Details from NCBI annotation

Gene Symbol Pdzd7
Gene Name PDZ domain containing 7, transcript variant X6
Entrez Gene ID 101720971

Database interlinks

Part of NW_004624831.1 (Scaffold)

For more information consult the page for NW_004624831.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PDZD7 ENSCPOG00000000952 (Guinea pig)

Gene Details

PDZ domain containing 7

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000856, Guinea pig)

Protein Percentage 83.73%
CDS Percentage 86.27%
Ka/Ks Ratio 0.10787 (Ka = 0.0771, Ks = 0.7147)

PDZD7 ENSG00000186862 (Human)

Gene Details

PDZ domain containing 7

External Links

Gene Match (Ensembl Protein ID: ENSP00000359234, Human)

Protein Percentage 85.27%
CDS Percentage 85.59%
Ka/Ks Ratio 0.09214 (Ka = 0.0736, Ks = 0.7986)

Pdzd7 ENSMUSG00000074818 (Mouse)

Gene Details

PDZ domain containing 7

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000119002, Mouse)

Protein Percentage 84.47%
CDS Percentage 82.74%
Ka/Ks Ratio 0.08995 (Ka = 0.0855, Ks = 0.9503)

Pdzd7 ENSRNOG00000032946 (Rat)

Gene Details

PDZ domain containing 7 (Pdzd7), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000045330, Rat)

Protein Percentage 84.62%
CDS Percentage 83.19%
Ka/Ks Ratio 0.10205 (Ka = 0.0856, Ks = 0.8393)

Genome Location

Sequence Coding sequence

Length: 2721 bp    Location: 624091..610482   Strand: -
>XM_004866330.1
ATGGCGCGCGGTTTCGCAGCGGCCTCCGACTCACTGGGCCTAGGAGAACTCAGCTCCAGCTCTCCGAGCTCCCTGTCCTCCCGGGGCCACCTGGGCAGCGACTCGGGCTCCACCGCAACGCGATACCTGCTGAGAAAGCAGCAGCGGCTGCTGAATGGGCCCTCCCGCGGAATCCGAGCCTCCTCACCCATGGGCCGAGTGATCCTCATCAACTCCCCCATCGAAGCCAACAGCGACGAAAGTGACATCATCCACGCAGTCCGCGTGGAGAAGAGCACAGCAGGAAGACTGGGGTTCAGCGTGCGGGGCGGCTCCGAGCACGGTCTGGGCATCTTCGTCAGCAAGGTGGAGGGCGGGAGCAGCGCCGGTGAGTGGGCCTGCGCCCTGGGTGAATGCGGGCGGAGCCCTGTGAGGGGGAGCTCAGCGCCGACTCACCCCGCAGAGCGGGCCGGCCTGCGTGTGGGGGACAAGATCTCAGAGGTGAACGGGCTGAGCCTGGAGAGCACCACGATGGCCAGCGCCGTGAAAGCGCTGACCCGCAGCAGCCGCCTGCGCATGACCGTGCGGCGCATGGGCCGAGTACCGGGCATCAAATCCTCCAAGGAGAAGACCACCTGGGTGGACGTGGTGAACCAGCGGCTGGTGGTGGAGAGGTGTGGCTCGTCGCCGGCTGACAGAGGCTCGGGGGACGCTGTGCGGCGCATAGTGCACCTGTACACGACCTCCGACGACCTCTGCCTGGGCTTCAACATCCGTGGGGGCAAAGAGTTCGGCCTGGGCATCTATGTGTCCAGAGTGGACCCCGGCGGGCTGGCTGAGGAGAACGGCATCAAGGTGGGGGACCAGGTCCTGGCGGCCAACGGTGTCAGATTCGACGACATCAGCCACAGCCAGGCTGTGGAGGTGCTGAAGGGCCAGACACACACCATGCTGACTGTCAAGGAGACCGGCCGATACCCTGCCTACAAGGAGATGGTCTCTGAATACTGTTGGCTGGACCGATGTAAGTGGCTCAGGTACCCAAGGATGGAGGGAAGGGGGTCTCGGAGAAAGAAAAGGGCGTGGCCCAGGACCCTCTCAGGACCCTCACCCCCAGGAACTGCTGCGGGTCCCTCTGAGGACTTGCACGCTCGCTCCCAGCTCCCCTGGGCTGGATGGACGCCCTGGGACTCGAGAAGCCCCTTGGCAGCACCCCCCAGGTCCGCAGGACTAGTGGCTCCGACCGAACCGCGGCCTGGTGGTCCTTCCTCCTCCACCCGTGTCCCCTGTGGCCCGCAAGTCTCCCGGCCCTGGAGTAGACCAGCCAGAGGCCTGAGGGGCCTCGCTCTCCCTGCAGTGAGCGATGGCGCGGGCGCGCCGCAGCAGCTGTGCCCCGCCTCCGCCTCCGAGAGCAGCTCCAGCGTCTCCTCCTACGCCTCCAGCACCCCCTACAGCTGGGGCTCCCTGCCCTCCGACCGCGCGGACACTTGCCTGGGGCCGGCGGAGCTGGGGGACCAGGCGCCAGGCTGGGGCAGGGCGGACACTGCCATGCAGACGGAGCCCGACGTGGGGGGCCGCATGGAGACCTGGTGCAGCGTGCGGCCCACGGTCATCCTCAAGGACACCGCCATCCGCTCCGACGGCCCCCCACCCTCCCGGTGCCTTGACTCTGCCCTCCCCGAGTCCCCCAAGACTGCGCTGCTGCTGGCCCTCGGCCGGCCCAGGCCCCCTATCACGCGCTCCCGGAGCCAGCTGACCCTGTGGGAGGAGAAGAAGCAGCAGAAGGAGAAGTCGGGGTCCCCTGGGGAGAAGGGGGCCCTGCAGCGCTCCAAGACGCTGATGAACCTCTTTTTCAAGGGAGGGCGGCAGGGGCGGCTTGCAGGGGATGGGCTCAGAGAGGCCTGGACGCTGGACTGCAGGAGCCCAGCCAAAGCCCGGCCTTGCCTGGACCTGGAGAAAGCTTCGGACTCGAGCTGTCTAAAGGCCTGCACAGCACCCCACACGTGTCCCTCTGCATCTGTCGCTCCCTCTTTTCCATGGGTTGGCTCCGCTCTCGTCATGGAGATCTTCTCACTCCCTCCACTCGCTCTGAGTGAAGTGTCTGGCCGGCAAGACTTTGCAGCCCGGCAGGCCCAGGCCCCTTCCAGGCAGGCTTGCCACCCTGTCCAGGCCCCAGCCCTCCGCTTCCGGGCTGGGGCCCAGATTCTGCAGCTGGACCTCCTCTCCTCACCAGGGAGCACAGGGCCTGTGCAGAAGTTTGTTCCCCGGAGGCTGAGAGGCGACTGGGAGAGGGGCCGAGCCCTGCTGTTGGCCAGGTCTGGGAGCCCAGCCAGCCAGCTGCCCAGTACAGATGAGCGGGTGCAGGCCTGGGACAGCCGACGGCCCCTCATTCAGGACCTGGCCCGCCGGCTGCTGACCGAGGACGAGGTGCTGGCGGTCACTCGCCACTGCTCCAGGTACGTGCACGAGGGTGGGGTGGAGGACCTGGTGCGGCCCCTGCTGGCCATTCTGGACAGGCCCGAGAAGCTGCTGCTGCTGAGGGACATCAGGAGTGTGGTGGTCCCCACGGACCTGGGTCGCTTCGAGAGCATGGTGACGCCTGCAGAACTGGAGGCCTTTGAAGCCCTGAAGAGCAGGGCAGTGTGGCCTCCCACTCTGAGACCAGCCCAGCAGGACACACCACCCAAACGCCATCTCGTCACCCCTGTGCCTGCCGCGGAGGCTTCTACCTGCTGCCTGTGA

