Details from NCBI annotation

Gene Symbol Tmem180
Gene Name transmembrane protein 180, transcript variant X7
Entrez Gene ID 101721591

Database interlinks

Part of NW_004624831.1 (Scaffold)

For more information consult the page for NW_004624831.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TMEM180 ENSCPOG00000011087 (Guinea pig)

Gene Details

transmembrane protein 180

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009968, Guinea pig)

Protein Percentage 90.5%
CDS Percentage 90.18%
Ka/Ks Ratio 0.13481 (Ka = 0.0493, Ks = 0.3655)

TMEM180 ENSG00000138111 (Human)

Gene Details

transmembrane protein 180

External Links

Gene Match (Ensembl Protein ID: ENSP00000238936, Human)

Protein Percentage 88.18%
CDS Percentage 87.98%
Ka/Ks Ratio 0.11061 (Ka = 0.0639, Ks = 0.5778)

Tmem180 ENSMUSG00000025227 (Mouse)

Gene Details

transmembrane protein 180

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000084189, Mouse)

Protein Percentage 86.82%
CDS Percentage 85.4%
Ka/Ks Ratio 0.09162 (Ka = 0.0738, Ks = 0.8052)

RGD1309313 ENSRNOG00000019674 (Rat)

Gene Details

similar to RIKEN cDNA 4930538D17 (RGD1309313), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000049314, Rat)

Protein Percentage 84.06%
CDS Percentage 83.44%
Ka/Ks Ratio 0.11341 (Ka = 0.093, Ks = 0.8201)

Genome Location

Sequence Coding sequence

Length: 1551 bp    Location: 1848308..1860381   Strand: +
>XM_004866443.1
ATGGGGCTGGGGTGGCCCCGGGCCCGGCTGTTGGGCCCACCCACGGCCATGGTCTATGGCTCCTTGGCCCTGTTCACCTCCATCCTGCACAATGTGTTCCTTCTCTACTACGTGGACACCTTTGTCTCAGTGTACAAGATCAACAAAACGGCCTTCTGGGTCGGGGAGACCGTGTTTCTCCTGTGGAACAGCCTCAACGACCCTCTCTTCGGCTGGCTCAGTGACCGCCAGTTCCTCAGCTCCCAGCCTCGGTCAGGCACTGGGCTCTCCTCGCGGGCTGTGGTGCTGAGCCGGGTGCAGGCCCTGGGCCGGCACGGGCCGCTGCTGGCACTGTCATTCCTGGCATTCTGGGTTCCCTGGGCCCCTGCTGGCCTGCAGTTCCTGCTGTGCCTGTGCCTCTACGATGGCTTCCTGACGCTCGTGGACCTGCACCATCACGCTCTGCTGGCCGACCTGGCCATCTCAGCCCACGACCGGACCCGCCTCAACTTCCACTGCTCCCTCTTCAGCGCGGCCGGCTCCCTCTCTGTCTTTGCCTCCTACGCCTTTTGGAACAAGGAGAATTTCTCTTCCTTCCGCACCTTCTGTGTGGCTCTGGCTGCTGGCTCTGCGCTGGGCTTCCTGGGGGCCACGCAACTGCTGCGGCAGTGGGTGGAGGTGGCCAGAAGGGACGCAGGGTGCTCAGCCCCAACTGGGGATGGCGGGGTGTGCAGAGAGGAGCTGCTGGCTGGCGCCGAGGAAGCTGGCAGCATCACCCTGGGCCAGTACCTCCGGCAGCTGGCACGTCACCAGAACTTCCTGTGGTTCGTGGGCATGGATCTGGTGCAGGTGTTTCACTGCCACTTCAACAGCAACTTCTTCCCCCTCTTCCTGGAGCACCTGCTGTCAGACCACATCCCCCTCTCCGCCGGCTCCTTCCTGTTGGGCATCTCCTACGTTGCTCCTCACCTCAACAACCTCTACTTTCTGCCCCTGTGCCGGCGCTGGGGCGTCTATGCTGTAGTGCGGGGGCTCCTCCTGCTCAAGCTGGGCCTTAGCCTGCTCATGCTGGTGGCTGGCCCGGACCGCTCAGGCCTACTCTGCTTCTTCATTGCCAGTAACCGTGTCTTCACCGAGGGCACCTGTAAGCTGCTGACGCTGGTGGTCACTGACCTGGTAGATGAGGACCTGGTGCTGAATCACCGCAAACAGGCAGCCTCGGCGCTCCTCTTTGGCATGGTTGCCCTGGTGACCAAACCAGGCCAGACCTTCGCCCCACTGCTGGGCACCTGGCTTCTCTGCTTCTACACAGGTCATGACCTCTTCCAGCAGCCCCTGGGGACCCCCGTGGGCAGTGCCAAGCCCTGGCCAGAGCCGCCAGCTCCAGCCCCGGCGAGGGCCCCACTCCGCCAGGGCTGCTTCTACCTGCTGGTGCTGGTGCCCATCACCTGCGCACTGCTGCAGCTCCTCACCTGGTCCCGGTTCACGCTGCATGGGCAGCACCTGCGCATGGTCAAGGCCCAGCGCCAGAGCCTGGCACAGGTCCAGACTCTGGACGTTAAGACAGTGTGA

Related Sequences

XP_004866500.1 Protein

Tmem180 PREDICTED: transmembrane protein 180 isoform X7 [Heterocephalus glaber]

Length: 516 aa      View alignments
>XP_004866500.1
MGLGWPRARLLGPPTAMVYGSLALFTSILHNVFLLYYVDTFVSVYKINKTAFWVGETVFLLWNSLNDPLFGWLSDRQFLSSQPRSGTGLSSRAVVLSRVQALGRHGPLLALSFLAFWVPWAPAGLQFLLCLCLYDGFLTLVDLHHHALLADLAISAHDRTRLNFHCSLFSAAGSLSVFASYAFWNKENFSSFRTFCVALAAGSALGFLGATQLLRQWVEVARRDAGCSAPTGDGGVCREELLAGAEEAGSITLGQYLRQLARHQNFLWFVGMDLVQVFHCHFNSNFFPLFLEHLLSDHIPLSAGSFLLGISYVAPHLNNLYFLPLCRRWGVYAVVRGLLLLKLGLSLLMLVAGPDRSGLLCFFIASNRVFTEGTCKLLTLVVTDLVDEDLVLNHRKQAASALLFGMVALVTKPGQTFAPLLGTWLLCFYTGHDLFQQPLGTPVGSAKPWPEPPAPAPARAPLRQGCFYLLVLVPITCALLQLLTWSRFTLHGQHLRMVKAQRQSLAQVQTLDVKTV