Details from NCBI annotation

Gene Symbol Nolc1
Gene Name nucleolar and coiled-body phosphoprotein 1, transcript variant X5
Entrez Gene ID 101709252

Database interlinks

Part of NW_004624831.1 (Scaffold)

For more information consult the page for NW_004624831.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

NOLC1 ENSCPOG00000004504 (Guinea pig)

Gene Details

nucleolar and coiled-body phosphoprotein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004064, Guinea pig)

Protein Percentage 74.29%
CDS Percentage 80.85%
Ka/Ks Ratio 0.54244 (Ka = 0.1927, Ks = 0.3552)

NOLC1 ENSG00000166197 (Human)

Gene Details

nucleolar and coiled-body phosphoprotein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000474710, Human)

Protein Percentage 80.35%
CDS Percentage 82.87%
Ka/Ks Ratio 0.2462 (Ka = 0.1236, Ks = 0.5022)

Nolc1 ENSMUSG00000015176 (Mouse)

Gene Details

nucleolar and coiled-body phosphoprotein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000128331, Mouse)

Protein Percentage 71.89%
CDS Percentage 76.18%
Ka/Ks Ratio 0.26569 (Ka = 0.2026, Ks = 0.7624)

Nolc1 ENSRNOG00000018704 (Rat)

Gene Details

nucleolar and coiled-body phosphoprotein 1 (Nolc1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000025788, Rat)

Protein Percentage 73.98%
CDS Percentage 76.75%
Ka/Ks Ratio 0.21913 (Ka = 0.1802, Ks = 0.8225)

Genome Location

Sequence Coding sequence

Length: 2100 bp    Location: 1613333..1619414   Strand: +
>XM_004866396.1
ATGGCGGACGCTGGCTTGCGCCGCGTGGTTCCCAGCGACTTGTACCCCCTCGTGCTCGGCTTTCTGCGCGATAACCAACTCTCGGATGTGGCCAATAAGTTCGCCAAGGCGACGGGCGCTACGCGACAGGATGCCAACGCCTCCTCCCTCCTGGACATCTATAGCTTCTGGCTCAAGTCCACCAAAGCCCCCAAGCGGAAGTTACAGGCAAATGGACCGGTGACTAAGAAGGCTAAGAAGAGCAGCTCATCCAGTGACAGCAGTGAGGACAGCAGTGAGGAGGAAGAAGAGGCGCGAGGACCTCCAGCTAAGAAGTCTGCTCTATCTGTACCTGCTGAGCGGGCCAGTCCACCTCAGCATCCTGGAAAGACTGTGGCCAAAACTTCGGAGAGCAGCAGCAGTGAAGAATCCAGTGATGATGAGGAAGAGGACAAAAAGAAAAACATTGTTCAGAAGGGAGTCAAACTCCAACCCAAGGCAGCTAGAGCTCCTCCTAAGAAGACCAAGAAGTCCGAGTCTGAGTCTGAGTCTGACTCAAGTTCAGAGGATGAGGCACCAAAGAACCACAAGCCAAAGACAACACCCGTGGCCACAAAAGCTCAGGCGAAAGCTCGGGCCAAACCAGCTCAAACATCACCTAAGGTGGCCAATGGCAAAGCCGCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTAGCAGCAGTAGCAGTGAAGATTCCGAGGAGGAGATGGCAGCAGCTGTCCCCAAGAAGACTACACCTAAAAAGCAGGCTGTGGCCAAGGCCTCTGTAAAAGCAGCTGTCATTTCAGCTCAGAAGAGTTCTAGTAGTGAAGAGTCCTCCAGTGAGGAGGAGGGGCGGAAAAAGCCCGTGAAGAAAAAATCAGGTCCCTACAGTTCTGTGCCCCCACCAAAGAAGCCTCTGGGAGCCCAATCTTCTAAGAAAGCTGTGGAGAAGAAACATCCCAAGGAAAGCAGTGAAGACAGCAGCGATGAGTCTGATTCCAGCTCTGAGGAAGAGAAGAAACCCCCAGCTAAAGCAGCCATCTCCAAAGCAGCCGCCAAACCAGTTCCAGCAAAGAAGGCAGAGGAGAGCACTTCAGACAGTTCAGACTCTGACAGCTCCGAGGATGAAGCTCCAACCAAGCCAGCCAGTAGTGCTAAGAAGTCCTTAAGTCAGCCAGCCACCACTCCTAAGCAAGCTGCAGCCAAGCCTGCAGCCGCCAATCCCAGGGAGCTTGCAGGCAGTGGACAGAAGCCTCTGAGCAGGAAGGCTGATAGTAGCTCGAGTGAGGAAGAGAGCAGTTCCAGTGCAGAGGAGGAGACACAGAAGACCACGGCCACCCTGAAGCCTAAGGTGACCGCCAAAGCCACACTGTCTCTGCCTGCCAGACAGGCTGCACAGGGCAGCAGCTCCGACTCCGACAGCTCCAGCAGTGAAGAGGAGGCAGAGAAGATATCCAAGTCCCCAGTGAAAAAGAAGCCTGCAAAGGTGGCCGGAGGGGCAGCCTGCTCAAAGGCAGCCTCTACCAAGAAAGCCAAGGCTGAGAGCAGCAGCAGTTCTTCCTCGGATGATTCCAGTGAGGAAGAGGAGAGACCCAAGGGCAAGCCCACTCCACGGTCCCAAGCTCCCAAGGCCAATGGCACCTCAGCACTGACTGCTCAGAATGGGAAGGCTGGCGGGGACAGCAAGGAGGAGGGAGCGGCAGGGAACAAAAAGGCAGCAGTGGCCTCCACCAAACCAGGTTCTGGAAAGAAGCGGAAGCAGAATGAGGCAGTCAAAGAGGCAGAGACTCCTCAAATCAAGAAGATGAAGCTGCAGACTCCCAACACATTTCCAAAAAGGAAGAAAGGAGAAAAAAGAGCATCTTCCCCATTTCGGAGGGTCAGGGAGGAGGAAATTGAGGTGGATTCCCGAGTGGCAGACAACTCCTTCGATGCCAAGAAAGGTGCAGCCGGAGACTGGGGGGAACGGGCCAATCAGGTTCTGAAGTTCACCAAAGGCAAGTCCTTCAGGCACGAGAAAACCAAGAAGAAGCGAGGCAGCTACCGAGGAGGCTCCATTTCTGTCCAGGTCAATTCCATCAAGTTTGACAGCGAGTGA

