Sequence details NCBI ID: XM_004865286.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Tmem106b
Gene Name transmembrane protein 106B
Entrez Gene ID 101703812

Database interlinks

Part of NW_004624827.1 (Scaffold)

For more information consult the page for NW_004624827.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TMEM106B ENSCPOG00000005598 (Guinea pig)

Gene Details

transmembrane protein 106B

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005045, Guinea pig)

Protein Percentage 96.73%
CDS Percentage 94.79%
Ka/Ks Ratio 0.0809 (Ka = 0.0161, Ks = 0.1996)

TMEM106B ENSG00000106460 (Human)

Gene Details

transmembrane protein 106B

External Links

Gene Match (Ensembl Protein ID: ENSP00000379901, Human)

Protein Percentage 96.72%
CDS Percentage 93.31%
Ka/Ks Ratio 0.05012 (Ka = 0.0147, Ks = 0.2925)

Tmem106b ENSMUSG00000029571 (Mouse)

Gene Details

transmembrane protein 106B

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000031556, Mouse)

Protein Percentage 94.55%
CDS Percentage 89.45%
Ka/Ks Ratio 0.05198 (Ka = 0.0262, Ks = 0.5048)

Tmem106b ENSRNOG00000006206 (Rat)

Gene Details

transmembrane protein 106B (Tmem106b), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000008677, Rat)

Protein Percentage 93.82%
CDS Percentage 88.85%
Ka/Ks Ratio 0.06942 (Ka = 0.0339, Ks = 0.4883)

Genome Location

Sequence Coding sequence

Length: 828 bp    Location: 7044233..7018864   Strand: -
Raw sequence   
>XM_004865286.1
ATGGGAAAGTCTCTTTCTCATTTGCCTTTGCATCCAAATAAAGAAGATACTTATGATGGAGTCACATCAACCGAAAATATGAGGACTGGATTGGTTAATAATGAAGTCCATAATGAAGATGGAAGAAATGGAGATGTCTCTCAGTTTCCATATGTGGAATTTACAGGAAGAGATAGTGTCACTTGCCCCACTTGTCAAGGAACAGGAAGAATTCCTAGGGGACAAGAAAACCAACTGGTGGCATTGATTCCATATAGTGATCAGAGATTAAGGCCAAGAAGAACGAAGCTGTACGTGATGGCATCTGTGTTTTTCTGTCTGCTCCTTTCTGGATTGGCTGTGTTTTTCCTTTTCCCTCGATCCATTGATGTGAAGTACATTGGTGTAAAATCAGCATATGTCAGTTATGATGATCAAAAGCGAACAATATATTTAAATATCACAAATACACTAAATATAACAAACAATAACTACTATTCTGTTGAAGTTGAAAACATCACTGCTCAAGTTCAGTTTTCAAAAACAGTTATTGGAAAGGCACGCTTAAACAACATAACTAGTATAGGTCCACTCGATATGAAACAGATTGATTATACAGTACCTACTGTCATAGCAGAGGAAATGAGTTATATGTTTGATTTTTGTACACTGATATCCATTAAAGTACATAACATAGTACTCATGATGCAAGTTACTGTCACTACAACATACTTTGGCCACTCTGAACAGATATCCCAGGAGAGGTACCAATATGTAGACTGTGGAAGAAACACAACTTACCAGTTGGGGCAGTCTGAATATCTAAATGTCCTTCAGCCACAACAGTAA

Related Sequences

XP_004865343.1 Protein

Tmem106b PREDICTED: transmembrane protein 106B [Heterocephalus glaber]

Length: 275 aa      View alignments
>XP_004865343.1
MGKSLSHLPLHPNKEDTYDGVTSTENMRTGLVNNEVHNEDGRNGDVSQFPYVEFTGRDSVTCPTCQGTGRIPRGQENQLVALIPYSDQRLRPRRTKLYVMASVFFCLLLSGLAVFFLFPRSIDVKYIGVKSAYVSYDDQKRTIYLNITNTLNITNNNYYSVEVENITAQVQFSKTVIGKARLNNITSIGPLDMKQIDYTVPTVIAEEMSYMFDFCTLISIKVHNIVLMMQVTVTTTYFGHSEQISQERYQYVDCGRNTTYQLGQSEYLNVLQPQQ