Details from NCBI annotation

Gene Symbol Sorcs1
Gene Name sortilin-related VPS10 domain containing receptor 1
Entrez Gene ID 101720277

Database interlinks

Part of NW_004624831.1 (Scaffold)

For more information consult the page for NW_004624831.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SORCS1 ENSCPOG00000012755 (Guinea pig)

Gene Details

sortilin-related VPS10 domain containing receptor 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011477, Guinea pig)

Protein Percentage 93.32%
CDS Percentage 89.68%
Ka/Ks Ratio 0.07771 (Ka = 0.0355, Ks = 0.4564)

SORCS1 ENSG00000108018 (Human)

Gene Details

sortilin-related VPS10 domain containing receptor 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000345964, Human)

Protein Percentage 91.54%
CDS Percentage 86.74%
Ka/Ks Ratio 0.07559 (Ka = 0.0449, Ks = 0.5939)

Sorcs1 ENSMUSG00000043531 (Mouse)

Gene Details

VPS10 domain receptor protein SORCS 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000072472, Mouse)

Protein Percentage 86.3%
CDS Percentage 80.92%
Ka/Ks Ratio 0.10452 (Ka = 0.0916, Ks = 0.8764)

Sorcs1 ENSRNOG00000011313 (Rat)

Gene Details

VPS10 domain receptor protein SORCS 1

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000015979, Rat)

Protein Percentage 88.57%
CDS Percentage 81.81%
Ka/Ks Ratio 0.081 (Ka = 0.0734, Ks = 0.9062)

