Details from NCBI annotation

Gene Symbol Taf5
Gene Name TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa
Entrez Gene ID 101703818

Database interlinks

Part of NW_004624831.1 (Scaffold)

For more information consult the page for NW_004624831.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TAF5 ENSCPOG00000005294 (Guinea pig)

Gene Details

TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004762, Guinea pig)

Protein Percentage 92.94%
CDS Percentage 91.6%
Ka/Ks Ratio 0.20178 (Ka = 0.0469, Ks = 0.2325)

TAF5 ENSG00000148835 (Human)

Gene Details

TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa

External Links

Gene Match (Ensembl Protein ID: ENSP00000358854, Human)

Protein Percentage 94.84%
CDS Percentage 92.57%
Ka/Ks Ratio 0.11533 (Ka = 0.0269, Ks = 0.233)

Taf5 ENSMUSG00000025049 (Mouse)

Gene Details

TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000026027, Mouse)

Protein Percentage 94.84%
CDS Percentage 89.92%
Ka/Ks Ratio 0.06865 (Ka = 0.0262, Ks = 0.3816)

Taf5 ENSRNOG00000020274 (Rat)

Gene Details

TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor (Taf5), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000027482, Rat)

Protein Percentage 94.95%
CDS Percentage 90.19%
Ka/Ks Ratio 0.07181 (Ka = 0.0259, Ks = 0.3613)

