Sequence details NCBI ID: XM_004866344.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Lbx1
Gene Name ladybird homeobox 1
Entrez Gene ID 101726006

Database interlinks

Part of NW_004624831.1 (Scaffold)

For more information consult the page for NW_004624831.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LBX1 ENSCPOG00000025830 (Guinea pig)

Gene Details

ladybird homeobox 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000015669, Guinea pig)

Protein Percentage 89.76%
CDS Percentage 88.58%
Ka/Ks Ratio 0.13066 (Ka = 0.0665, Ks = 0.5091)

LBX1 ENSG00000138136 (Human)

Gene Details

ladybird homeobox 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000359212, Human)

Protein Percentage 96.43%
CDS Percentage 93.81%
Ka/Ks Ratio 0.03039 (Ka = 0.0142, Ks = 0.4686)

Lbx1 ENSMUSG00000025216 (Mouse)

Gene Details

ladybird homeobox homolog 1 (Drosophila)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000096997, Mouse)

Protein Percentage 97.5%
CDS Percentage 93.57%
Ka/Ks Ratio 0.02069 (Ka = 0.0101, Ks = 0.4896)

Lbx1 ENSRNOG00000025520 (Rat)

Gene Details

ladybird homeobox 1 (Lbx1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000021747, Rat)

Protein Percentage 97.5%
CDS Percentage 93.57%
Ka/Ks Ratio 0.02026 (Ka = 0.0101, Ks = 0.4992)

Genome Location

Sequence Coding sequence

Length: 843 bp    Location: 780365..778866   Strand: -
Raw sequence   
>XM_004866344.1
ATGACTTCCAAGGAGGACAGCAAGGTGGCGCCGGGGGAGGAGCGGCGGCGCAGCCCCCTGGACCACCTGCCGCCGCCCGCCAACTCCAACAAGCCGCTGACGCCGTTCAGCATCGAGGACATCCTCAACAAGCCGTCCGTGCGGAGAAGTTACTCGCTGTGCGGGGCGGCGCACCTGCTGGCGGCCGCGGACAAGCACGCGCCGGGCGGCTTGCCCCTGGCGGGCCGCGCGCTGCTCTCGCAGACCTCGCCGCTGTGCGCGCTGGAGGAGCTCGCCAGCAAGACCTTTAAGGGGCTGGAGGTCAGCGTCCTGCAGGCGGCCGAAGGCCGAGATGGGATGACCATCTTTGGGCAGCGGCAGACCCCCAAGAAGCGGCGAAAGTCGCGCACGGCCTTCACTAACCACCAGATCTACGAGCTGGAAAAGCGATTCCTGTACCAGAAGTACCTGTCCCCGGCAGACCGCGACCAAATCGCGCAGCAGCTGGGCCTCACCAACGCCCAGGTCATCACCTGGTTCCAGAACCGGCGTGCCAAGCTCAAGCGGGACCTGGAGGAGATGAAGGCCGACGTGGAGTCCGCCAAGAAACTGGGTCCCAGCGGGCAGATGGACATCGTTGCGCTGGCCGAACTCGAGCAGAACTCGGAGGCCGCAGGCGGCGGCAGCGGCTGCGGCAGGGCCAAGTCGAGGCCGGGCTCCCCGGCGCTCCCCCCAGGCGCCCCGCAGGGCCCGGGCGCCGGACCCTTGCAGCTCTCGCCGGCCTCTCCGCTCACGGACCAGCGGACCAGCAGCCAGGACTGCTCAGAGGACGAGGAAGACGAAGAGATCGACGTGGACGACTGA

Related Sequences

XP_004866401.1 Protein

Lbx1 PREDICTED: transcription factor LBX1 [Heterocephalus glaber]

Length: 280 aa      View alignments
>XP_004866401.1
MTSKEDSKVAPGEERRRSPLDHLPPPANSNKPLTPFSIEDILNKPSVRRSYSLCGAAHLLAAADKHAPGGLPLAGRALLSQTSPLCALEELASKTFKGLEVSVLQAAEGRDGMTIFGQRQTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRDLEEMKADVESAKKLGPSGQMDIVALAELEQNSEAAGGGSGCGRAKSRPGSPALPPGAPQGPGAGPLQLSPASPLTDQRTSSQDCSEDEEDEEIDVDD