Genome Location

Sequence Coding sequence

Length: 3480 bp    Location: 5901801..5431960   Strand: -
>XM_004866520.1
ATGGGAAAAGTTGGCGCCAGCAGCGGCCCGGCCGGCTGGGGCGCACTGCTGGCCGCGGGGCTGCTGCTCCTGAACGCCGCCAGCTCCGCGCCGCCCCCTGGCCCGGCCCCGCGCCCTGTCCTGGCCGTGGCCCCCGGGCACCGCGCGCTGGCCCTGGAGCGGGCCTGGGGCTCGGGGGCGGCGGCGGGGCCCGGGCGCTCTGGCCGGAGCAGACGGAGCGGGTCGGACGCGGAGGAGGCCGGCGGCGGCGGGGACGCGGGCGGGAGCCCCGGGGCCGCGCGCAAGGACGGGGCAGCCGAGCCCGGGGCCGGGCAGTCGGACCCGCGCGGGGCGCCCCGCTTCCGGACGGAGGAGCTGAGGCTGAGCAGCACCACTTTCGCGCTGGCCGGGGACTCCGCGCACAACCAAGCCATGGTGCACTGGTCCGGGCACAACAGCAGCGTGATTCTCATTCTGACAAAGCTGTATGACTATAACCTGGGCAGCATCACCGAGAGCTCACTGTGGAGGTCAACCGATTACGGGACAACTTATGAGAAGCTGAATGATAAAGTGGGTTTGAAGACAATTTTGAGCTATCTCTATGTGTGTCCTACCAACAAACGTAAGATCATGCTGCTCACAGACCCAGAGATTGAGAGCAGCGTATTGATCAGCTCCGACGAAGGGGCCACCTATCAGAAGTACCGGCTGAACTTCTACATTCAGAGCCTGCTCTTCCACCCGAAACAGGAAGACTGGATTCTGGCCTACAGTCAGGACCAGAAGCTCTACAGCTCTGCTGAATTTGGGAGAAGATGGCAGCTTATCCAGGAAGGGGTGGTGCCGAACAGGTTCTACTGGTCCGTGATGGGGTCGAACAAGGAACCAGACCTGGTGCATCTTGAGGCCAGAACCATGGACGGTCATTCACAATATCTAACTTGCAGAATGCAGAACTGCACTGAAACCAACAAAAATAAACCTTTCCCGGGCTACATCGACCCAGACTCTCTGATTGTCCAGGATGACTATGTGTTTGTTCAGCTGACATCGGGGGGAAGACCACATTACTATGTGTCCTACCGAAGGAACGCCTTTGCACAAATGAAGCTTCCGAAATACGCCCTGCCCAAGGACATGCACGTCATCAGCACAGATGAGAACCAAGTGTTTGCAGCTGTCCAAGAGTGGAACCAGAATGACACATACAATCTCTACATCTCAGACACACGGGGCATCTACTTCACCCTGGCCTTGGAGAATGTCCAGAGCAGCAGAGGCCCTGAGGGCAATGTCATGATTGACCTCTATGAGGTAGCAGGGATAAAGGGAATGTTCTTGGCTAACAAGAAGATTGACCAGCAAGTGAAGACTTTCATCACATACAACAAAGGCCGCGACTGGCGCTTGCTGCAGGCACCGGACACAGACCTCAGGGGAGTCGCCGTGCACTGTCTGCTGCCCTATTGCTCACTGCACCTTCACCTGAAGGTCTCTGAGAATCCCTACACATCTGGGATCATTGCCAGCAGAGATACAGCTCCAAGCATCATAGTTGCTTCAGGTAATACAGGTTCGGAATTGTCCGACAACGACATCAGCATGTTTGTCTCTTCAGATGCAGGGAACACTTGGAGGCAGATCTTTGAAGAAGAGCACAGTGTCTTGTACCTTGATCAAGGCGGAGTCCTGGTTGCTATGAAACACACGTCTCTCCCGATTCGACATCTTTGGTTGAGTTTCGATGAAGGGAATTCCTGGAGCAAATACAGTTTCACTTCCATTCCGCTCTTTGTGGACGGGGTCCTGGGGGAGCCCGGAGAAGAGACTCTGATCATGACAGTGTTTGGGCACTTCAGCCACCGCTCTGAGTGGCAGCTGGTCAAAGTCGACTACAAGTCCATTTTCGACAGACGGTGTGCCCAGGAGGACTACAGACCGTGGAAGTTACACAGCCAGGGAGAGGCATGCATCATGGGAGCCAAAAGGACATACAAGAAGCGGAAATCAGAGCGGAAGTGTATGCAGGGGAAATACGCAGGAGCCATGGAATCGGAACCCTGTGTCTGCACAGAGGCGGATTTTGACTGTGACTATGGCTATGAGAGGCACAGCAACGGGCAGTGCCTGCCTGCCTTCTGGTTCAATCCATCCTCTCTGTCAAAGGACTGCAGTGTCGGGCAGAGCTACCTGAACAGCACTGGGTACAGAAAGGTGGTGTCCAATAACTGCACAGACGGAGTGAGAGAGCAGTACACTGCCAAACCCCAGAAGTGTCCCGGCAAGGCCCCTCGAGGGCTGCGGATCATCACTGCCGACGGGAAGCTGACAGCAGAACAAGGCCACAACGTCACCCTGCTGGTGCAGCTGGAGGAGGGTGACGTCCAGAGGACGCTCATCCAGTTGGACTTCGGTGATGGCATTGCGGTGTCTTACGTCAACCTGAGCTCCATGGAGGATGGCATCAAGCACGTGTACCAGAACGTGGGCATCTTCCGAGTGACCGTGCAGGTGGACAACAGGCTGGGGTCCGCCAGCGCCGTGCTGTACTTACATGTAACTTGTCCCCTGGAGCACGTGCACCTTTCCCTTCCCTTCGTTACCACAAAGAACAAAGAGGTCAACGCGACGGCAGTGCTGTGGCCCAGCCAGGTGGGAACCCTCACCTACGTGTGGTGGTACGGAAACAACACGGAGCCCTTGATCACCTTGGAGGGAAGCATATCGTTCAAGTTCACTTCAGAGGGAATGAACACCATCACAGTGCAGGTCTCCGCTGGGAATGCCATCCTGCAGGACACGAAGACCATCGCAGTGTATGAGGAGTTCCGCTCCCTCCGCCTGTCCTTTTCTCCAAACCTGGACGACTACAACCCGGACATCCCCGAGTGGAGGCGGGACATCGGCCGTGTCATCCAAAAGTCCCTGGTGGAGGCTACTGGAGTCCCGAGCCAGCACATCCTGGTGGCCGTGCTGCCTGGCCTGCCCACTGCTGCGGAGCTCTTTGTTTTGCCCTATGAGGACCCAGCGGGAGAGAGTGGGAGGTCCCCAGAGGGCCTGGAGCAGATATCAGAAGTCCTGATCCACAAGCTCAACCAGAACTCCGTGCACTTCGAGCTGAAGCCTGGGGTCCAAGTTCTGGTCCACGCAGCTCACTTGACAGCAGCCCCCCTGGTGGACCTCACCCCGACCCACAGTGGATCCGCCATGCTGATGCTGCTCTCCGTGGTGTTCGTGGGCCTGGCTGTGTTCGTCATCTACAAGTTTAAGAGGAAGATCCCGGGAATTAATGTTTATGCCCAGATGCAGAATGAGAAGGAACAAGAGATGCTCAGTCCAGGCAGTCACACTGAAAGCAGGCCCGGTGTCCCTCACACTGAACTGAGGAGGCCTGGTCAGCTTGTAGATGAGAAGGTGCAGCCACAGCTCATAGGAAGTATTTCCATAGTTGCTGAGAATCAAAGCACAAAAGAAATCCCTACCTATGTAAATGTTTGA

