Sequence details NCBI ID: XM_004865211.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Dcaf6
Gene Name DDB1 and CUL4 associated factor 6, transcript variant X5
Entrez Gene ID 101726615

Database interlinks

Part of NW_004624826.1 (Scaffold)

For more information consult the page for NW_004624826.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

DCAF6 ENSCPOG00000013095 (Guinea pig)

Gene Details

DDB1 and CUL4 associated factor 6

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011787, Guinea pig)

Protein Percentage 78.74%
CDS Percentage 79.62%
Ka/Ks Ratio 0.34618 (Ka = 0.1775, Ks = 0.5127)

DCAF6 ENSG00000143164 (Human)

Gene Details

DDB1 and CUL4 associated factor 6

External Links

Gene Match (Ensembl Protein ID: ENSP00000356814, Human)

Protein Percentage 90.54%
CDS Percentage 89.11%
Ka/Ks Ratio 0.12817 (Ka = 0.0487, Ks = 0.3801)

Dcaf6 ENSMUSG00000026571 (Mouse)

Gene Details

DDB1 and CUL4 associated factor 6

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000027856, Mouse)

Protein Percentage 87.86%
CDS Percentage 85.51%
Ka/Ks Ratio 0.12867 (Ka = 0.0691, Ks = 0.5371)

DCAF6 ENSRNOG00000003078 (Rat)

Gene Details

Protein Dcaf6; Similar to IQ motif and WD repeats 1 (Predicted)

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000004199, Rat)

Protein Percentage 87.86%
CDS Percentage 85.55%
Ka/Ks Ratio 0.12771 (Ka = 0.0678, Ks = 0.5307)

Genome Location

Sequence Coding sequence

Length: 2382 bp    Location: 5982157..6082484   Strand: +
Raw sequence   
>XM_004865211.1
ATGAAGGTTTTGACAACAATTCGTTCTGGCCATCGAGCAAATATATTTAGTGCAAAGTTCTTACCATGCACAAATGATAAGCAGATTGTATCCTGCTCTGGAGATGGAGTTATATTTTATACTAATGTTGAGCAAGATGCGGAAACCAACAGACAGTGCCAGTTTACGTGCCATTATGGAACTACCTATGAGATTATGACTGTACCAAATGATCCTTACACTTTTCTGTCCTGTGGTGAAGATGGAACTGTTAGGTGGTTTGACACGCGCATCAAAACTAGCTGCACAAAAGAAGATTGCAAAGATGATATTTTAATTAACTGTCGGCGTGCTGCCACATCAGTTGCTATTTGTCCACCAGTACCGTATTATCTCGCTGTTGGTTGTTCTGATAGCTCAGTACGAATATATGATCGGAGAATGCTGGGAACAAGAGCTACAGGGAATTATGCAGGTCGAGGGACTACTGGAATGGTTGCCCGCTTTATCCCTTCCCATCTGAACAATAAGTCCTGTAGAGTGACGTCTCTGTGTTATAGCGAGGACGGCCAAGAGATTCTCGTTAGTTACTCTTCAGATTACATCTATCTTTTCGACCCAAAAGATGATACAGCACGAGAACTGAAGACTCCTTCTACAGAAGAGAGGCGAGAAGAGTTACGGCAGCCTCCAGTTAAGCGTTTGCGACTTCGTGGTGATTGGTCAGATACTGGACCCAGAGCAAGGCCCGAGAGTGAACGAGAACGAGATGGAGAGCAAAGTCCCAATGTATCATTGATGCAGAGAATGTCTGATATGTTATCAAGATGGTTTGAAGAAGCAAGTGAAGTTGCACAAAGCAATAGAGGACGAGGAAGATCTCGCCCCAGAGGTGGAACAAGTCAGTCAGATGTTTCCACTCTTCCTGCGGTCCCATCGAGTCCTGATCTGGAAGCAGGTGAAACTGCAATGGACGTAGATGCCCCAGCCGAGCAGTTTCTTCAGCCTTCTACATCCTCTGCCACGTCTGCTCAGGCTCATTCAGTAGGCTTTTCCACCGGAAGCCCCCACTCGACTTCTTTGCTGTCTTCTCCAGATAGTGAGCAAAGGCAGTCCGCAGAAGCTTCTGGACACCATGCGCATCATCAGTCTGATTCTCCTTCTTCTGTGGTTAACAAACAGCTCGGATCCATGTCACTTGACGAGCAACAGGATAACAATAATGAAAAGCTGAGCCCTAAACCAGGGACAGGTGAACCAGTTTTAAGTTTGCACTACAGCACAGAAGGAACAACTACAAGCACAATAAAACTGAACTTTACAGATGAATGGAGCAGTACTGCCTCGAGTTCTAGAGGAAATGGAAGCCATTGCAAATCTGAGGATCAGGAGGAATCCTTGGTCCCACAGAGCTCAGTACAAACACTAGAAGGAGACAGTGAGACAAAAGCTCCTGAAGAATCATTAGAGAATGTGACAAAAGGTCAGGAAGGTACAACTGCAGAAAACCAAGTTCGGGATCACATAGACACAGCACAATTAGATAACCTTGCACCTGAGCCATCAGATCCCACCTCAGGAGAAAGGAGTGCTCTCACTCCGGGTAGCCCTTGCGGAATTCCAGCAGAGCCCACTTTGTCTGAGAGAGCCAAGGAAGCGGAGCCTTCAGCTCAGACGAGCAGTGAGGGCACCACCAGTCCCGAGCCCCAGGCCCAGACAGAAGCCATCAGGCCTTCACCTCATGAGGAGTCATCAGCCCGGGACTCTGTTCTGCAGGACACAGATGACAGCGACGATGACCCCGTCCTGATCCCAGGGGCAAGGTACCGAGCAGCACCTGGGGATAGACGCTCTGCTGTTGCACGTATTCAGGAGTTCTTCCGGCGGAGAAAAGAAAGGAAAGAAATGGAAGAGCTGGATTCCTTAAACATTAGAAGGCCACTAGTAAAGATGGTTTATAAGGGTCATCGCAACTCCAGGACAATGATAAAAGAAGCCAATTTCTGGGGTGCTAACTTTGTGATGAGCGGGTCTGACTGCGGCCACATCTTCATCTGGGATCGGCATACTGCTGAGCACCTGATGCTTCTGGAGGCAGACAACCACGTGGTGAACTGTCTGCAGCCACACCCATTTGACCCGATTCTAGCCTCATCTGGCATAGATTATGACATAAAGATCTGGTCACCACTAGAGGAGTCACGGTTTTTTAATCGAAAACTTGCTGATGAAGTTATAACTCGAAACGAACTCATGTTGGAGGAGACTAGAAACACCATTACAGTTCCAGCCTCTTTCATGTTGAGGATGTTGGCTTCACTGAATCATATCCGAGCTGACCGCTTGGAGGGTGACAGATCAGAAGGCTCCGGTCAGGAGAATGAAAACGAAGATGAAGAATAA

