Details from NCBI annotation

Gene Symbol Lrrc52
Gene Name leucine rich repeat containing 52
Entrez Gene ID 101716474

Database interlinks

Part of NW_004624826.1 (Scaffold)

For more information consult the page for NW_004624826.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LRRC52 ENSCPOG00000015344 (Guinea pig)

Gene Details

leucine rich repeat containing 52

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013829, Guinea pig)

Protein Percentage 91.36%
CDS Percentage 92.03%
Ka/Ks Ratio 0.171 (Ka = 0.0423, Ks = 0.2473)

LRRC52 ENSG00000162763 (Human)

Gene Details

leucine rich repeat containing 52

External Links

Gene Match (Ensembl Protein ID: ENSP00000294818, Human)

Protein Percentage 83.71%
CDS Percentage 88.18%
Ka/Ks Ratio 0.26211 (Ka = 0.0842, Ks = 0.3213)

Lrrc52 ENSMUSG00000040485 (Mouse)

Gene Details

leucine rich repeat containing 52

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000047213, Mouse)

Protein Percentage 75.08%
CDS Percentage 80.72%
Ka/Ks Ratio 0.25824 (Ka = 0.15, Ks = 0.5808)

Lrrc52 ENSRNOG00000004356 (Rat)

Gene Details

leucine rich repeat containing 52 (Lrrc52), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000005768, Rat)

Protein Percentage 75.4%
CDS Percentage 81.47%
Ka/Ks Ratio 0.22136 (Ka = 0.1372, Ks = 0.6198)

Genome Location

Sequence Coding sequence

Length: 948 bp    Location: 3884087..3904825   Strand: +
>XM_004865182.1
ATGTCCCTTGCTTCAGGCCCTGGCCCTGGATGGTTACTCTTTTCCTTTGGAATGGGGCTGGTATCGGGATCAAAGTGTCCACATAACTGTCTGTGTCAAGCCCAAGAAGTGAACTGCACAGCGATGCACTTGACGGAATACCCCCCTGACATCCCCCTGAACACCCGGAGGCTGTACCTGAACAATAACAGAATCACCAGTTTGCCAGCCATGCATCTAGGACTTCTCAGTGACCTTGTTTACCTGGACTGTCACAACAACCGGATTCAAGAGGTGATGGATTACACCTTCATCGGGGTCTTCAGACTCATCTACCTTGACCTCAGCTCCAACAACCTAACCTCCATCTCCCCCTTCAGTTTCTCGGTGCTCAGCAACCTGGTGCAGCTCAACCTTGCCAACAACCCTCACCTATCATCTCTCGACAAGTACACCTTTGCCAATACCAGCTCTTTGAGGTACCTGGACCTCAGAAACACTGGCTTGCAGACCCTGGACCATGCTGCCCTGCACCATCTTGCAGTACTCCAGACCCTGTACCTGAGTGGAAACCCCTGGAAGTGTAACTGCTCCTTCATGGACTTCGCCATCTACTTAATAGTGTCCCATCTGGACCCCCCAGATAATGAAAATGCCACGTGCGTGGAGCCCACAGAGCTGGCAGGGTGGCCCATCACACGCGTGGGGAACCCACTCCGGTACATGTGCCTCACGCACCTGGACCGCCAAGACTACATCTTCCTGCTGCTCATCGGCTTCTGCATCTTCGCCGCTGGCACGGTAGCTGCCTGGCTCACCGGCATGTGCGCAGGGCTCTACCAGAACGCCCGCCGCAGGGCCAGCGAGGACGAGGCCGAGGCCGAGGCCGGGCACAGAGTGGAAGTCACCGGGCGGATTTTTCCAACCAAGGAGAGATCGGGCCAGGGTGGGTTCCCTCAGCTGATTTAG

Related Sequences

XP_004865239.1 Protein

Lrrc52 PREDICTED: leucine-rich repeat-containing protein 52 [Heterocephalus glaber]

Length: 315 aa      View alignments
>XP_004865239.1
MSLASGPGPGWLLFSFGMGLVSGSKCPHNCLCQAQEVNCTAMHLTEYPPDIPLNTRRLYLNNNRITSLPAMHLGLLSDLVYLDCHNNRIQEVMDYTFIGVFRLIYLDLSSNNLTSISPFSFSVLSNLVQLNLANNPHLSSLDKYTFANTSSLRYLDLRNTGLQTLDHAALHHLAVLQTLYLSGNPWKCNCSFMDFAIYLIVSHLDPPDNENATCVEPTELAGWPITRVGNPLRYMCLTHLDRQDYIFLLLIGFCIFAAGTVAAWLTGMCAGLYQNARRRASEDEAEAEAGHRVEVTGRIFPTKERSGQGGFPQLI