Sequence details NCBI ID: XM_004866088.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Piga
Gene Name phosphatidylinositol glycan anchor biosynthesis, class A, transcript variant X2
Entrez Gene ID 101724876

Database interlinks

Part of NW_004624829.1 (Scaffold)

For more information consult the page for NW_004624829.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PIGA ENSCPOG00000004028 (Guinea pig)

Gene Details

phosphatidylinositol glycan anchor biosynthesis, class A

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003634, Guinea pig)

Protein Percentage 89.05%
CDS Percentage 91.67%
Ka/Ks Ratio 0.33888 (Ka = 0.0595, Ks = 0.1755)

PIGA ENSG00000165195 (Human)

Gene Details

phosphatidylinositol glycan anchor biosynthesis, class A

External Links

Gene Match (Ensembl Protein ID: ENSP00000369820, Human)

Protein Percentage 88.84%
CDS Percentage 90.98%
Ka/Ks Ratio 0.2547 (Ka = 0.0571, Ks = 0.2242)

Piga ENSMUSG00000031381 (Mouse)

Gene Details

phosphatidylinositol glycan anchor biosynthesis, class A

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000107874, Mouse)

Protein Percentage 85.95%
CDS Percentage 86.85%
Ka/Ks Ratio 0.21392 (Ka = 0.0799, Ks = 0.3733)

Piga ENSRNOG00000003554 (Rat)

Gene Details

phosphatidylinositol glycan anchor biosynthesis, class A (Piga), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000045342, Rat)

Protein Percentage 86.11%
CDS Percentage 83.6%
Ka/Ks Ratio 0.1403 (Ka = 0.0836, Ks = 0.5958)

Genome Location

Sequence Coding sequence

Length: 1455 bp    Location: 141598..128586   Strand: -
Raw sequence   
>XM_004866088.1
ATGGCCTGTAGAGGAGGAGGTGGGGATGCCAAGGCTCCTTCAGCTCCACTCTTCCTGGTTAGCCCTGGAAGCTTTTCCACCTGTACAGCCCACTCTCATAATATATGCATGGTATCTGACTTTTTCTACCCAAACATGGGAGGAGTGGAAAGCCACATATACCAGCTCTCTCAGTGCCTGATTCAAAGAGGGCACAAGGTCATAATTGTCACCCATGCTTACGGAAATCGAAAAGGCATCCGTTACCTCACTAATGGGCTCAAAGTCTATTACTTGCCTCTGAAAGTCATGTACAACCAATCTACAGCCACGACCCTCTTTCACAGTCTGCCATTGCTCAGGTACATATTTGTTCGGGAGAGAGTCACGATAGTCCATTCCCATAGTTCTTTTTCTTCCATGGCCCATGATGCTCTCTTCCACGCCAAGACAATGGGGCTCCATACAGTCTTCACGGACCATTCCCTCTTTGGATTTGCTGATGTCAGCTCGGTGCTCACAAACAAGCTTCTAACTGTGTCGCTTTGTGACACAAACCACATCATTTGTGTCTCTTATACTAGTAAGGAAAATACTGTACTAAGAGCAGCACTGAATCCTGAAATAGTGTCCGTCATTCCTAATGCAGTAGATCCTACTGACTTCACTCCAGATCCATTTAGGAGGCATGATAGTATAACTATTGTTGTTATCAGCAGACTTGTTTACAGAAAAGGGACTGATTTGCTTTGTGGTATAATACCCGAGCTCTGTCAGAAATATCAAAATTTAAATTTCATAATTGGAGGAGAGGGACCAAAGAGAATCATTTTGGAAGAAGTACGGGAACGATACCAACTACATGACAGGGTGCATCTTTTGGGAGCTTTACAACACAAGGATGTTAGAAATGTCTTAGTTCAAGGACATATTTTTCTTAATACCTCCCTAACCGAAGCATTCTGCATGGCGATTGTGGAAGCAGCCAGTTGTGGTTTACAGGTTGTAAGTACCAAGGTTGGAGGAATTCCTGAGGTGCTTCCAGAAAATCTCATTGTTTTATGTGAACCTTCAGTAAAATCTTTGTGTGAAGGGTTGGAAAAGGCTATCTTCCAGCTGAAGTCAGGGACTCTTCCAACCCCAGAAAATATCCATAGCATAGTAAAGACTTTCTATACCTGGAGGAATGTTGCAGAAAGAACTGAAAAGGTGTATGAGCTGGTCTTGAAGGAAGATGTGTTGCCCATGGACAAGCGACTGGATAGGCTCATTTCTCACTGTGGCTCAGTAACAGGCCACATTTTTGCTTTGTTAGCTGTTTTCAACTATCTGTTCCTTATCTTCCTAAGATGGATCACTCCGGATTCTACCATTGATATTGCAATAGATGCCACTGGGCCAAGGGGTGCCTGGACTCACCACTCTCCTCACGGTGAAAAAAGGGGTGAGAATAAGAAGGTGTCTAAAACCAGGTAG

Related Sequences

XP_004866145.1 Protein

Piga PREDICTED: phosphatidylinositol N-acetylglucosaminyltransferase subunit A isoform X2 [Heterocephalus glaber]

Length: 484 aa      View alignments
>XP_004866145.1
MACRGGGGDAKAPSAPLFLVSPGSFSTCTAHSHNICMVSDFFYPNMGGVESHIYQLSQCLIQRGHKVIIVTHAYGNRKGIRYLTNGLKVYYLPLKVMYNQSTATTLFHSLPLLRYIFVRERVTIVHSHSSFSSMAHDALFHAKTMGLHTVFTDHSLFGFADVSSVLTNKLLTVSLCDTNHIICVSYTSKENTVLRAALNPEIVSVIPNAVDPTDFTPDPFRRHDSITIVVISRLVYRKGTDLLCGIIPELCQKYQNLNFIIGGEGPKRIILEEVRERYQLHDRVHLLGALQHKDVRNVLVQGHIFLNTSLTEAFCMAIVEAASCGLQVVSTKVGGIPEVLPENLIVLCEPSVKSLCEGLEKAIFQLKSGTLPTPENIHSIVKTFYTWRNVAERTEKVYELVLKEDVLPMDKRLDRLISHCGSVTGHIFALLAVFNYLFLIFLRWITPDSTIDIAIDATGPRGAWTHHSPHGEKRGENKKVSKTR