Sequence details NCBI ID: XM_004864910.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Srl
Gene Name sarcalumenin
Entrez Gene ID 101701696

Database interlinks

Part of NW_004624824.1 (Scaffold)

For more information consult the page for NW_004624824.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SRL ENSCPOG00000012643 (Guinea pig)

Gene Details

sarcalumenin

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011374, Guinea pig)

Protein Percentage 94.34%
CDS Percentage 93.22%
Ka/Ks Ratio 0.16058 (Ka = 0.0309, Ks = 0.1923)

SRL ENSG00000185739 (Human)

Gene Details

sarcalumenin

External Links

Gene Match (Ensembl Protein ID: ENSP00000382518, Human)

Protein Percentage 97.25%
CDS Percentage 91.12%
Ka/Ks Ratio 0.03007 (Ka = 0.0127, Ks = 0.4213)

Srl ENSMUSG00000022519 (Mouse)

Gene Details

sarcalumenin

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000023161, Mouse)

Protein Percentage 80.09%
CDS Percentage 83.02%
Ka/Ks Ratio 0.27227 (Ka = 0.1253, Ks = 0.4601)

Srl ENSRNOG00000005269 (Rat)

Gene Details

5-hydroxytryptamine receptor 2B

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000039064, Rat)

Protein Percentage 80.88%
CDS Percentage 82.49%
Ka/Ks Ratio 0.24872 (Ka = 0.1256, Ks = 0.505)

Genome Location

Sequence Coding sequence

Length: 2757 bp    Location: 2021159..1979540   Strand: -
Raw sequence   
>XM_004864910.1
ATGAGGGCGCTGCTCCTGCTCTGCTGCTTCCTGGCCTCGCTCCTGCTCTCGGGACAAGCAGAACTGCAAGTCCCTGCTTCGGGTGGCACAGAAGATGTTGGCAATTTGTTGGAGAATCATTTCTCTGCTGGAGACGCAAGTCTAGAGGAGAAAGAAAGGGTGCTATATGCAGATGCGGCCCTTCAAGACAAGAATCTGCTCCTTCACTACCCAGACAGCAGGGAGGCTGAGAGCTCAGAGCAGACCACCGCCGGGGTCCCTCCCACTGCCACCAGCCCAGACTCTGAGCCTGAAGCCACCCTCTCCAATGCCTCAGCTGCAGAAGCAGCTCCACCTGGGGATGTTATGGGGCCTGGGAAGGAAGAGGAGGGCCCATCAGGGGCAGGCATCTTTCCTCTGGGAGAGGATGAGGGGCCTGTGGAAGAGGACAGGCTAAAGCTCATTTCAGGAGGAGGGGAGGAGGCAGCTGGGCTGGGGCTCCCTACAGCAGGAGCTGTCAGTGGGAAGACAGAAGGACAGGTGGGGAGTGGTGAGGTTCCCCAAGAAGATGAGGAAGTCCTAAGAGACAGTCCCGTGCAGGAAGCAGCAGCAGGAACAGAAGAGCCTGAAGCCATTGGGACCTTTCCTAGCTTAGAGGGTGAAGAGTTTCACACCCCAGAGGCAGAAGGCAAGAGCAGCCCTGGGCCTGATCACCAGCCTACAGAGCTAGATGGTGATGCCACATCTGCAGAAGAGTCAGAGGCTGATATGGGGACAGAAGGTGGGGAGGGGGCTGAAGACCAGTCCCAACCCCAGCCCCAGGCCCATGCACTGGAAACAGAAGATGAGGGCAACCCAGGGCCTGATCACCAGCCCACAGAGCTAGATGGAGCCCCTGATGCTGCAATTGTGGGAGTAGAGTTGGAACCTGGTGTGGACACAGAAGCCAGGGAAGGGGCTGAGGACCAGGGGGAGCCAAGCCCCATCCAAGAGGCTGGGCCAGCCACGGAGGTCAGTGAAGAGTCTGGGGGTGTTCAGAGCTCCAGGCCTGGGGAGACTGATGAGGACCGCTCCCCTAAGGCTCAGGTGCCAGGGATGCCTGTGGAGGCCTCTGATGAGGCCTCCTCTGAAGAAGCTGATGGTGAAGAAGGTAGAAGTGAGGAGGAAGGAGTAGTTCCATCCCAAGAAGAGTCTGGAGAAGACAGTGGCGAGGGGGCTAGCTCAGAAGAAGAGGGGGAATCTGAGGAGGCTGAGCTCCAAGAAGCAACAGAAACCACAGATCACGAGGAGGAAGGAGCTCAGCTCGGCACAGAGGAACTGAATATAGGGTCTGAGGGTGGCAAGACGCAAGATCCTGAGGCAGAGGAGCCTGAAGAGGGACGTCAGGGGAGGGGGAATCCCATAATTGCTGCACAGGAAGAGACAGAGGATGTGAGTGAAGAAGCCCCAATGAGGGACCGCTCCCACATCGAGAAGACCTTGATGCTAAATGAGGACAAGCCAGCTGATGATTATTCAGCAGTGTTGCAGCGGCTTCGAAAGATCTACCATACATCCATCAAGCCCCTGGAGCAGTCTTACAAATACAATGAGCTTCGGCAGCATGAGATCACAGATGGGGAAATTACTTCTAAGCCAATGGTGTTGTTCCTTGGACCGTGGAGTGTTGGTAAATCCACCATGATAAACTACCTCCTTGGGTTGGAAAACACTCGCTACCAGCTCTATACAGGTGCTGAGCCCACCACCTCTGAGTTCACAGTCCTCATGCACGGGCCCAAACTGAAAACGATTGAGGGTATTGTCATGGCTGCTGACAGTGCCAGGTCCTTTTCACCCCTGGAGAAGTTTGGCCAGAATTTCCTAGAGAAGCTCATTGGCATTGAGGTTCCCCACAAGCTTCTGGAGCGGGTCACTTTTGTGGATACACCTGGCATCATTGAGAACCGCAAGCAACAAGAAAGAGGCTACCCCTTCAATGATGTGTGCCAATGGTTCATCGACAGAGCTGATCTCATTTTTGTTGTCTTTGACCCTACCAAGCTGGATGTGGGTCTGGAGCTGGAGATGCTCTTCCGCCAGCTGAAGGGACGTGAGTCCCAGATAAGGATCATCCTGAACAAAGCTGACAACCTGGCCACACAAATGCTAATGCGTGTGTATGGAGCCCTCTTCTGGAGCTTGGCTCCTCTCATCAATGTCACAGAACCCCCAAGGGTTTACGTTAGTTCCTTCTGGCCACAAGATTATAAACCCGACACCCACCGGGAACTGTTCCTCAAAGAAGAGATCTCCCTCCTGGAAGACCTGAACCAGGTGATTGAGAACAGGTTGGAGAATAAGATTGCCTTCATCCGCCAGCATGCCATCCGGGTCCGCATTCATGCCCTGTTGGTTGACCGCTATCTGCAGACTTACAAAGACAAAATGACCTTCTTCAGTGATGGTGAACTGGTCTTTAAAGACATTGTGGAAGATCCTGATAAATTCTACATCTTCAAGACTATTCTGGCAAAGACCAATGTCAGCAAGTTTGACCTTCCCAACCGTGAGGCTTATAAGGACTTCTTTGGCATCAACCCCATTTCCAGTTTCAAACTCCTCTCTCAGCAGTGCTCCTACATGGGAGGATGCTTTCTGGAGAAGATTGAGCGGGCCATCACCCAAGAGCTCCCCGGCCTCCTGGGTAGCCTTGGGCTTGGGAAGAATCCAGGTGCTCTCAACTGTGACAAAACAGGGTGTGGTGAAACCCCAAAGAATCGCTACAGGAAGCACTAG