Genome Location

Sequence Coding sequence

Length: 2385 bp    Location: 2609807..2625121   Strand: +
>XM_004866476.1
ATGGCGGCGCTGGCGGAGGAGCAGACGGAGGCGGCGGTCAAGCTGGAGCCCGAGGGACCGCCGACGCTGCTACCTCCGCAGGCAGGCGACGGCGCGGGCGAGGGCGGCGGCACCACCCCCAGCAACGGCCCCAGCGGCGGCGGCGGGAGCGTCGCGGCAGCGTCCTCGGCCGGCGGGGATGGCGGGACCCCCAAGCCTGCGGTGGCCATGCCCGCTGCTGCCCCGGCGCCTGCCGCCGCAGCCTCAGAGCCCGGCGCTCCCCACGACCGACAGACCCTCCTGGCAGTACTGCAGTTCCTACGGCAGAGCAATCTCCGCGAGGCCGAGGAGGCGCTGCGCCGCGAGGCCCGGCTGCTGGAGGAGGCGGCGGCGGGCTCCGGAGTCGCGGGAGAGCCGGACTGCGCCGAGGCGGCCAGCGCGCTGCTCAGCCGGGTCTCGGCCTCGGCCCCCGGCCCGGTGGTCCCGGACCCTCCCGGGACTGGCGCTCCGGGGTCCGCAGCCATCTCGGGCTCAGCCTCAGGGTCTTCGGGTCCGGGGAAAGTTGCAAGTGTAGCTGTGGAAGACCAGCCAGATGTCAGTGCTGTATTGTCTGCCTACAATCAACAAGGAGACCCTACCATGTATGAAGAGTACTATAGTGGACTGAAACACTTCATTGAATGTTCCTTGGACTGCCATCGAGCAGAACTATCCCAACTCTTTTATCCTCTGTTTGTACACATGTACTTGGAGCTAGTCTATAATCAACATGAGAATGAAGCAAAGTCGTTCTTTGAGAAGTTCCATGGAGATCAGGAATGTTATTACCAGGATGACCTACGAGTATTATCTAGTCTTACCAAAAAGGAACACATGAAAGGGAATGAAACCATGTTGGATTTTCGAACAAGTAAATTTGTTCTGCGTATTTCCCGTGACTCGTACCAACTCTTGAAGAGGCATCTTCAGGAGAAACAGAACAATCAGATATGGAACATAGTTCAGGAGCACCTCTACATTGACATCTTTGATGGGATGCCGCGTAGTAAGCAACAGATAGATGCGATGGTGGGAAGTTTGGCAGGAGAGGCTAAACGAGAGGCAAACAAATCAAAGGTATTTTTTGGTTTATTAAAAGAACCAGAAATCGAGGTGCCTTTGGATGATGAGGATGAAGAGGGAGAAAACGAAGAAGGAAAACCAAAAAAGAAGAAGCCTAAAAAAGATAATATTGGATCCAAAAGCAAAAAACAAGATCCCAATGCTCCACCTCAAAACAGAATCCCTCTTCCTGAGTTAAAAGATTCAGATAAGTTGGATAAGATAATGAATATGAAAGAAACCACCAAGCGAGTGCGTTTGGGGCCAGACTGCCTACCCTCCATTTGTTTCTATACATTCCTCAACGCTTACCAGGGCCTCACCGCAGTGGATGTCACTGATGATTCTAGTCTCATTGCCGGAGGTTTTGCAGATTCAACTGTGAGAGTCTGGTCTGTGACACCCAGAAAGCTTCGTAGCGTCAAACAGGCAGCAGATCTTAGCCTCATAGACAAAGAATCAGATGATGTCTTAGAAAGAATCATGGATGAGAAAACCGCAAGTGAGTTGAAGATTTTGTATGGTCACAGTGGGCCTGTCTATGGAGCCAGCTTCAGTCCCGATAGGAACTATCTACTTTCCTCTTCCGAGGATGGAACCATTAGATTATGGAGCCTTCAAACATTTACTTGCTTGGTGGGATATAAAGGACACAACTACCCGGTGTGGGATACACAGTTTTCTCCGTATGGATATTATTTTGTGTCAGGGGGCCATGACCGAGTAGCTCGGCTCTGGGCTACAGATCACTATCAGCCGTTAAGGATATTTGCTGGCCATCTTGCTGATGTGAATTGTACGAGGTTCCATCCAAACTCAAATTACGTTGCTACGGGATCTGCAGACAGAACCGTGCGGCTCTGGGATGTTCTGAATGGTAACTGTGTAAGGATCTTCACTGGACACAAGGGACCAATTCATTCCTTGACATTTTCTCCCAATGGGAGATTCCTGGCTACAGGAGCAACAGATGGCAGAGTGCTTCTTTGGGATATTGGACACGGTTTGATGGTTGGAGAATTAAAAGGCCACACTGACACAGTCTGTTCACTTAGGTTTAGTAGAGATGGTGAAATTTTGGCATCAGGGTCAATGGATAACACAGTCCGGTTATGGGATGCCATCAAAGCATTTGAAGATTTAGAGACTGATGACTTTACTACAGCCACTGGGCATATAAATTTACCTGAGAATTCACAGGAGTTGCTGTTGGGTACATATATGACCAAATCAACACCAGTTGTACACCTCCATTTTACTCGAAGAAACCTGGTTCTAGCTGCAGGAGCTTATAGTCCGCAATAA

Related Sequences

XP_004866533.1 Protein

Taf5 PREDICTED: transcription initiation factor TFIID subunit 5 [Heterocephalus glaber]

Length: 794 aa      View alignments
>XP_004866533.1
MAALAEEQTEAAVKLEPEGPPTLLPPQAGDGAGEGGGTTPSNGPSGGGGSVAAASSAGGDGGTPKPAVAMPAAAPAPAAAASEPGAPHDRQTLLAVLQFLRQSNLREAEEALRREARLLEEAAAGSGVAGEPDCAEAASALLSRVSASAPGPVVPDPPGTGAPGSAAISGSASGSSGPGKVASVAVEDQPDVSAVLSAYNQQGDPTMYEEYYSGLKHFIECSLDCHRAELSQLFYPLFVHMYLELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDFRTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLAGEAKREANKSKVFFGLLKEPEIEVPLDDEDEEGENEEGKPKKKKPKKDNIGSKSKKQDPNAPPQNRIPLPELKDSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDVTDDSSLIAGGFADSTVRVWSVTPRKLRSVKQAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAIKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKSTPVVHLHFTRRNLVLAAGAYSPQ