Sequence details NCBI ID: XM_004866481.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Pdcd11
Gene Name programmed cell death 11
Entrez Gene ID 101705263

Database interlinks

Part of NW_004624831.1 (Scaffold)

For more information consult the page for NW_004624831.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PDCD11 ENSCPOG00000010957 (Guinea pig)

Gene Details

programmed cell death 11

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009846, Guinea pig)

Protein Percentage 83.07%
CDS Percentage 85.55%
Ka/Ks Ratio 0.23531 (Ka = 0.0986, Ks = 0.4192)

PDCD11 ENSG00000148843 (Human)

Gene Details

programmed cell death 11

External Links

Gene Match (Ensembl Protein ID: ENSP00000358812, Human)

Protein Percentage 83.11%
CDS Percentage 85.18%
Ka/Ks Ratio 0.19327 (Ka = 0.0924, Ks = 0.4781)

Pdcd11 ENSMUSG00000025047 (Mouse)

Gene Details

programmed cell death 11

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000072008, Mouse)

Protein Percentage 78.01%
CDS Percentage 80.26%
Ka/Ks Ratio 0.16827 (Ka = 0.1295, Ks = 0.7695)

Pdcd11 ENSRNOG00000020304 (Rat)

Gene Details

programmed cell death 11 (Pdcd11), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000027512, Rat)

Protein Percentage 78.34%
CDS Percentage 80.59%
Ka/Ks Ratio 0.17778 (Ka = 0.1288, Ks = 0.7246)

