGCAGGCTATGAGCAGAGTGAACATAACGTGTGTCAGGACATTGATGAGTGCACTGCAGGGATGCACAACTGCAGAGCAGACCAAGTGTGCATCAATTTACGGGGCTCCTTCACGTGTCAGTGCCCTGCAGGGTACCAGAAGCGGGGAGAGCAGTGTGTAGACATAGATGAATGCGCTGTGCCTCCATATTGCCACCAAAGATGTGTGAACACACCAGGCTCATTTTATTGCCAGTGCAGCCCTGGGTTTCTGTTGGCAGCAAACAACTACTCCTGTGTAGATATAAATGAATGTGATGCCAGCAACCAATGTGCTCAGCAGTGCTACAACATTGTTGGCTCATTCATCTGTCAGTGTAATCAAGGATATGAGCTGAGCAGTGACAGGCTCAACTGTGAAGACATTGATGAATGCAGAACCTCAAACTACCTGTGTCAATACCAATGTGTCAACGAACCTGGGACATTCTCGTGTATGTGCCCCCAGGGATACCAAGTAGTGGGAGGTAGAACATGTCAAGATATAAACGAATGTGAAACAACCAATGAATGCCGAGAGGATGAAATGTGTTGGAATTATCATGGTGGCTTCCGTTGTTATCCACGAAATCCTTGTCAAGATCCCTACATTCTAACACCAGATAACCGATGTGTTTGCCCAGTTTCAAATGCTATGTGCCTAGATCTGCCCCAGTCCATACTCCACAAATACATGAGCATCAGATCTGACAGGGCTGTACCATCAGACATCTACCAGATACAGGCCACAAGTGTCTATACCAACACCATCAATACTTTTCGGATTAAATCTGGAAATGAAAACGGAGAGTTCTACCTAAGACAAACAAGTGCTGCAAGTGCAATGCTTGTGCTGGTGAAGTCACTAACAGGACCAAGGGAATACATCGTGGACATGGAGATGCTGACAGTCAACAGAATAGGGACCTTCCGCACCAGCTCAGTGTTAAGATTGACAATAATAGTGGGGCCATTTTCATTTTAG

Related Sequences

XP_004867313.1 Protein

Efemp1 PREDICTED: EGF-containing fibulin-like extracellular matrix protein 1 [Heterocephalus glaber]

Length: 494 aa      View alignments
>XP_004867313.1
MMWKVLFLTMLTLALVKSQDNEETITYTQCTDGYEWDPIRQQCKDIDECDIVPDACKGGMKCVNHYGGYLCLPKTAQIIVNNEQPQQETPAAEASSGGATGGISASSMAASGVVPGGGFVASAAAVVGPEVQTGRNNFVIRRNPADPQRIPSNPSHRIPCAAGYEQSEHNVCQDIDECTAGMHNCRADQVCINLRGSFTCQCPAGYQKRGEQCVDIDECAVPPYCHQRCVNTPGSFYCQCSPGFLLAANNYSCVDINECDASNQCAQQCYNIVGSFICQCNQGYELSSDRLNCEDIDECRTSNYLCQYQCVNEPGTFSCMCPQGYQVVGGRTCQDINECETTNECREDEMCWNYHGGFRCYPRNPCQDPYILTPDNRCVCPVSNAMCLDLPQSILHKYMSIRSDRAVPSDIYQIQATSVYTNTINTFRIKSGNENGEFYLRQTSAASAMLVLVKSLTGPREYIVDMEMLTVNRIGTFRTSSVLRLTIIVGPFSF