Details from NCBI annotation

Gene Symbol Prrx1
Gene Name paired related homeobox 1
Entrez Gene ID 101710302

Database interlinks

Part of NW_004624826.1 (Scaffold)

For more information consult the page for NW_004624826.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PRRX1 ENSCPOG00000014515 (Guinea pig)

Gene Details

paired related homeobox 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013080, Guinea pig)

Protein Percentage 99.59%
CDS Percentage 97.4%
Ka/Ks Ratio 0.01368 (Ka = 0.0017, Ks = 0.1277)

PRRX1 ENSG00000116132 (Human)

Gene Details

paired related homeobox 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000239461, Human)

Protein Percentage 98.78%
CDS Percentage 95.78%
Ka/Ks Ratio 0.03075 (Ka = 0.0055, Ks = 0.1797)

Prrx1 ENSMUSG00000026586 (Mouse)

Gene Details

paired related homeobox 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000027878, Mouse)

Protein Percentage 99.18%
CDS Percentage 94.56%
Ka/Ks Ratio 0.01384 (Ka = 0.0036, Ks = 0.262)

Prrx1 ENSRNOG00000003720 (Rat)

Gene Details

paired related homeobox 1 (Prrx1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000004950, Rat)

Protein Percentage 99.18%
CDS Percentage 93.88%
Ka/Ks Ratio 0.01158 (Ka = 0.0036, Ks = 0.3109)

Genome Location

Sequence Coding sequence

Length: 738 bp    Location: 8361060..8433213   Strand: +
>XM_004865244.1
ATGACCTCCAGCTACGGGCACGTTCTGGAGCGGCAGCCGGCGCTGGGCAGCCGCTTGGACAGCCCGGGCAACCTCGACACCCTGCAGGCCAAAAAGAACTTCTCCGTCAGTCACCTGCTAGACCTGGAGGAGGCCGGGGACATGGTGGCGGCGCAGGCAGACGAGAGCGTGGGCGAGGCGGGCCGGAGCCTGCTGGAGTCTCCGGGTCTCACCAGCGGCAGCGACACCCCGCAGCAGGACAATGATCAGCTGAACTCAGAGGAGAAAAAGAAGAGAAAGCAACGAAGGAACAGGACAACCTTCAACAGCAGTCAGCTGCAGGCTTTGGAGCGTGTCTTTGAGCGGACACACTACCCTGATGCTTTTGTGCGAGAAGATCTTGCCCGCCGGGTGAACCTCACTGAGGCCAGAGTGCAGGTGTGGTTTCAGAACCGAAGAGCCAAGTTCCGCAGGAATGAAAGAGCCATGCTGGCCAATAAAAACGCTTCCCTCCTCAAATCCTACTCAGGAGATGTGACTGCTGTGGAGCAGCCCATCGTACCTCGTCCTGCTCCCAGGCCCACCGATTATCTCTCCTGGGGGACAGCTTCTCCGTACAGCGCCATGGCTACTTATTCTGCCACATGTGCCAACAATAGCCCTGCACAGGGTGTGAACATGGCCAACAGCATTGCCAACCTGAGACTGAAGGCCAAGGAATATAGTTTACAGAGGAACCAGGTGCCAACAGTCAACTGA

Related Sequences

XP_004865301.1 Protein

Prrx1 PREDICTED: paired mesoderm homeobox protein 1 [Heterocephalus glaber]

Length: 245 aa      View alignments
>XP_004865301.1
MTSSYGHVLERQPALGSRLDSPGNLDTLQAKKNFSVSHLLDLEEAGDMVAAQADESVGEAGRSLLESPGLTSGSDTPQQDNDQLNSEEKKKRKQRRNRTTFNSSQLQALERVFERTHYPDAFVREDLARRVNLTEARVQVWFQNRRAKFRRNERAMLANKNASLLKSYSGDVTAVEQPIVPRPAPRPTDYLSWGTASPYSAMATYSATCANNSPAQGVNMANSIANLRLKAKEYSLQRNQVPTVN