Details from NCBI annotation

Gene Symbol Atf6
Gene Name activating transcription factor 6, transcript variant X1
Entrez Gene ID 101706597

Database interlinks

Part of NW_004624826.1 (Scaffold)

For more information consult the page for NW_004624826.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ATF6 ENSCPOG00000010325 (Guinea pig)

Gene Details

activating transcription factor 6

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009272, Guinea pig)

Protein Percentage 91.34%
CDS Percentage 93.36%
Ka/Ks Ratio 0.30658 (Ka = 0.0449, Ks = 0.1463)

ATF6 ENSG00000118217 (Human)

Gene Details

activating transcription factor 6

External Links

Gene Match (Ensembl Protein ID: ENSP00000356919, Human)

Protein Percentage 90.73%
CDS Percentage 90.37%
Ka/Ks Ratio 0.17434 (Ka = 0.0492, Ks = 0.2821)

Atf6 ENSMUSG00000026663 (Mouse)

Gene Details

activating transcription factor 6

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000027974, Mouse)

Protein Percentage 85.95%
CDS Percentage 85.19%
Ka/Ks Ratio 0.1543 (Ka = 0.0776, Ks = 0.5026)

Atf6 ENSRNOG00000024632 (Rat)

Gene Details

activating transcription factor 6 (Atf6), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000032766, Rat)

Protein Percentage 86.72%
CDS Percentage 85.14%
Ka/Ks Ratio 0.13996 (Ka = 0.0729, Ks = 0.5209)

Genome Location

Sequence Coding sequence

Length: 1977 bp    Location: 189778..412532   Strand: +
>XM_004865155.1
ATGGAGTCACCTTTTAGCCCCGGACTCTGCCACAGACCAGATGAAGGTTGGGATTCTACACTCTTTGCTGAACTTGGTTATTTCACAGACATGGATGAGCTGCAATTGGATGCAGCAAGTGAAACCTTTGAAAGTAATTTTGATCATCTTGATTTTGATTTTGATTTGTTGCCTTGGGAGTCAGACGTGTGGAGCATAAACAGCCAGTTCTGTACAGTTAAAGATATTAAGGCAGAACCTCAGCCACTTTCTCCAGCTTCAAGTTGTTCGGTCTCATCTCCTCAGTCAGTGGAGTCTTGTTCTTCAACTCAGCATGTCCCTGAGGAGTTGGATTTGTCTTCTAGTTCCCAGATGTCTCCTCTTTCCTTGTATGGTGAAAACTGTAATAGTCCATCCTCAGGAGAGCCACTGAAGGAAGACAAACCTATTATTGGTCCTAGAAACAAAACTGAAAATGGAATGACTCCAAAGAAAAAAATTACATTAAGTTCAAAACCTTCAATTCAGCCCAAGCCTTTATTACTTCCAGCAGCACCCAAGGCTCAAACAAACTCCAGTGTTCCAGCAAAAACCATCATTATTCAGACACTGCCAACACTTGTGCCACTGGCAAAGCAGCAGCCAGTTATCAGTATACAACCTGCACCCAGTAAAGGTCAGACTGTTTTGCTCTCTCAGCCTGCTGTGGTACAACTTCAGGCTCCTGGAGTTCTGCCCTCTGCTCAGCCTGTCCTTGCTGTCTCTGGGGGAGCAGCACAGCTACCTAATCATGTGGTGAATGTGGTGCCAGCCCCTGTGGTGAGCAGCTCAGTGAATGGGAAACTTTCTGCGACGAGACCTGTCCTACAGAGTACCACGAGAAGTGTGGGTTCAGATTTTGCTGTGCTAAGAAGACAGCAACGTATGATAAAAAATCGAGAGTCTGCTTGTCAGTCGCGCAAGAAGAAGAAAGAATATATGCTAGGGCTGGAGGCAAGATTAAAGGCTGCTCTTTCAGAGAATGAGCAACTGAAGAAAGAGAATGGATCATTGAAGCGGCAGCTAGATGAAATTGTATCAGAGAACCAGAGGCTTAAAGTTCCCAGTCCAAAGCGAAGAGCTGTCTGTGTGATGATAGTCTTGGCATTTATAATACTGAACTATGGACCCATGAGCATGCTGGAACAGGATCCCAGGAGAATGAACCCTAATGTGAGCCCTGCAAATCAAAGGAGGCATCTTTTAGGATTTTCTGCTAAAGAAGAACAAGGCACATCAAATGGTATCATCCAGCAAAACAGCTACAGATATGATCATTCTGTTTCAAATGACAAAGCCCTAATGGTACTAACTGAAGAACCACTACTTTATATTCCTCCACCTCCTTGTCAACCTCTGATTAATACAACCGAGTCACTCAGGTTAAATCATGAACTTCGAGGTTGGGTTCACAGACATGAAGTGGAAAGGACCAAGTCAAGAAGAATGACAAATAATCAACAGAAGACCCGTATTCTTCAGGGTGCTCTTGAACAGAGCTCCAATTCTCAGCTGATGCCTGTTCAATACACAGAAACCACTAGTATCAGTAGGAACTCGGGGAGTGAATTACAAGTATATTACGCTTCACCCAGAAGTTATCAAGACTTCTTTGAAGCTATTCGCAGAAAGGGAGACACATTTTATGTTGTGTCATTTCGAAGGGATCACCTACTGTTACCAGCTACTACCCATAACAAGACCACAAGACCAAAAATGTCAATTGTATTACCAGCAATTAACATAAATGAAAATGTGATCAATGGGCAGGATTATGAAGTGATGATGCAGATTGACTGCCAGGTGATGGACACCCGGATCCTCCACATCAAAAGCTCCTCTGTTCCTCCTTACCTCCGAGATCAGCAGAGGAATCAAACCAGCACCTTCTTTGGTTCCCCTCCAGCAGCCACAGAGGCTACCCACGTTGTCAGCACCATCCCTGAGTCGTTACAGTGA