Related Sequences

XP_004866453.1 Protein

Nolc1 PREDICTED: nucleolar and coiled-body phosphoprotein 1 isoform X5 [Heterocephalus glaber]

Length: 699 aa      View alignments
>XP_004866453.1
MADAGLRRVVPSDLYPLVLGFLRDNQLSDVANKFAKATGATRQDANASSLLDIYSFWLKSTKAPKRKLQANGPVTKKAKKSSSSSDSSEDSSEEEEEARGPPAKKSALSVPAERASPPQHPGKTVAKTSESSSSEESSDDEEEDKKKNIVQKGVKLQPKAARAPPKKTKKSESESESDSSSEDEAPKNHKPKTTPVATKAQAKARAKPAQTSPKVANGKAASSSSSSSSSSSSSSSEDSEEEMAAAVPKKTTPKKQAVAKASVKAAVISAQKSSSSEESSSEEEGRKKPVKKKSGPYSSVPPPKKPLGAQSSKKAVEKKHPKESSEDSSDESDSSSEEEKKPPAKAAISKAAAKPVPAKKAEESTSDSSDSDSSEDEAPTKPASSAKKSLSQPATTPKQAAAKPAAANPRELAGSGQKPLSRKADSSSSEEESSSSAEEETQKTTATLKPKVTAKATLSLPARQAAQGSSSDSDSSSSEEEAEKISKSPVKKKPAKVAGGAACSKAASTKKAKAESSSSSSSDDSSEEEERPKGKPTPRSQAPKANGTSALTAQNGKAGGDSKEEGAAGNKKAAVASTKPGSGKKRKQNEAVKEAETPQIKKMKLQTPNTFPKRKKGEKRASSPFRRVREEEIEVDSRVADNSFDAKKGAAGDWGERANQVLKFTKGKSFRHEKTKKKRGSYRGGSISVQVNSIKFDSE