Genome Location

Sequence Coding sequence

Length: 5610 bp    Location: 2633244..2673748   Strand: +
Raw sequence   
>XM_004866481.1
ATGGCAGCCCTAGAAGAAAACTTTCCGCGAGGGGGTACAAGAAAGATCCACAAGTCAGAGAAATCTTACCAGCAGTTAGTTGAACATGACAACTTATTTGACATTTCCAATGAAGAAGAATCCACCAAAAGGAAAAAGAACCAGAAAGGCCCAGCAAAAACAAAAAAGTTGAAAATTGAGAAGAGAGAAGGGGGCAAGTCTGTAAAAGAGAAGCTTGAAATCCTTAGCGTTGAGTCCCTATGTGAAGGAATGCGGATTTTGGGTTGTGTCAAAGAGGTAAATGAGCTGGAACTGGTGATCAGTCTCCCCAATGGCCTCCAGGGGTTTGTGCAAGTGACTGAAATCTGTGATGCCTACACCAAAAAGCTGAATGAGCAGGTGGCTCAAGAAGAACCTCTGAAGGACCTACTCCGTTTGCCTGAACTTTTCTCACCTGGAATGCTGGTGAGATGTGTGGTAAGCAGTGTGAGCATCACAGAGAGAGGCAAAAAGAGTGTCAAGCTCTCTCTGAACCCCAAAAATGTGAACAGAGTGCTGAGTGCTGAGGCCCTGAAGCCTGGCATGCTGCTGACAGGTACCGTGTCCAGCCTGGAAGATCATGGCTACCTAGTGGACATTGGTGTTGTCGGGACCAGAGCTTTTCTGCCGCTGCAGAAAGCCCAGGAATACATCCGACAGAAGAACAAAGGTGCTAAATTGAAAGTGGGTCAATACCTGAACTGCATCATTGAGGAGGTGAAAAGCAGTGGAGGAGTTGCTAGCCTGTCCATAGAGCAGTCAGCGATTTCTACTGCCATTGCTACCCAGGAGCAAAACTGGAGTCTTAACAACTTGCTTCCAGGACTAGTGGTCAAAGCCCAGGTACAGAAGGTGACTCAGTTTGGCCTTACCCTGAACTTCCTCACGTTCTTCACCGGCCTGGTCGACTTCATGCATCTGGATTCCAAGAAAGTTGGAACATATTTCTCAAACCAAGCAGTGAGGGCCTGCATCCTCTGTGTGCATCCTCGGACCAGAGCTGTGCGCCTGAGCCTGCGCCCCATCTTCTTGCAGCCTGGACGCCCACTCACCCAGCTCTCTTGCCAGCACCTTGGAGCTGTGATGAAAGATGTCCCTGTCCAGGGCTTTTTCAACAAGGCAGGGGCCACCTTCAAGCTGAAGGACGGGGCTCTGGCCTATGCCCGGCTCAGCCATCTCTCTGATTCTAAGAATGCCTTCAGACCCGAGACTTTCAAGCCAGGGAACATGCACAAGTGCAGAATTACTGACTACAGCCCGATGGACGGGCTGGCCCTGCTCTCTCTGCGGACGTCTGTTATTGAAGCTCAGTACCTTAGATATCATGATATCAAAACTGGGGCGGTGGTGAAGGGCACAGTGCTGACCATGAGGCCATTTGGGATGCTGGTGAAGGTGGGTGAGCAAGTGAGGGGTCTGGTGCCTGCCACGCACCTGGCCGACATCCTGATGAAGAACCCAGAGAAGAAGTACCAGGTCGGCGCCGAGGTCAAGTGCCGGGTTTTACTTTGTGACCCTGAAGCTAAGCAGCTGATCATGACCCTGAAGAAAACTCTGGTTACATCCAAACTGCCTGTTATTACTTGCTATGAAGATGCCAAGCCTGGTCTGCAGACCCATGGCGTCATCCACAGGGCCAAGGACTACGGCTGCATCGTGAGGTTCTACAACGACGTGCAGGGACTGGTGCCCAAGCATGAGCTTGGCGCCCAGTGTATCCCTGACCCGGAGAAGGCCTTCTACGCTGGCCAGGTGGTGAAGGTTGCTGTACTGAACTGTGAGCCAGCCAAAGAAAGGATGCTCTTATCCTTCAAGCTGTTGAGTGATCCAGAGCCAAAGAATGAGCGTGTGGGATGTGGTCAGAAGAAAAGAAAAGATGTTGGTGTTGGGCAGTTGGTGGATGTGAAGGTTTTGGAGAAGACCAAAGATGGGCTGCAGGTGGCTGTGCTGCCCCACAACATCCCTGCTTTCCTCCCCACCCCTCACCTGTCAGACCACGTCGCCAATGGCCCACTGGTGCACCGCTGGCTGCAGGCAGGTGACACACTTCACCGGGTGCTGTGTCTGAGCCAGAGCGAGAGACAGGTTCTACTCTGTAGGAAGCCAGCTTTGGTCTCCTCAGTAGAAGCCGGCCAGGATCCCAAGAGCTTCTCAGAAATCCAGCCGGGAATGCTGCTTGTTGGTTTTGTGAAGAGCATCAAGGACTATGGTGTGTTTGTCCAGTTCCCCTCTGGTCTGAGTGGGCTGGCTCCCAAAGCAATCATGAGTGACAAGTTTGTGACGAACCCGAGTGACCACTTTGTCGAGGGGCAGACAGTGGTGGCGAAGGTGACCAACGTGGACGAGGAGAAGCAGCGGATGCTGCTGTCGCTGCGGCTCTCAGACTGCAGGCTGGGAGGCCCGGCGAGTGGCAGCCTGCTGCTCCTGAGCCAGTGCCTGGAGGAGTTGCAGGGCGTGCGCAGCCTCATGAGCAGCCGAGACTCTGTGCTGGTCCAGGCCCTGGCCGAGATGACCCCGGGAATGGTCCTGAACCTAGTGGTGCAGGAAGTGTCGGAGGACGGTTCTGTGGTGTTCACCGGGGCTCCAGTTCGAGACCTGGTCCTGAGGGCCAGCAGATACCATCGAGCAGGGCAGGAGGTGGAATCTGGGCAGAAGAAGAAGGCTGTCATCCTCTATGTTGACATGTTGGGATTAGAGGTCCATGTGTCCCTCCGCAAGGAGTTAGTGAATAGAAAAGCTTGGAAGCTGAAGAAAGGCAGCGTACACCAGGCCACTGTGCAGCACTTGGAGGAGTCCTTCGCGGTGGCCTCCGTGGGGGAGACTGGCCATCTGGTGGCCTTCTCCCTGGCCTCTCACCTCAACGACACATTCCGCTTTGACTCGGAGAAGTTGCAGGTGGGACAGAGCGTCTGCCTGGTCCTCAAGACTGCGGAGCCGGGAGTGACTGGTCTTCTCTTGGCTGTCGAGGGGCCGGCTGCCAGGAGGGTCCTGAGACAGCCCTGCAAGGACTCGGAGATGGGGGACGAGGGTGAGGGGGCCGACCCAGCTCTGGCAGCAGGGCCTAGAAAGAAGCACGGGCTGGCCATTGGGGATGTGGTCACCGGGACGGTGAAGTCTGTTAAGCCAACCCATGTGGTTGTGACCTTGGAGGATGGCGTGATGGGCTGCGTCCACGCCTCCCACGTCCTGGATGAGGTTCCCGAGGGCGCCGCTCCCACTGCCACGCTGAAGGTCGGGAAGACGGTGACAGCGCGAGTGATCGGCGGGCGAGACGTGAAGACATTTAAGTTCCTCCCAATAAGTCACCCTAGATTCATTCGAACCGTCCCGGAGCTGAGTGTTCGGCCAAGTGAGCTGGAGAAGGATGGCCACACCGTGCTGAACACTTACTCAGCCAGCCCTGTGGAGAAGATTCAGCAGTACCGGGCTGGTCAGACTGTGACTTGCTTCTTAAAGAAGTACAATGTGGTTAAGAAATGGCTTGAAGTGGAGATTGCACCGGACATCCGGGGGAGAATTCCTTTGTTGCTCACATCTCTCAGCTTCAAGGTTCTGAAACATCCAGATAAGAAGTTCCAGATTGGCCAGGCCTTGAGGGCCACCGTGGTCGGCCCAGATTCCTCCAAGCCTTTCTTGTGTCTCTCACTCATAGGTCCACACAAGCTCAAGAAGGGAGAAGTGGCCATGGGCCGGGTGGTGAAAGTGTCGCCCAGTGAGGGTTTGACGGTGGCCTTCCCCTTTGGGAGGACGGGGACGGTGAGCGTATTCCACGTGAGTGACTCCTACTCTGAGAGACCCCTGCAGGACTTCAGCCCCCAGAAGGTTGTCAGATGCTATGTCCTGTCCACTGCAAACCATGTATTGACTTTGTCACTGCGACTGTCCAGGACGAACCCTGAGACGAAAAGCAAAGTAGAAGACCCAGAGATCAACTCCATCCTGGACATTAAGGAGGGGCAGCTTCTGCGGGGCTTCGTGCGGTCCGTGGAGCCGAGCGGTGTGCTCCTGGGCCTCGGGCCCTCGGTTGAGGGTTTGGCCCGGTTCTCACATGTGTCCCAGTGCAGCCTGCCCAAGAAGGGCCTCTACAGCAAATACCTCCCTGAAGGGAGGCTGCTCACCGCCAGGGTCTTGAGGCTAGACCCCAGCAAGAACCTGGTAGAGTTGTCCTTCCTCCCCGGTGACACTGGCAAGCCAGATGTGATGTCTGTCTCCCCGGAACTTCTGGTTCAGAAGCAAGAGGAGGACGTAGAGGTCAAGGAGAGGGACAGAAAGGGAGAAAAGAAGAGGAGTCCGAAAAGGAAAGAGAAGAAGAACCAGAAGGGGCAAGAGGAGGGGGAGCTGCCCAGCAAGGAGCAGGTCAGGGCAAAGCGGCCTGGCAAGCGGGAGCGCCTGGGCTCGGAGGGAGCGCAGGAGAGCGCGAACAAGAGGCGGAAGAAGGCTGGGCCCCCGGAGGAGGAAGACAGTGGCGTGGAAGTGTACTATCGGGAGGGAGCCGAGGAGGAGGCGGCGGAGGCAGAGGTGCTGCCCACGGGGACGCTGACCAAGCCTGCAGAAGTGCCCCGGCTGCGACTCTCGTCAGGCTTCTTTTGGGACGTGGGGCTCGACACTCTGACCCCGGCCTTACCGCCCCGAGGAGAGAACTCCGACAGCGAGGAGGATGAGAAGCCACCCCACGCCACGCAGCAGAAGAAAAGCAAGAAGGAAAGGGAGTTGGAGAAACAGAAGGCAGAGAAAGAGCTGTCCCGCATTGAGGAGGCGCTCAGGGACCCTGGGCGGCAGCCGGAGTCTGCAGATGACTTCGACCGCCTGGTGCTGAGCTCCCCCAGCAGCTCCATCCTGTGGCTGCAGTACATGGCCTTCCACCTGCAGGCCACGGAGATTGACAAGGCCCGGGCAGTGGCCGAGAGGGCCCTGAGGACCATCTCCTTCAGAGAGGAGCAAGAGAAGCTGAACGTGTGGGTGGCGCTGCTGAACCTGGAAAACATGTATGGCTCTCCTGAGTCCCTGAGCAAGGTCTTCGAGCGCGCCGTGCAGTACAACGAGCCTCTCAAGGTCTTTCTCCACCTGGCCGACATCTATGCCAAGTCCGAGAAGTTCCAGGAAGCTGGGGAGCTGTATAACCGTATGCTGAAGCGCTTCCGGCAGGAGAAATCTGTCTGGATCAAATACGGGGCCTTTCTTCTCCGGAGGGGCCAGGCCGGGGCCAGTCACCGCGTGCTGCAGCGAGCCCTCGAGTGCCTGCCTGCCAAGGAGCACATGGATGTCATCACCAAGTTTGCCCAGCTGGAGTTCCAGCTGGGAGATGCAGAGCGGGCCAGAGCCATTTTTGAAAACATGCTGAGCACCTACCCAAAGCGCACTGATATCTGGTCGGTGTACATTGACATGACCATCAAGCACGGCAGCCAGAAGGAAGTCCGGGACATCTTTGAGCGGGTTATCCACCTGAACTTGGCCCCCAAGAAGATGAAGTTCTTCTTCAAGCGCTACCTGGACTATGAGAAGCAGCACGGCTCTGAGAAGGACGTGCGGGCGGTGAAAGCGAAGGCCTTGGAGTATGTGGAGGCCAGGAGCTCTGTGCTGGAGGACTAG

