Sequence details NCBI ID: XM_004865269.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Tfec
Gene Name transcription factor EC, transcript variant X1
Entrez Gene ID 101697964

Database interlinks

Part of NW_004624827.1 (Scaffold)

For more information consult the page for NW_004624827.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TFEC ENSCPOG00000012369 (Guinea pig)

Gene Details

transcription factor EC

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011131, Guinea pig)

Protein Percentage 86.74%
CDS Percentage 89.61%
Ka/Ks Ratio 0.39983 (Ka = 0.0844, Ks = 0.211)

TFEC ENSG00000105967 (Human)

Gene Details

transcription factor EC

External Links

Gene Match (Ensembl Protein ID: ENSP00000265440, Human)

Protein Percentage 86.02%
CDS Percentage 87.46%
Ka/Ks Ratio 0.31656 (Ka = 0.096, Ks = 0.3034)

Tfec ENSMUSG00000029553 (Mouse)

Gene Details

transcription factor EC

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000031533, Mouse)

Protein Percentage 75.9%
CDS Percentage 79.98%
Ka/Ks Ratio 0.29331 (Ka = 0.1604, Ks = 0.5469)

Tfec ENSRNOG00000006066 (Rat)

Gene Details

transcription factor EC (Tfec), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000008156, Rat)

Protein Percentage 78.06%
CDS Percentage 80.46%
Ka/Ks Ratio 0.2374 (Ka = 0.1423, Ks = 0.5995)

Genome Location

Sequence Coding sequence

Length: 840 bp    Location: 3472179..3497833   Strand: +
Raw sequence   
>XM_004865269.1
ATGATGAAGGAAAAAGAGAAAACCATTGCTATTGTGAAGGTTATAGACCCTTCAAAGTTAAAACTGTTATCAGGAAGTATTTTGGATGTATATAGTGATGAACAGGGAATTTCACCAATTAATATGGGGCTTACAAGTGGTTCCTGTCCAGTTAGTCTACCAATGAAAAATAAAATTACAGAAGCTGACACCAGAGCGTTGGCAAAAGAGAGACAAAAAAAGGACAATCACAACCTCATTGAAAGAAGAAGAAGGTATAATATTAATTACCGAATCAAGGAGCTTGGCACTCTTATTCCGAAGTCTAATGATCCTGATACGCGCTGGAACAAAGGAACCATTCTGAAAGCATCCGTGGAGTACATCAAGTGGCTACAAAAAGAACAACAGCGAGCCCGAGAGTTAGAACACAGGCAGAAGACATTAGAGCAGGCTAACAGGCGACTTCTACTCCGGATTCAGGAACTAGAAATACAGGCTCATGCCCATGGTCTGCCAACCCTGGCTTCCCTTGGCACAGTTGATTTAGGTGCTCACCTCACCAAACAGCAGACTCCTGAGCAGAATTCAGTAGACTATTGCTGGCAACTGACTCCATCTCAGGGGCCAAGCCCCAAGCTCTGTGATCAAGCTATTGCCTTCTCTGATCCTTTGTCACACTTCACAGATTTATCATTTACTGCTGCTTTGAAAGAGGAGCAAAGATTGGATGGCATGCTGCTGGATGACACAGTATCCCCATTTGGAACAGATCCACTGCTATCTGCTGCTTCCCCTGCAGTTTCTAAATCCAGCAGTAGAAGAAGTAGCTTCAGCTCAGAGGATGGTGAGGAGTTATAA

Related Sequences

XP_004865326.1 Protein

Tfec PREDICTED: transcription factor EC isoform X1 [Heterocephalus glaber]

Length: 279 aa      View alignments
>XP_004865326.1
MMKEKEKTIAIVKVIDPSKLKLLSGSILDVYSDEQGISPINMGLTSGSCPVSLPMKNKITEADTRALAKERQKKDNHNLIERRRRYNINYRIKELGTLIPKSNDPDTRWNKGTILKASVEYIKWLQKEQQRARELEHRQKTLEQANRRLLLRIQELEIQAHAHGLPTLASLGTVDLGAHLTKQQTPEQNSVDYCWQLTPSQGPSPKLCDQAIAFSDPLSHFTDLSFTAALKEEQRLDGMLLDDTVSPFGTDPLLSAASPAVSKSSSRRSSFSSEDGEEL