Details from NCBI annotation

Gene Symbol Nfkb1
Gene Name nuclear factor of kappa light polypeptide gene enhancer in B-cells 1, transcript variant X4
Entrez Gene ID 101696485

This gene is present in the GenAge database and has been identified as potentially important to ageing in humans.

Database interlinks

Part of NW_004624830.1 (Scaffold)

For more information consult the page for NW_004624830.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

NFKB1 ENSCPOG00000007789 (Guinea pig)

Gene Details

nuclear factor of kappa light polypeptide gene enhancer in B-cells 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007014, Guinea pig)

Protein Percentage 88.43%
CDS Percentage 86.98%
Ka/Ks Ratio 0.12529 (Ka = 0.0673, Ks = 0.5376)

NFKB1 ENSG00000109320 (Human)

Gene Details

nuclear factor of kappa light polypeptide gene enhancer in B-cells 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000226574, Human)

Protein Percentage 84.5%
CDS Percentage 78.29%
Ka/Ks Ratio 0.07019 (Ka = 0.0923, Ks = 1.3149)

Nfkb1 ENSMUSG00000028163 (Mouse)

Gene Details

nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000029812, Mouse)

Protein Percentage 83.66%
CDS Percentage 79.05%
Ka/Ks Ratio 0.07497 (Ka = 0.0961, Ks = 1.2817)

Nfkb1 ENSRNOG00000023258 (Rat)

Gene Details

nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 (Nfkb1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000028944, Rat)

Protein Percentage 82.74%
CDS Percentage 78.45%
Ka/Ks Ratio 0.07041 (Ka = 0.1, Ks = 1.4209)

Genome Location

Sequence Coding sequence

Length: 2916 bp    Location: 5431244..5334353   Strand: -
>XM_004866271.1
ATGACGGAAGATGATTCGTACCTGGGAGGGCACGAACAAATGTTTCATTTGAATCCTCTGACTCATGCAATATTTAACCCAGAATTATTTCCACCAGAGATGCCCCTGCAGACAGCAGATGGTCCATTCCTTCAAATATTAGAGCAACCTAAACAGAGAGGATTCCGTTTCCGTTATGTGTGCGAAGGCCCCTCACACGGAGGGCTCCCAGGGGCATCCAGCGAGAAGAACAAGAAGTCCTACCCTCAGGTCAAAATCTGCAACTATGTGGGCCCTGCCAAAGTCATTGTTCAGCTGGTCACAAACGGGAAGAACGTCCGCCTGCACGCCCACAGCCTGGTGGGCAAGCACTGCGAGGACGGCGTCTGCACTGTCACTGCGGGTCCCAAGGACATGGTGACCAGCTTCGCCAACCTGGGCATCCTCCATGTGACAAAGAAGAAGGTGTTCGAGACCCTGGAGACGCGGATGACGGACGCGTGCATCAGGGGCTACAACCCCGGGCTCCTGGTGCACCCCGACCTCGCCTACCTGCAAGCCGAGGGGGGCGGAGGTGACCGGCAGCTCACGGACCGGGAGAAGGAGCTGATCCGCCAGGCGGCCCTGCAGCAGACCAAGGAGATGGACCTGAGCGTGGTGCGGCTCATGTTCACCGCCTTCCTGCCCGACAGCACCGGCAGCTTCACACGCCGCCTGGAGCCCGTGGTGTCCGACGCCATCTACGACAGCAAGGCCCCCAATGCATCCAACTTGAAAATCGTGAGGATGGACCGGACTGCCGGCTGCGTGACTGGTGGGGAGGAGATTTACCTCCTGTGTGACAAGGTGCAGAAAGATGACATCCAGATTCGGTTCTATGAAGAGGAGGAAAACGGAGGCATTTGGGAAGGATTTGGAGACTTTTCCCCCACAGATGTTCACAGACAATTTGCCATCGTCTTCAAAACCCCGAAGTATAAAGACATCAACATCACCAAGCCGGCTTCTGTGTTTGTCCAGCTTCGGAGGAAGTCGGATTTGGAAACCAGCGAGCCTAAGCCTTTCCTCTACTACCCCGAAATCAAAGACAAAGAGGAAGTGCAGAGGAAGCGGCAGAAGCTGATGCCCAACTTCTCGGACAGCTTCGGCGGCGGTGGCGGCGCAGGCGCAGGAGGCGGGGGCATGTTCGGCGGCGGTGGCGGCGGTGGCGGCGGTGGCGGAGCAGGGGCCCCTGGCAATGCCGGACCAGGGTACGGCTTCCCACACTATGGATTCCCCACGTACGGCGGGGTCGCCTTCCACCCCGGGACCACGAAGTCCACCACCGGCATGAAGCATGAAACCGTAAACACTGAATGTGACCATGACCCTGCAGGCTGTGAGGCCTGCGAAGATGGGGAGGTGATTATAGCCCCAGAGCTCGAGGAGGAGGCAGGTGCACCCAGCCCCGGGACCCACAGGGCACCGCTGACCGGAGCCGTGCGCAGAGAGGACGAGGGGACGAGGTTTCCGGACAACCTCTTCCTGGAGAAGGCCCTGCAGCTCGCCAAGCGCCACGCCAATGCCCTCTTTGACTACGCGGTCACGGGGGACGTGAAGATGCTGCTGGCCGTCCAGCGCCATCTCACTGCAGTGCAGGATGAGAACGGCGACAGCATCTTACACCTCGCCGTGATCCACCTCCATGCCCAGCTGGTGAGGGATCTGCTGCAGGTGACCGCGGGTGTGATTTCCGAGGACATCATCAACATGAGAAATGACCTCTACCAGACACCCTTGCACCTGGCGGTGATCACGAAGCAGGAGGACGTGGTAGAGGACCTGCTGCAGGCCGGGGCCGACCTGAGCCTGCTGGACCGCTTGGGCAACTCTGCACTGCACCTTGCCACCAAGGAGGGCCAGGACGGAATCCTCAGCATCCTGCTCAAGCACCGGAAGGCGCCGCCGCTGCTGGACCATCCCAACAGGGAAGGCCTCAATGCCATCCACATTGCCGTGACAAGCAACAGCCTGCCGTGTCTCTTGTTGCTGGTGGCCGCAGGCGCCAACGTGAATGCCCAGGAACAGAAGTCGGGGCGCACGGCGCTGCACCTGGCGGTGGAGCAGGACAATGTGTCCCTGGCCGGCTGCCTGCTGCTCGAGGGCGAAGCCCACGTGGACAGCACCACGTATGATGGGACCACAGCGCTGCACATCGCGGCAGGGCGAGGCTCCACCAGGCTGGCCGCGCTGCTCAAGGCTGCAGGGGCGGACCCCCTGGTGGAGAACTTCGAGCCCCTGTGCGACCTGGATGAGTCCTGGGAAAGGGCCGGAGAGGATGAAGGCGTGGTGCCGGGGACGACGCCACTGGACATGGCGGCCAGCTGGCAGGTGTTCGACATCCTAAACGGGAAGCCGTATGAACCCGAGATCACGGCCGATGATGTCCTGGCCCAAGGGGACATGAAGCTTCTGAGCGAAGAGGCCAAGCTGCAGCTCTACAAGCTGCTGGAAGTCCCCGACCCAGACAGAAACTGGGCCACGCTGGCCCACAAGCTGGGCCTGGGCATCCTGAACCACGCCTTCCGGCTGAGCCCCTCACCGTCCAAGACGCTCATGGACAACTATGAGGTCTCCGGGGGCACGGTCAAGGAGCTGGTGGAGGCCCTGGGACAGATGGGCTACACGGAAGCCATCGAAGTGGTCCAGGCCGCCTGCTGCAGCTCGGGGGCCCCCAGCCCTGTGAAGGGCACCACACAGGGCCCCCCGCCTGCCCTGTCGCTGTCCCCGAAGATGGATGAGCTTCGAGACCAGGACAGCATCTGTGACAGCGGTGTGGAGACCTCCTTCCGCAAGCTCAGCTTCACGGAGTCCCTGACGGGCGGCAGCCCCTTGCTAACCCTTAACAAAGGGCCCCCCAACTTTGGGCAGGACGGACCCATAGAGGGGAAGATCTAG