Related Sequences

XP_004866577.1 Protein

Sorcs1 PREDICTED: VPS10 domain-containing receptor SorCS1-like [Heterocephalus glaber]

Length: 1159 aa      View alignments
>XP_004866577.1
MGKVGASSGPAGWGALLAAGLLLLNAASSAPPPGPAPRPVLAVAPGHRALALERAWGSGAAAGPGRSGRSRRSGSDAEEAGGGGDAGGSPGAARKDGAAEPGAGQSDPRGAPRFRTEELRLSSTTFALAGDSAHNQAMVHWSGHNSSVILILTKLYDYNLGSITESSLWRSTDYGTTYEKLNDKVGLKTILSYLYVCPTNKRKIMLLTDPEIESSVLISSDEGATYQKYRLNFYIQSLLFHPKQEDWILAYSQDQKLYSSAEFGRRWQLIQEGVVPNRFYWSVMGSNKEPDLVHLEARTMDGHSQYLTCRMQNCTETNKNKPFPGYIDPDSLIVQDDYVFVQLTSGGRPHYYVSYRRNAFAQMKLPKYALPKDMHVISTDENQVFAAVQEWNQNDTYNLYISDTRGIYFTLALENVQSSRGPEGNVMIDLYEVAGIKGMFLANKKIDQQVKTFITYNKGRDWRLLQAPDTDLRGVAVHCLLPYCSLHLHLKVSENPYTSGIIASRDTAPSIIVASGNTGSELSDNDISMFVSSDAGNTWRQIFEEEHSVLYLDQGGVLVAMKHTSLPIRHLWLSFDEGNSWSKYSFTSIPLFVDGVLGEPGEETLIMTVFGHFSHRSEWQLVKVDYKSIFDRRCAQEDYRPWKLHSQGEACIMGAKRTYKKRKSERKCMQGKYAGAMESEPCVCTEADFDCDYGYERHSNGQCLPAFWFNPSSLSKDCSVGQSYLNSTGYRKVVSNNCTDGVREQYTAKPQKCPGKAPRGLRIITADGKLTAEQGHNVTLLVQLEEGDVQRTLIQLDFGDGIAVSYVNLSSMEDGIKHVYQNVGIFRVTVQVDNRLGSASAVLYLHVTCPLEHVHLSLPFVTTKNKEVNATAVLWPSQVGTLTYVWWYGNNTEPLITLEGSISFKFTSEGMNTITVQVSAGNAILQDTKTIAVYEEFRSLRLSFSPNLDDYNPDIPEWRRDIGRVIQKSLVEATGVPSQHILVAVLPGLPTAAELFVLPYEDPAGESGRSPEGLEQISEVLIHKLNQNSVHFELKPGVQVLVHAAHLTAAPLVDLTPTHSGSAMLMLLSVVFVGLAVFVIYKFKRKIPGINVYAQMQNEKEQEMLSPGSHTESRPGVPHTELRRPGQLVDEKVQPQLIGSISIVAENQSTKEIPTYVNV