Sequence details NCBI ID: XM_004865039.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Arhgef40
Gene Name Rho guanine nucleotide exchange factor (GEF) 40, transcript variant X3
Entrez Gene ID 101726117

Database interlinks

Part of NW_004624825.1 (Scaffold)

For more information consult the page for NW_004624825.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ARHGEF40 ENSCPOG00000012862 (Guinea pig)

Gene Details

Rho guanine nucleotide exchange factor (GEF) 40

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011576, Guinea pig)

Protein Percentage 92.03%
CDS Percentage 92.18%
Ka/Ks Ratio 0.22068 (Ka = 0.0422, Ks = 0.1914)

ARHGEF40 ENSG00000165801 (Human)

Gene Details

Rho guanine nucleotide exchange factor (GEF) 40

External Links

Gene Match (Ensembl Protein ID: ENSP00000298694, Human)

Protein Percentage 87.92%
CDS Percentage 88.56%
Ka/Ks Ratio 0.24375 (Ka = 0.0697, Ks = 0.2858)

Arhgef40 ENSMUSG00000004562 (Mouse)

Gene Details

Rho guanine nucleotide exchange factor (GEF) 40

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000091331, Mouse)

Protein Percentage 85.87%
CDS Percentage 83.99%
Ka/Ks Ratio 0.16937 (Ka = 0.0855, Ks = 0.505)

Arhgef40 ENSRNOG00000011129 (Rat)

Gene Details

Rho guanine nucleotide exchange factor (GEF) 40 (Arhgef40), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000037837, Rat)

Protein Percentage 85.58%
CDS Percentage 83.71%
Ka/Ks Ratio 0.17255 (Ka = 0.0878, Ks = 0.5091)