Related Sequences

XP_004864967.1 Protein

Srl PREDICTED: sarcalumenin [Heterocephalus glaber]

Length: 918 aa      View alignments
>XP_004864967.1
MRALLLLCCFLASLLLSGQAELQVPASGGTEDVGNLLENHFSAGDASLEEKERVLYADAALQDKNLLLHYPDSREAESSEQTTAGVPPTATSPDSEPEATLSNASAAEAAPPGDVMGPGKEEEGPSGAGIFPLGEDEGPVEEDRLKLISGGGEEAAGLGLPTAGAVSGKTEGQVGSGEVPQEDEEVLRDSPVQEAAAGTEEPEAIGTFPSLEGEEFHTPEAEGKSSPGPDHQPTELDGDATSAEESEADMGTEGGEGAEDQSQPQPQAHALETEDEGNPGPDHQPTELDGAPDAAIVGVELEPGVDTEAREGAEDQGEPSPIQEAGPATEVSEESGGVQSSRPGETDEDRSPKAQVPGMPVEASDEASSEEADGEEGRSEEEGVVPSQEESGEDSGEGASSEEEGESEEAELQEATETTDHEEEGAQLGTEELNIGSEGGKTQDPEAEEPEEGRQGRGNPIIAAQEETEDVSEEAPMRDRSHIEKTLMLNEDKPADDYSAVLQRLRKIYHTSIKPLEQSYKYNELRQHEITDGEITSKPMVLFLGPWSVGKSTMINYLLGLENTRYQLYTGAEPTTSEFTVLMHGPKLKTIEGIVMAADSARSFSPLEKFGQNFLEKLIGIEVPHKLLERVTFVDTPGIIENRKQQERGYPFNDVCQWFIDRADLIFVVFDPTKLDVGLELEMLFRQLKGRESQIRIILNKADNLATQMLMRVYGALFWSLAPLINVTEPPRVYVSSFWPQDYKPDTHRELFLKEEISLLEDLNQVIENRLENKIAFIRQHAIRVRIHALLVDRYLQTYKDKMTFFSDGELVFKDIVEDPDKFYIFKTILAKTNVSKFDLPNREAYKDFFGINPISSFKLLSQQCSYMGGCFLEKIERAITQELPGLLGSLGLGKNPGALNCDKTGCGETPKNRYRKH