Related Sequences

XP_004865268.1 Protein

Dcaf6 PREDICTED: DDB1- and CUL4-associated factor 6 isoform X5 [Heterocephalus glaber]

Length: 793 aa      View alignments
>XP_004865268.1
MKVLTTIRSGHRANIFSAKFLPCTNDKQIVSCSGDGVIFYTNVEQDAETNRQCQFTCHYGTTYEIMTVPNDPYTFLSCGEDGTVRWFDTRIKTSCTKEDCKDDILINCRRAATSVAICPPVPYYLAVGCSDSSVRIYDRRMLGTRATGNYAGRGTTGMVARFIPSHLNNKSCRVTSLCYSEDGQEILVSYSSDYIYLFDPKDDTARELKTPSTEERREELRQPPVKRLRLRGDWSDTGPRARPESERERDGEQSPNVSLMQRMSDMLSRWFEEASEVAQSNRGRGRSRPRGGTSQSDVSTLPAVPSSPDLEAGETAMDVDAPAEQFLQPSTSSATSAQAHSVGFSTGSPHSTSLLSSPDSEQRQSAEASGHHAHHQSDSPSSVVNKQLGSMSLDEQQDNNNEKLSPKPGTGEPVLSLHYSTEGTTTSTIKLNFTDEWSSTASSSRGNGSHCKSEDQEESLVPQSSVQTLEGDSETKAPEESLENVTKGQEGTTAENQVRDHIDTAQLDNLAPEPSDPTSGERSALTPGSPCGIPAEPTLSERAKEAEPSAQTSSEGTTSPEPQAQTEAIRPSPHEESSARDSVLQDTDDSDDDPVLIPGARYRAAPGDRRSAVARIQEFFRRRKERKEMEELDSLNIRRPLVKMVYKGHRNSRTMIKEANFWGANFVMSGSDCGHIFIWDRHTAEHLMLLEADNHVVNCLQPHPFDPILASSGIDYDIKIWSPLEESRFFNRKLADEVITRNELMLEETRNTITVPASFMLRMLASLNHIRADRLEGDRSEGSGQENENEDEE