Genome Location

Sequence Coding sequence

Length: 4557 bp    Location: 7067148..7084671   Strand: +
Raw sequence   
>XM_004865039.1
ATGGAGCCTGAGCCAGTGGAGGACTGTGTGCAGAGCACACTCGCCGCTTTGTACCCACCCTTTGAAGCCACAGCCCCCACCCTGTTGGGCCAGGTATTCCAAGTGGTGGAGAGGACTTATCGGGAGGATGCGCTGAGGTACACGCTGGACTTCCTGGTACCAGCCAAGCACCTGCTTGCCAAGGTCCAGCAGGAAGCCTGTGCCCAGTACAGCGGATTCCTCTTCTTCCATGAGGGCTGGCCCCTCTGCCTGCATGAGCAGGTTGTGGTGCAACTAGCAGCCCTTCCCTGGCAGCTGCTTCGCCCCGGAGACTTTTACCTGCAGGTGGTGCCCTCAGCAGCCCAAGCACCCCACCTGGCACTCAAGTGTCTGGCCCCAGGGGGTGGGCGGGTACAGGAGCTGCCTGTGCCCAATGAGGCCTGTGCCTACCTGTTTACACCTGAGTGGCTGCAAGGCATCAACAAGGACCGGCCTACGGGTCGCCTCAGCACCTGCCTGCTGTCTGCGCCCTCTGGGATTCACCGGCTGCCCTGGGCCGAACTCATCTGCCCACGATTTGTACACAAAGGAGGCCTCATGGTTGGACATCGGCCAGGCACACTGCCTCCTGAACTGCCATCTGTACCCCCAGGGCTTCCCAGCCCTTCACTCCCTCAGGAGGTGCTGGGCACTCGGAGTCCTGGGGATGGGCACAATGCTCCAGCTGAAGGACCAGAGGGTGAGTACGTGGAGCTTTTGGAGGTGACACTGCCTGTAAGGGGAAGTCCCACAGATGCTGAGGGCTCTTCGGGCCTCTCCAGGACCCGGACAGTACCTACCCGCAAGAGTGCTGGAGGGAAGGGCCGGCACCGGAGGCACCGGGCATGGATGCACCAGAAGGGTCTGGGGGTTCAGGCTCAGGACCAGGATGGATCACGCCCACCCGGTGAGGGGAGCAGCACTGGAGCCTCCCCTAGGTCTCCGCCAGGAGCTGAAGCTGTCCCAGGGGCAGCAGACCTGGAGGTATCTGAACCCCCAACAGAGGCCTTGGGGGAATCCCCTGAATCCTGCTTCCCAAGATCAGGGGACCCTGGAGCAGGTCAGGGGGCTGAAGGACCACCTGGTACCCCTCGGAGAACAGGCAAAGGAAACAGGAGAAAGAAGCGAGCCACAGGCAGAGGGGCTCTGAGCCGAGGAGGGGACAGTGCCCCACTCAGCCCTGGGGACAAGGAAGAGACCGACTACCAGGAAGCCCTTGTCAGTTTGCCCTCACCAAACGAAAACAAGCTTCCAGAATGCAGCCTGGTTAAGGGTGAAAACAAAGACCCTGGAAAGTCAGAATCAGAGCCCAAAGAGGAGATCACGCCCCCAGATGAAAAAGAGTCTTTGCCCCCAGAAGATAGTGGTTCTGCAGAAGAGAGGACCAAAGAAAGAGAGCAAGAGGGATCGAGCCTGGTTTCGGTGGCAGGGTCTGCAGACCCAGAGGAGCTCCTGTCCGACTCCCCAACACAGCCTCTGGAGCCTGTGCAGGAAGTAAAAGTGGACAGCATTCCACAAGAGGCCCCTCCAGTCTCCATCTCTGATGACCCTGACATAGCCTGGGATTTGATGGCATCTGGATTCCTTGTCCTGACTGGAGGGGTGGACCAGAGTGGGCGAGCTCTGCTGACCATTACCCCACCGTGTCCTCCTGAGGAGCCCGCACCCTCCCGAGACATGCTGAGCACTGCTCTTCATTACCTCCACTCACTTCTCAGGCCTGATCTCCAGTTATTGGGACTGTCTGTTTTGCTGGACCTTCGCAAAGCACCCCCACTGCCTCCAGTGCTCATTCCTGCTCTGAGTCAACTGCAGGACTCAGGAGACCCTCCCCTTATTCAGCGGCTGCTGATTCTCACTAATGGTGACCCTCCCACTGAACTCTGTGGATTTCAGGGTGCTGAGTGGCTGTCAGAGAGTGATCTGAAAAGAGTGGCCAAGCCAGAGGAGCTGCAGTGGGACCTAGGAGGTCACAGAGACTCCTCTCCCAGCCACTGGGTAGAGGTACATAAGGAAGTAGCAAGGCTATGCAGCCTGTGCCAAGGTGTGCTGGGCTCCATACGGCAGGCCATTGAAGAGCTGGAGAGAGCAGCAGCGTCAGAGGGAGAGGAGGTGGTGGGAATGCCTGACCCTCTGCAGAAGGTGCTGGCTGATCACCGACTGACGGCATTGCAGAGAGATGGGGGAGCCATCCTGATGAGGCTGCGCTCCACCCACAGCAGCAAGTTGGAGGGCTCGGACCCAGCTACCCTCTATCAGGAGGTGGATGAGGCCATTCACCAGCTTGTGCGCCTCTCCAACCTGCAAGTGCAACGGCAGGAGCAGCGGCAGCGCCTGCACCGACTCCAGCAGGTGCTGCAGTGGCTCTTGGGCCCAGGAGACGAGCAGCTGGCAAGTTTCGCTCTGCCTGGGGACTCCCTGCCTGCTCTACAGGAGACAGAGCTGCGATTCCGGGCTTTCAGCACTGAGGTTCAGGAGCGCCTGGCCCAGGCCCGGGAGGCCTTGGCTCTGCAGGAGGACCCTGCCTCCCAAAAGGTTTTGGATGCCTTTGAGCAGCGGCTGGAGCAGGTGGAGAGTGGCCTCCATCGGGCCCTGCGGCTTCAGCGCTTCTTCCAGCAGGCACATGAATGGGTAGATGAGGGCTCTGCTCGGCTGGCAGGAGCTGGGCCTGGTCGTGAGGCCCTGTTGGCAGCCCTTGCCCTGCGGCGGGCCCCAGAGCCCAGTGCCGGCACCTTCCAGGAGATGCGGGCCCTGGCCATGGACCTGGGCAGCCCAGCAGCCCTGCGAGAGTGGGGTCACTGCCGCGCCCGTTGCCAAGAACTGGAGAGGAGGATTCAGCAGCAGATGGGAGAGGAAGCCAGTCCGCGGGGCCATCGGCGGCGACGGGCAGACAGTGCCAGCAGTGCGGGGCCCCAGCGGGGCTCCCATAGCCCCTCACCCAGCCTCAGTTCCCTGCTGCTTCCTAGCAGCCCTGGACCACGGGCTGCTCCGTCCCATTGCTCCCTGGCCCCATGTGGGGAGGACTATGAGGAGGAGTCCCCGGAGCTGGCTCCAGAAGCAGACGGCAAACCCCCAAGGGCTGTGCTCATCCGAGGCCTGGAGGTCACCAGCACTGAGGTGGTAGACAGGACGTGCTCACCAAGGGAACATGTGCTGCTGGGCCGGGCTGGGGGGCCGGACGGTCCCTGGGGAATAAGCACCCCCCGGATGGAGCGCAAGCGGAGTATCAGTGCCCAGCAGCGTCTGCTGTCTGAACTGATTGCCTGTGAGCAGGAGTATGTGAGCAGCCTGAGTGAGCCAGTGCCACCCCCTGGGCCTGAGCTGACTCTTGAACTGCGGGGCACCTGGGCTGCTGTCCTGAGCACCCGGGAAAGGCTTCGAAGCTTCCACCGGACACACTTTCTGCGGGAGCTGCAGGGCTGTGCCACCCACCCTCTGCGCATTGGGGCCTGCTTCCTCCGCCACGGGGACCAGTTTGGCCTCTATGCTCAGTATGTGAAGCACCGACACAAGCTGGAGAGTGGTCTGGCCGCCCTCAGCCCCCCAGCCAAGGGCTCCACAGAGGGTAGCCCTTACCTGCCCCTGGCCCTGCACCAGCCCCTAGAACAACTGGCTCGGTATGGGCGCCTCCTAGAGGAGCTTCTGAGAGAAGCTGGGCCTGAGCTGAGTTCCGAACGCCAGGCCCTCGGGGCTGCTGTGCAGCTGCTCCGGGAACAAGAGGCCCGTGGCAGAGACCTGCTGGCTGTGGAGGCAGTGCGAGGCTGTGAGATAGATCTGAAGGAGCAGGGACAGCTCTTGCATCGGGATCCCTTCACTGTCATCTGTGGCCGGAAGAAGTGCCTTCGCCATGTCTTTCTCTTTGAACACCTCCTCTTGTTCAGCAAGCTCAAGGGCTCTGAGTGGGGGGCTGAGAGCTTTGTTCACAAGCAGGCTTTTAAGACTGCTGACATGGGGCTGACAGAAAACATTGGGGACAGCGGGCTCTGCTTTGAACTGTGGTTCCGCCGGCGGCGTGCACGAGAGGCATATACTTTGCAGGCAACCTCAGCAGAGATCAAACTCAAGTGGACAAGTTCCATTGCCCAGCTGCTGTGGAGACAGGCAGCCCACAACAAGGAGCTCCGAGTGCAGCAGATGGTGTCTATGGGCATTGGGAATAAACCCTTCCTGGACATCAAAGCCCTTGGGGAGCGGACACTGAGTGCCCTGCTTACCGGGAGAGCTGCCCGCACCCGGGCCTCCGTGGCCGTGTCATCCTTTGAGCATGCCGGCCCTTCCCTTCCCGGCCTCTCACCGGGAGCCTGCTCCCTGCCTGCCCGCGTCGAGGAGGAGGCCTGGGATCTGGACGTCAAGCAAATTTCCCTGGCCCCAGAAACACTTGACTCTTCTGGAGATGTGTCCCCAGGACCAAGAAACAGCCCCAGCGTGCAACCCCCCCACCCTGGGAGCAGCACTCCCACCCTGGCCAGTGGCGGGATCTTAGGGCTATCCTGGCAGAGTCACGCCCGAGCCCTGAGTGACCCCACCACGCCTCTGTGA

