Details from NCBI annotation

Gene Symbol Nubp1
Gene Name nucleotide binding protein 1, transcript variant X3
Entrez Gene ID 101718088

Database interlinks

Part of NW_004624824.1 (Scaffold)

For more information consult the page for NW_004624824.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

NUBP1 ENSCPOG00000022598 (Guinea pig)

Gene Details

nucleotide binding protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000016725, Guinea pig)

Protein Percentage 95.47%
CDS Percentage 93.1%
Ka/Ks Ratio 0.10149 (Ka = 0.0233, Ks = 0.23)

NUBP1 ENSG00000103274 (Human)

Gene Details

nucleotide binding protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000283027, Human)

Protein Percentage 92.5%
CDS Percentage 89.06%
Ka/Ks Ratio 0.08892 (Ka = 0.0384, Ks = 0.4317)

Nubp1 ENSMUSG00000022503 (Mouse)

Gene Details

nucleotide binding protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000023146, Mouse)

Protein Percentage 89.69%
CDS Percentage 86.46%
Ka/Ks Ratio 0.1012 (Ka = 0.0552, Ks = 0.5452)

Nubp1 ENSRNOG00000002574 (Rat)

Gene Details

nucleotide binding protein 1 (Nubp1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000003479, Rat)

Protein Percentage 89.06%
CDS Percentage 87.08%
Ka/Ks Ratio 0.12471 (Ka = 0.0603, Ks = 0.4835)

Genome Location

Sequence Coding sequence

Length: 963 bp    Location: 8024575..8039657   Strand: +
>XM_004864880.1
ATGGAGGAGGTGCCTCACGACTGCCCCGGGGCCGAGAGCGCTCAGGCGGGCCGAGGGGCCTCATGTCAGGGATGCCCCAACCAACGTCTGTGCGCTTCTGGAGCCGGCGCCGCTCCGGACCCGGCCATAGAGGAAATCAAAGAGAAAATGAAGACGGTGAAACACAAAATCTTGGTGTTGTCTGGGAAAGGCGGCGTTGGGAAAAGCACTTTCAGTGCCCACCTTGCCCACGGCCTAGCAGAGGATGAAAATACACAGGTTGCCCTTCTGGACATCGATATTTGTGGGCCCTCTATTCCCAAGATCATGGGATTGGAAGGAGAGCAGGTGCACCAGAGTGGTTCGGGCTGGTCTCCAGTGTATGTGGAAGATAACCTGGGGGTGATGTCTGTGGGTTTCCTGCTCAGCAGCCCTGATGATGCTGTTATCTGGAGGGGACCAAAGAAAAACGGCATGATCAAGCAGTTCCTCCGTGACGTGGACTGGGGAGATGTGGACTACCTCCTTGTGGACACGCCACCCGGCACATCCGATGAGCACCTCTCAGTTGTCCAGTACCTGGCAGCAGCACACATTGATGGGGCAGTGGTCATCACCACCCCTCAGGAGATATCACTCCAGGATGTCCGGAAAGAAATCAACTTTTGCCGAAAAGTGAAGCTGCCCATCATCGGGGTGGTGGAGAACATGAGTGGCTTTGTCTGCCCCAAGTGTAAGAAAGAATCTCAGATCTTCCCCCCAACAAGTGGAGGTGCAGAGGCCATGTGCCGAGACCTGAAGATCCCTCTGCTTGGCAAAGTGCCTCTGGACCCATGCATAGGTAAGAGCTGTGACAAAGGCCAATCTTTCTTCATTGAAGCCCCAGATTCACCAGCCACATTAGCCTACAGAAGTATAATTCAAAGAATCCAAGAGTTTTGTAGTCCAAATCAGTCAGAGGAAGAGAACCTCATCAGTTCCTGA

Related Sequences

XP_004864937.1 Protein

Nubp1 PREDICTED: cytosolic Fe-S cluster assembly factor NUBP1 isoform X3 [Heterocephalus glaber]

Length: 320 aa      View alignments
>XP_004864937.1
MEEVPHDCPGAESAQAGRGASCQGCPNQRLCASGAGAAPDPAIEEIKEKMKTVKHKILVLSGKGGVGKSTFSAHLAHGLAEDENTQVALLDIDICGPSIPKIMGLEGEQVHQSGSGWSPVYVEDNLGVMSVGFLLSSPDDAVIWRGPKKNGMIKQFLRDVDWGDVDYLLVDTPPGTSDEHLSVVQYLAAAHIDGAVVITTPQEISLQDVRKEINFCRKVKLPIIGVVENMSGFVCPKCKKESQIFPPTSGGAEAMCRDLKIPLLGKVPLDPCIGKSCDKGQSFFIEAPDSPATLAYRSIIQRIQEFCSPNQSEEENLISS