Details from NCBI annotation

Gene Symbol Lmx1a
Gene Name LIM homeobox transcription factor 1, alpha
Entrez Gene ID 101715780

Database interlinks

Part of NW_004624826.1 (Scaffold)

For more information consult the page for NW_004624826.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LMX1A ENSCPOG00000025320 (Guinea pig)

Gene Details

LIM homeobox transcription factor 1, alpha

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000016572, Guinea pig)

Protein Percentage 98.17%
CDS Percentage 96.16%
Ka/Ks Ratio 0.05154 (Ka = 0.0081, Ks = 0.1577)

LMX1A ENSG00000162761 (Human)

Gene Details

LIM homeobox transcription factor 1, alpha

External Links

Gene Match (Ensembl Protein ID: ENSP00000340226, Human)

Protein Percentage 97.38%
CDS Percentage 93.63%
Ka/Ks Ratio 0.03873 (Ka = 0.0116, Ks = 0.2985)

Lmx1a ENSMUSG00000026686 (Mouse)

Gene Details

LIM homeobox transcription factor 1 alpha

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000028003, Mouse)

Protein Percentage 97.38%
CDS Percentage 91.8%
Ka/Ks Ratio 0.02542 (Ka = 0.0114, Ks = 0.4465)

Lmx1a ENSRNOG00000004642 (Rat)

Gene Details

LIM homeobox transcription factor 1 alpha (Lmx1a), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000006163, Rat)

Protein Percentage 97.64%
CDS Percentage 91.27%
Ka/Ks Ratio 0.02198 (Ka = 0.0104, Ks = 0.4718)

Genome Location

Sequence Coding sequence

Length: 1149 bp    Location: 3688178..3543191   Strand: -
>XM_004865181.1
ATGCTGGACGGCCTGAAGATGGAGGAGAACTTCCAAAGCGCGATTGAGACCTCGGCCTCCTTCTCCTCGCTGCTCGGCAGAGCGGTGAGTCCGAAGTCTGTCTGCGAGGGCTGTCAGCGGGTCATCTCGGACAGGTTTCTGCTGCGGCTCAACGACAGCTTCTGGCACGAGCAGTGCGTGCAGTGCGCCTCCTGCAAAGAACCCCTGGAGACCACCTGCTTCTACCGGGACAAGAAACTCTACTGCAAGTACGACTACGAGAAGTTATTTGCTGTCAAATGTGGGGGCTGCTTTGAGGCCATCGCACCCAATGAGTTTGTGATGCGAGCCCAGAAGAGCGTGTACCACCTGAGCTGCTTCTGCTGCTGTGTCTGTGAGCGGCAGCTTCAGAAGGGCGATGAGTTTGTCCTGAAGGAGGGGCAGCTGCTCTGCAAAGGGGACTATGAGAAGGAGCGGGAACTGCTCAGCCTGGTGAGCCCAGCGGCCTCAGACTCAGGCAAAAGTGATGATGAAGAAAGTCTTTGCAAGTCAGCCCAGGGGACAGGGAAAGGAGCCACTGAGGATGGCAAGGACCATAAGCGTCCCAAACGTCCCAGAACCATCTTGACGACGCAGCAGAGGAGAGCGTTCAAGGCCTCGTTTGAAGTATCCTCCAAGCCCTGCAGGAAGGTGAGGGAGACTCTGGCTGCAGAGACTGGGCTGAGTGTCCGTGTTGTCCAGGTGTGGTTCCAGAACCAGAGAGCTAAGATGAAGAAGCTGGCCAGGCGACAGCAGCAACAGCAGCAAGACCAGCAGAACACACAGAGGCTCAGTTCTGCTCAGACAAATGGTGGTGGGAGTGCTGGCCTGGAAGGGATCATGAACCCCTACACACCTCTACCCACCCCACAGCAGCTCCTGGCCATCGAGCAGAGTGTCTACACCTCTGATCCCTTCCGGCAGGGCCTCACCCCACCCCAGATGCCTGGAGATCACATGCACCCCTATGGTGCTGAGCCCCTTTTCCATGACCTGGATAGTGACGACACTTCCCTCAGTAACCTGGGTGACTGTTTCCTAGCAACCTCAGAAGCCGGGCCCCTGCAGTCCAGAGTGGGAAACCCCATTGACCACCTGTACTCCATGCAGAATTCTTACTTCACCTCTTGA

Related Sequences

XP_004865238.1 Protein

Lmx1a PREDICTED: LIM homeobox transcription factor 1-alpha [Heterocephalus glaber]

Length: 382 aa      View alignments
>XP_004865238.1
MLDGLKMEENFQSAIETSASFSSLLGRAVSPKSVCEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYDYEKLFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKEGQLLCKGDYEKERELLSLVSPAASDSGKSDDEESLCKSAQGTGKGATEDGKDHKRPKRPRTILTTQQRRAFKASFEVSSKPCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKLARRQQQQQQDQQNTQRLSSAQTNGGGSAGLEGIMNPYTPLPTPQQLLAIEQSVYTSDPFRQGLTPPQMPGDHMHPYGAEPLFHDLDSDDTSLSNLGDCFLATSEAGPLQSRVGNPIDHLYSMQNSYFTS