Related Sequences

XP_004865212.1 Protein

Atf6 PREDICTED: cyclic AMP-dependent transcription factor ATF-6 alpha isoform X1 [Heterocephalus glaber]

Length: 658 aa      View alignments
>XP_004865212.1
MESPFSPGLCHRPDEGWDSTLFAELGYFTDMDELQLDAASETFESNFDHLDFDFDLLPWESDVWSINSQFCTVKDIKAEPQPLSPASSCSVSSPQSVESCSSTQHVPEELDLSSSSQMSPLSLYGENCNSPSSGEPLKEDKPIIGPRNKTENGMTPKKKITLSSKPSIQPKPLLLPAAPKAQTNSSVPAKTIIIQTLPTLVPLAKQQPVISIQPAPSKGQTVLLSQPAVVQLQAPGVLPSAQPVLAVSGGAAQLPNHVVNVVPAPVVSSSVNGKLSATRPVLQSTTRSVGSDFAVLRRQQRMIKNRESACQSRKKKKEYMLGLEARLKAALSENEQLKKENGSLKRQLDEIVSENQRLKVPSPKRRAVCVMIVLAFIILNYGPMSMLEQDPRRMNPNVSPANQRRHLLGFSAKEEQGTSNGIIQQNSYRYDHSVSNDKALMVLTEEPLLYIPPPPCQPLINTTESLRLNHELRGWVHRHEVERTKSRRMTNNQQKTRILQGALEQSSNSQLMPVQYTETTSISRNSGSELQVYYASPRSYQDFFEAIRRKGDTFYVVSFRRDHLLLPATTHNKTTRPKMSIVLPAININENVINGQDYEVMMQIDCQVMDTRILHIKSSSVPPYLRDQQRNQTSTFFGSPPAATEATHVVSTIPESLQ