Related Sequences

XP_004866387.1 Protein

Pdzd7 PREDICTED: PDZ domain-containing protein 7 isoform X6 [Heterocephalus glaber]

Length: 906 aa      View alignments
>XP_004866387.1
MARGFAAASDSLGLGELSSSSPSSLSSRGHLGSDSGSTATRYLLRKQQRLLNGPSRGIRASSPMGRVILINSPIEANSDESDIIHAVRVEKSTAGRLGFSVRGGSEHGLGIFVSKVEGGSSAGEWACALGECGRSPVRGSSAPTHPAERAGLRVGDKISEVNGLSLESTTMASAVKALTRSSRLRMTVRRMGRVPGIKSSKEKTTWVDVVNQRLVVERCGSSPADRGSGDAVRRIVHLYTTSDDLCLGFNIRGGKEFGLGIYVSRVDPGGLAEENGIKVGDQVLAANGVRFDDISHSQAVEVLKGQTHTMLTVKETGRYPAYKEMVSEYCWLDRCKWLRYPRMEGRGSRRKKRAWPRTLSGPSPPGTAAGPSEDLHARSQLPWAGWTPWDSRSPLAAPPRSAGLVAPTEPRPGGPSSSTRVPCGPQVSRPWSRPARGLRGLALPAVSDGAGAPQQLCPASASESSSSVSSYASSTPYSWGSLPSDRADTCLGPAELGDQAPGWGRADTAMQTEPDVGGRMETWCSVRPTVILKDTAIRSDGPPPSRCLDSALPESPKTALLLALGRPRPPITRSRSQLTLWEEKKQQKEKSGSPGEKGALQRSKTLMNLFFKGGRQGRLAGDGLREAWTLDCRSPAKARPCLDLEKASDSSCLKACTAPHTCPSASVAPSFPWVGSALVMEIFSLPPLALSEVSGRQDFAARQAQAPSRQACHPVQAPALRFRAGAQILQLDLLSSPGSTGPVQKFVPRRLRGDWERGRALLLARSGSPASQLPSTDERVQAWDSRRPLIQDLARRLLTEDEVLAVTRHCSRYVHEGGVEDLVRPLLAILDRPEKLLLLRDIRSVVVPTDLGRFESMVTPAELEAFEALKSRAVWPPTLRPAQQDTPPKRHLVTPVPAAEASTCCL