Related Sequences

XP_004866538.1 Protein

Pdcd11 PREDICTED: protein RRP5 homolog [Heterocephalus glaber]

Length: 1869 aa      View alignments
>XP_004866538.1
MAALEENFPRGGTRKIHKSEKSYQQLVEHDNLFDISNEEESTKRKKNQKGPAKTKKLKIEKREGGKSVKEKLEILSVESLCEGMRILGCVKEVNELELVISLPNGLQGFVQVTEICDAYTKKLNEQVAQEEPLKDLLRLPELFSPGMLVRCVVSSVSITERGKKSVKLSLNPKNVNRVLSAEALKPGMLLTGTVSSLEDHGYLVDIGVVGTRAFLPLQKAQEYIRQKNKGAKLKVGQYLNCIIEEVKSSGGVASLSIEQSAISTAIATQEQNWSLNNLLPGLVVKAQVQKVTQFGLTLNFLTFFTGLVDFMHLDSKKVGTYFSNQAVRACILCVHPRTRAVRLSLRPIFLQPGRPLTQLSCQHLGAVMKDVPVQGFFNKAGATFKLKDGALAYARLSHLSDSKNAFRPETFKPGNMHKCRITDYSPMDGLALLSLRTSVIEAQYLRYHDIKTGAVVKGTVLTMRPFGMLVKVGEQVRGLVPATHLADILMKNPEKKYQVGAEVKCRVLLCDPEAKQLIMTLKKTLVTSKLPVITCYEDAKPGLQTHGVIHRAKDYGCIVRFYNDVQGLVPKHELGAQCIPDPEKAFYAGQVVKVAVLNCEPAKERMLLSFKLLSDPEPKNERVGCGQKKRKDVGVGQLVDVKVLEKTKDGLQVAVLPHNIPAFLPTPHLSDHVANGPLVHRWLQAGDTLHRVLCLSQSERQVLLCRKPALVSSVEAGQDPKSFSEIQPGMLLVGFVKSIKDYGVFVQFPSGLSGLAPKAIMSDKFVTNPSDHFVEGQTVVAKVTNVDEEKQRMLLSLRLSDCRLGGPASGSLLLLSQCLEELQGVRSLMSSRDSVLVQALAEMTPGMVLNLVVQEVSEDGSVVFTGAPVRDLVLRASRYHRAGQEVESGQKKKAVILYVDMLGLEVHVSLRKELVNRKAWKLKKGSVHQATVQHLEESFAVASVGETGHLVAFSLASHLNDTFRFDSEKLQVGQSVCLVLKTAEPGVTGLLLAVEGPAARRVLRQPCKDSEMGDEGEGADPALAAGPRKKHGLAIGDVVTGTVKSVKPTHVVVTLEDGVMGCVHASHVLDEVPEGAAPTATLKVGKTVTARVIGGRDVKTFKFLPISHPRFIRTVPELSVRPSELEKDGHTVLNTYSASPVEKIQQYRAGQTVTCFLKKYNVVKKWLEVEIAPDIRGRIPLLLTSLSFKVLKHPDKKFQIGQALRATVVGPDSSKPFLCLSLIGPHKLKKGEVAMGRVVKVSPSEGLTVAFPFGRTGTVSVFHVSDSYSERPLQDFSPQKVVRCYVLSTANHVLTLSLRLSRTNPETKSKVEDPEINSILDIKEGQLLRGFVRSVEPSGVLLGLGPSVEGLARFSHVSQCSLPKKGLYSKYLPEGRLLTARVLRLDPSKNLVELSFLPGDTGKPDVMSVSPELLVQKQEEDVEVKERDRKGEKKRSPKRKEKKNQKGQEEGELPSKEQVRAKRPGKRERLGSEGAQESANKRRKKAGPPEEEDSGVEVYYREGAEEEAAEAEVLPTGTLTKPAEVPRLRLSSGFFWDVGLDTLTPALPPRGENSDSEEDEKPPHATQQKKSKKERELEKQKAEKELSRIEEALRDPGRQPESADDFDRLVLSSPSSSILWLQYMAFHLQATEIDKARAVAERALRTISFREEQEKLNVWVALLNLENMYGSPESLSKVFERAVQYNEPLKVFLHLADIYAKSEKFQEAGELYNRMLKRFRQEKSVWIKYGAFLLRRGQAGASHRVLQRALECLPAKEHMDVITKFAQLEFQLGDAERARAIFENMLSTYPKRTDIWSVYIDMTIKHGSQKEVRDIFERVIHLNLAPKKMKFFFKRYLDYEKQHGSEKDVRAVKAKALEYVEARSSVLED