Details from NCBI annotation

Gene Symbol Ccdc109b
Gene Name coiled-coil domain containing 109B
Entrez Gene ID 101706115

Database interlinks

Part of NW_004624830.1 (Scaffold)

For more information consult the page for NW_004624830.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CCDC109B ENSG00000005059 (Human)

Gene Details

coiled-coil domain containing 109B

External Links

Gene Match (Ensembl Protein ID: ENSP00000378145, Human)

Protein Percentage 70.54%
CDS Percentage 76.09%
Ka/Ks Ratio 0.28391 (Ka = 0.197, Ks = 0.6938)

Ccdc109b ENSMUSG00000027994 (Mouse)

Gene Details

coiled-coil domain containing 109B

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000029624, Mouse)

Protein Percentage 63.66%
CDS Percentage 70.93%
Ka/Ks Ratio 0.24492 (Ka = 0.2489, Ks = 1.0161)

Ccdc109b ENSRNOG00000009433 (Rat)

Gene Details

Protein Ccdc109b

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000012586, Rat)

Protein Percentage 66.45%
CDS Percentage 73.9%
Ka/Ks Ratio 0.23463 (Ka = 0.2126, Ks = 0.9061)

Genome Location

Sequence Coding sequence

Length: 1641 bp    Location: 263273..188053   Strand: -
>XM_004866293.1
ATGTGTTTCCATCAGGGTCGGGGCCTGAAGGGGTACTTCCAAGGGCGCATCCGCGGCGAGGCCGAGCAGGACTGTGCAGCCCCAGAGGAGGGGAGAGGAGAGGAGAAGGGGAGGGGAGGGCCCCCGCTCTTCCCCGGGAGGCTTCACCACTTGGCGCGCGTGGGCCAACTTCGCTCCCAACCCGAGACTCCGGCGCGGTCGGCAGCAGGGAGGCCGGTGGGGCCTGCGCTGCCGTGGGCGCGGGCGCTGGGTGCGAGTCCGCCCAGCCTTGGGCGCCGCTTCCCTGAAGCCGAAATTACCTGCGTGACCGAGCGGGCTTCCTCCCGCCTCGCGCTGTTTCCAGAAACAGCGGCTCCCGTTGCTGGGAAAACCAAGTTGCCGTCCTGCGGCTCCTCCAACTCAAACCCGCCTCGATCGAGCAGCCGGCCCGGCTTCGGGAGCGGTTTCCCGGGAGCAGGGCCGGGCACCGCACACCTGCGGCCGCGGAGGGGCCCAGGCGACCCCGCGGTCTCGACCTTCCCTCCCGCCCGGGCGCGGGCCCCACCCGCGGATGCAGCGGGCGGGACCGAGCGGCGAGGGCGCGGCCTGGCGCCGGCGCTGGGGTGTTGGGAGGACACGCCCCGGTCCCGCCTGCTCCTCGGCCGCGCTCCGCGGCAGGACCAGGCCGGGATGCTGGCGCGCGGGCCGCTGCGGCTGCCCCCGAGCCCCGGAGCCCGGGCGGGCGCACAGATTTTGCATGTGAAACTGTGTGGAAATCCAAAATACCCCCAGTCACACCTCTCCAGCGCTGTGGTGGCCCCTGATGAAGTAACAGTGAATTATCGACATGGCCTTCCCTTGATAACACTCACTTTGCCATCCAGAAAAGAGCGCTGTCGATTCGTAGTCAAACCAATGTTGTCAACAGTTGGCTCCTTCCTTCAGGACCTCCACCACGAAGACAAAGGTGTCAGAGCCGCAGCCATCTTCACAGCAGACGGCAGTGAGATTCCAGCTTCGACCTTGATGGATGTTTTGCTGATGAAAAACTTTAAACTTGTCGTTAATGAAAGAGCCTATGTCGTACAGAGTCCCGAGGGAGAGAAACCAAGTAGGGAGCCCTTGAGGGAGATGGAAAACGCGTACTCCTTGGTGCACAGGCTGTTTTCGGTCCTGCACCCAGAGGAGTCCCAGAAGGAGACGGAGCACCGCTTGCTGGTGAGGATTGACCACCTGCAGGCACAGCTGCAGCCACTGGAGCAGGTGAAGGCTAGAATTGAGGCTCGAGCGGAAGCCAACACCAGCAGGCTGCTGTGGGCCGGCCTGGCACTGCTGTCTGCCCAGGGGGGCGCACTGGCCTGGCTCACCTGGTGGGTGTACTCCTGGGACCTCATGGAGCCTGTCACCTGCTTCCTCACCTTCGCAAACTCCATGGCCTTCTTTGCCTACTTCATAGTCACGCGGCAGAACTGTACTTATCCCACCGCTAGGAGGAGGCAGCTTCTTCACATCTTCCACAAGTGGTCAAGGCACCAGCGCTTCGATGTGCAGCAGTACAGCGAGTTGAAGGACGAGCTGGCCAAGGCTAAAGAGTCCCTGAAACGTGTCCGCTGCTCAGTCTACCTGGGGCTGCAGGTAGAGGAACTCAAGGAGAAGAATTAG

Related Sequences

XP_004866350.1 Protein

Ccdc109b PREDICTED: coiled-coil domain-containing protein 109B [Heterocephalus glaber]

Length: 546 aa     
>XP_004866350.1
MCFHQGRGLKGYFQGRIRGEAEQDCAAPEEGRGEEKGRGGPPLFPGRLHHLARVGQLRSQPETPARSAAGRPVGPALPWARALGASPPSLGRRFPEAEITCVTERASSRLALFPETAAPVAGKTKLPSCGSSNSNPPRSSSRPGFGSGFPGAGPGTAHLRPRRGPGDPAVSTFPPARARAPPADAAGGTERRGRGLAPALGCWEDTPRSRLLLGRAPRQDQAGMLARGPLRLPPSPGARAGAQILHVKLCGNPKYPQSHLSSAVVAPDEVTVNYRHGLPLITLTLPSRKERCRFVVKPMLSTVGSFLQDLHHEDKGVRAAAIFTADGSEIPASTLMDVLLMKNFKLVVNERAYVVQSPEGEKPSREPLREMENAYSLVHRLFSVLHPEESQKETEHRLLVRIDHLQAQLQPLEQVKARIEARAEANTSRLLWAGLALLSAQGGALAWLTWWVYSWDLMEPVTCFLTFANSMAFFAYFIVTRQNCTYPTARRRQLLHIFHKWSRHQRFDVQQYSELKDELAKAKESLKRVRCSVYLGLQVEELKEKN