Related Sequences

XP_004866328.1 Protein

Nfkb1 PREDICTED: nuclear factor NF-kappa-B p105 subunit isoform X4 [Heterocephalus glaber]

Length: 971 aa      View alignments
>XP_004866328.1
MTEDDSYLGGHEQMFHLNPLTHAIFNPELFPPEMPLQTADGPFLQILEQPKQRGFRFRYVCEGPSHGGLPGASSEKNKKSYPQVKICNYVGPAKVIVQLVTNGKNVRLHAHSLVGKHCEDGVCTVTAGPKDMVTSFANLGILHVTKKKVFETLETRMTDACIRGYNPGLLVHPDLAYLQAEGGGGDRQLTDREKELIRQAALQQTKEMDLSVVRLMFTAFLPDSTGSFTRRLEPVVSDAIYDSKAPNASNLKIVRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEEENGGIWEGFGDFSPTDVHRQFAIVFKTPKYKDINITKPASVFVQLRRKSDLETSEPKPFLYYPEIKDKEEVQRKRQKLMPNFSDSFGGGGGAGAGGGGMFGGGGGGGGGGGAGAPGNAGPGYGFPHYGFPTYGGVAFHPGTTKSTTGMKHETVNTECDHDPAGCEACEDGEVIIAPELEEEAGAPSPGTHRAPLTGAVRREDEGTRFPDNLFLEKALQLAKRHANALFDYAVTGDVKMLLAVQRHLTAVQDENGDSILHLAVIHLHAQLVRDLLQVTAGVISEDIINMRNDLYQTPLHLAVITKQEDVVEDLLQAGADLSLLDRLGNSALHLATKEGQDGILSILLKHRKAPPLLDHPNREGLNAIHIAVTSNSLPCLLLLVAAGANVNAQEQKSGRTALHLAVEQDNVSLAGCLLLEGEAHVDSTTYDGTTALHIAAGRGSTRLAALLKAAGADPLVENFEPLCDLDESWERAGEDEGVVPGTTPLDMAASWQVFDILNGKPYEPEITADDVLAQGDMKLLSEEAKLQLYKLLEVPDPDRNWATLAHKLGLGILNHAFRLSPSPSKTLMDNYEVSGGTVKELVEALGQMGYTEAIEVVQAACCSSGAPSPVKGTTQGPPPALSLSPKMDELRDQDSICDSGVETSFRKLSFTESLTGGSPLLTLNKGPPNFGQDGPIEGKI