Related Sequences

XP_004865096.1 Protein

Arhgef40 PREDICTED: rho guanine nucleotide exchange factor 40 isoform X3 [Heterocephalus glaber]

Length: 1518 aa      View alignments
>XP_004865096.1
MEPEPVEDCVQSTLAALYPPFEATAPTLLGQVFQVVERTYREDALRYTLDFLVPAKHLLAKVQQEACAQYSGFLFFHEGWPLCLHEQVVVQLAALPWQLLRPGDFYLQVVPSAAQAPHLALKCLAPGGGRVQELPVPNEACAYLFTPEWLQGINKDRPTGRLSTCLLSAPSGIHRLPWAELICPRFVHKGGLMVGHRPGTLPPELPSVPPGLPSPSLPQEVLGTRSPGDGHNAPAEGPEGEYVELLEVTLPVRGSPTDAEGSSGLSRTRTVPTRKSAGGKGRHRRHRAWMHQKGLGVQAQDQDGSRPPGEGSSTGASPRSPPGAEAVPGAADLEVSEPPTEALGESPESCFPRSGDPGAGQGAEGPPGTPRRTGKGNRRKKRATGRGALSRGGDSAPLSPGDKEETDYQEALVSLPSPNENKLPECSLVKGENKDPGKSESEPKEEITPPDEKESLPPEDSGSAEERTKEREQEGSSLVSVAGSADPEELLSDSPTQPLEPVQEVKVDSIPQEAPPVSISDDPDIAWDLMASGFLVLTGGVDQSGRALLTITPPCPPEEPAPSRDMLSTALHYLHSLLRPDLQLLGLSVLLDLRKAPPLPPVLIPALSQLQDSGDPPLIQRLLILTNGDPPTELCGFQGAEWLSESDLKRVAKPEELQWDLGGHRDSSPSHWVEVHKEVARLCSLCQGVLGSIRQAIEELERAAASEGEEVVGMPDPLQKVLADHRLTALQRDGGAILMRLRSTHSSKLEGSDPATLYQEVDEAIHQLVRLSNLQVQRQEQRQRLHRLQQVLQWLLGPGDEQLASFALPGDSLPALQETELRFRAFSTEVQERLAQAREALALQEDPASQKVLDAFEQRLEQVESGLHRALRLQRFFQQAHEWVDEGSARLAGAGPGREALLAALALRRAPEPSAGTFQEMRALAMDLGSPAALREWGHCRARCQELERRIQQQMGEEASPRGHRRRRADSASSAGPQRGSHSPSPSLSSLLLPSSPGPRAAPSHCSLAPCGEDYEEESPELAPEADGKPPRAVLIRGLEVTSTEVVDRTCSPREHVLLGRAGGPDGPWGISTPRMERKRSISAQQRLLSELIACEQEYVSSLSEPVPPPGPELTLELRGTWAAVLSTRERLRSFHRTHFLRELQGCATHPLRIGACFLRHGDQFGLYAQYVKHRHKLESGLAALSPPAKGSTEGSPYLPLALHQPLEQLARYGRLLEELLREAGPELSSERQALGAAVQLLREQEARGRDLLAVEAVRGCEIDLKEQGQLLHRDPFTVICGRKKCLRHVFLFEHLLLFSKLKGSEWGAESFVHKQAFKTADMGLTENIGDSGLCFELWFRRRRAREAYTLQATSAEIKLKWTSSIAQLLWRQAAHNKELRVQQMVSMGIGNKPFLDIKALGERTLSALLTGRAARTRASVAVSSFEHAGPSLPGLSPGACSLPARVEEEAWDLDVKQISLAPETLDSSGDVSPGPRNSPSVQPPHPGSSTPTLASGGILGLSWQSHARALSDPTTPL