Details from NCBI annotation

Gene Symbol Abat
Gene Name 4-aminobutyrate aminotransferase, transcript variant X3
Entrez Gene ID 101712584

Database interlinks

Part of NW_004624824.1 (Scaffold)

For more information consult the page for NW_004624824.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ABAT ENSCPOG00000000232 (Guinea pig)

Gene Details

4-aminobutyrate aminotransferase

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000205, Guinea pig)

Protein Percentage 94.6%
CDS Percentage 92.6%
Ka/Ks Ratio 0.09467 (Ka = 0.0275, Ks = 0.2909)

ABAT ENSG00000183044 (Human)

Gene Details

4-aminobutyrate aminotransferase

External Links

Gene Match (Ensembl Protein ID: ENSP00000379845, Human)

Protein Percentage 92.4%
CDS Percentage 89.47%
Ka/Ks Ratio 0.08636 (Ka = 0.0392, Ks = 0.4533)

Abat ENSMUSG00000057880 (Mouse)

Gene Details

4-aminobutyrate aminotransferase

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000063548, Mouse)

Protein Percentage 89.8%
CDS Percentage 85.73%
Ka/Ks Ratio 0.08072 (Ka = 0.0554, Ks = 0.6861)

Abat ENSRNOG00000002636 (Rat)

Gene Details

4-aminobutyrate aminotransferase (Abat), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000003633, Rat)

Protein Percentage 90.0%
CDS Percentage 86.2%
Ka/Ks Ratio 0.0771 (Ka = 0.0517, Ks = 0.6709)

Genome Location

Sequence Coding sequence

Length: 1503 bp    Location: 6112659..6202936   Strand: +
>XM_004864866.1
ATGGCCTTCATGTTGCTCCCCCGGCGTCTGGCCTGTAGCTCTTGGCACAGCCACCTCCTGCTTGCATCTGGATCCCGACACATCGGTCAAGCTGCAGCCAAAATCGATCTTGAGTTTGACTATGATGGGCCCCTGATGAAGACAGAAGTCCCAGGTCCTAGATCTCTGGAATTAATGAAACAGTTGAATATGATTCAGAATGCAGAGGCCGTACATTTTTTCTGCAACTATGAAGAGAGCCGAGGCAACTACCTGGTCGACGTGGATGGTAACCGCATGCTGGATCTTTACTCCCAGATCGCCTCTGTCCCCATTGGTTACAGCCATCCTGCCCTGGCAAAACTGGTCCAGCAGCCTCAGAATGTGAGCGCCTTCATCAACAGACCTGCCCTGGGCATCCTGCCCCCAGAGAACTTCGTGAACAAGCTCAGGGAGTCCTTGCTCTCGGTGGCTCCGAAGGGGATGTCCCAGCTTGTCACCATGGCCTGTGGCTCCTGCTCCAATGAAAATGCCTTCAAGACCATCTTCATGTGGTACCGGAGCAAAGAAAGAGGGCAAAGAGGGTTCTCAAAAGAGGAGCTGGAGTCGTGCATGATTAACCAGGCCCCCGGGTGCCCTGACTACAGCATCCTCTCCTTTATGGGCGCTTTCCACGGGAGGACCTTGGGTTGCTTAGCGACCACGCACTCCAAAGCAATTCACAAGATCGACATCCCTTCCTTCGACTGGCCCATTGCGCCTTTCCCACGGCTGAAGTACCCTCTGGAGGAGTTTGAGAAGGACAACCAGCAGGAGGAGGCCCGCTGCCTGGAGGAGGTGGAGGATCTGATTGTTAAATACCGGAAAAAGAAGAAGACTGTGGCCGGGATCATCGTGGAGCCCATCCAGTCTGAGGGCGGAGACAACCACGCATCGGATGACTTCTTCCGGAAGCTGAGAGACATCGCTAGGAAGCATGGCTGTGCCTTCCTGGTGGATGAAGTCCAGACAGGAGGGGGCTGCACCGGCAAATTCTGGGCCCACGAGCACTGGGGCTTGGATGACCCAGCAGACCTCATGACCTTCAGCAAGAAGATGATGGTTGGGGGCTTCTTCCACAAGGAGGAGTTCCGGCCCAACGCTCCTTACCGGATCTTCAACACCTGGCTGGGGGACCCATCCAAGAACTTGCTGCTGGCTGAGGTCATCAACATTATCAAACGTGAGGACCTGATGAACAACGCAGCCCATGCAGGGAAGGTCCTACTCACAGGATTGCTGGACCTCCAGGCCCGGTACCCTCAGCTCATCAGCAGGGTAAGAGGACGAGGCACCTTTTGCTCCTTCGACACTCCCAATGACTCCATACGGAATAAACTCATTTTAATCACCAGAAACAAAGGTGTGGTGTTGGGAGGCTGTGGTGACAAATCCATCCGTTTCCGTCCCATGCTGGTCTTCAGGGAACACCACGCTCACCTGTTCCTCAATATCTTCAGTGACATCTTAGCAGACTTCAAGTAG

Related Sequences

XP_004864923.1 Protein

Abat PREDICTED: 4-aminobutyrate aminotransferase, mitochondrial isoform X3 [Heterocephalus glaber]

Length: 500 aa      View alignments
>XP_004864923.1
MAFMLLPRRLACSSWHSHLLLASGSRHIGQAAAKIDLEFDYDGPLMKTEVPGPRSLELMKQLNMIQNAEAVHFFCNYEESRGNYLVDVDGNRMLDLYSQIASVPIGYSHPALAKLVQQPQNVSAFINRPALGILPPENFVNKLRESLLSVAPKGMSQLVTMACGSCSNENAFKTIFMWYRSKERGQRGFSKEELESCMINQAPGCPDYSILSFMGAFHGRTLGCLATTHSKAIHKIDIPSFDWPIAPFPRLKYPLEEFEKDNQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDIARKHGCAFLVDEVQTGGGCTGKFWAHEHWGLDDPADLMTFSKKMMVGGFFHKEEFRPNAPYRIFNTWLGDPSKNLLLAEVINIIKREDLMNNAAHAGKVLLTGLLDLQARYPQLISRVRGRGTFCSFDTPNDSIRNKLILITRNKGVVLGGCGDKSIRFRPMLVFREHHAHLFLNIFSDILADFK