Sequence details NCBI ID: XM_004866518.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Pcgf6
Gene Name polycomb group ring finger 6
Entrez Gene ID 101718547

Database interlinks

Part of NW_004624831.1 (Scaffold)

For more information consult the page for NW_004624831.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PCGF6 ENSCPOG00000004021 (Guinea pig)

Gene Details

polycomb group ring finger 6

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003627, Guinea pig)

Protein Percentage 90.58%
CDS Percentage 91.19%
Ka/Ks Ratio 0.2203 (Ka = 0.0513, Ks = 0.2329)

PCGF6 ENSG00000156374 (Human)

Gene Details

polycomb group ring finger 6

External Links

Gene Match (Ensembl Protein ID: ENSP00000358862, Human)

Protein Percentage 88.25%
CDS Percentage 88.16%
Ka/Ks Ratio 0.20244 (Ka = 0.0672, Ks = 0.3317)

Pcgf6 ENSMUSG00000025050 (Mouse)

Gene Details

polycomb group ring finger 6

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000026032, Mouse)

Protein Percentage 85.1%
CDS Percentage 83.67%
Ka/Ks Ratio 0.17124 (Ka = 0.0935, Ks = 0.5463)

Genome Location

Sequence Coding sequence

Length: 1059 bp    Location: 2587576..2550506   Strand: -
Raw sequence   
>XM_004866518.1
ATGGAGGGGGTCAATTTGGGGCCGGTCGGCCACGCGGACGCCAACGAGGCCGAGGGCGCCGCCGCCCCGTCGCCCCCGCCGCCGGCCTCCCCTCCTGCCCTCGTCCGGGCGCCCGCCGCGGGTGAGGACGGCCCGGCCCCTCAGCCTGAGGCGGGAGCACCCGGCTGCTCCGGCGCCCGCCCCCCCGAGCTGCTGCCCGAGCGCTGCCTGGGCCGCTTGAAAGGTCGCTTCGAGGAGGACGACGAGGAGCTGGAGGATGAGGAGCTCGAGGAGGAGGAGGAAGAGGAGGAGGAAGAAATGAGCCATTTCTCGCTGAGGCTGGAGGGGGGCCGGCCGGACTCGGAGGACGAGGACGAGGACGAGGAGCGCCTGATTAATCTCACCGAGCTGACCCCATACATCCTGTGTTCCATTTGCAAGGGTTACCTAATAGATGCAACTACCATTACAGAATGCCTTCATACCTTTTGTAAAAGCTGCATTGTAAGACATTTTTACTATAGCAACAGATGTCCAAAATGCAACATAGTAGTACATCAGACACAACCTCTTTATAACATAAGGTTGGACCGACAGTTGCAAGACATAGTGTACAAATTAGTGATCAATCTAGAGGAAAGAGAGAAAAAGCAAATGCATGATTTCTATAAAGAAAGAGGTCTAGAAGTACCTAAACCTGCTGTGCCACAGACAGCCCCTTCAAACAAAGGAAGAACTAAGAAAGTCCTAGAATCAGTGTTTCGTATTCCACCTGAACTAGATATGTCTTTATTACTGGAATTCATTGGTGCTAATGAAGGCACAGGACATTTTAAGCCATTAGAAAAGAAGTTTGTCCGAGTTTCAGGAGAAGCAACTATTGGGCATGTAGAAAAATTCCTCAGAAGAAAAATGAGTCTTGATCCGGCCTGTCAGGTGGACATCCTCTGTGGCGACCACTTGCTGGAGCGGTGCCAGACTCTGAGGGAGATCCGGCGGGCAGCTGGGGAAGCGGCTATGCAGGATGGTCTGCTTGTTCTTCATTATGGTCTTGTGGTTTCTCCTCTGAAAATAACTTGA

Related Sequences

XP_004866575.1 Protein

Pcgf6 PREDICTED: polycomb group RING finger protein 6 [Heterocephalus glaber]

Length: 352 aa      View alignments
>XP_004866575.1
MEGVNLGPVGHADANEAEGAAAPSPPPPASPPALVRAPAAGEDGPAPQPEAGAPGCSGARPPELLPERCLGRLKGRFEEDDEELEDEELEEEEEEEEEEMSHFSLRLEGGRPDSEDEDEDEERLINLTELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQTQPLYNIRLDRQLQDIVYKLVINLEEREKKQMHDFYKERGLEVPKPAVPQTAPSNKGRTKKVLESVFRIPPELDMSLLLEFIGANEGTGHFKPLEKKFVRVSGEATIGHVEKFLRRKMSLDPACQVDILCGDHLLERCQTLREIRRAAGEAAMQDGLLVLHYGLVVSPLKIT