Details from NCBI annotation

Gene Symbol Rbfox1
Gene Name RNA binding protein, fox-1 homolog (C. elegans) 1, transcript variant X12
Entrez Gene ID 101707083

Database interlinks

Part of NW_004624824.1 (Scaffold)

For more information consult the page for NW_004624824.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RBFOX1 ENSCPOG00000011314 (Guinea pig)

Gene Details

RNA binding protein, fox-1 homolog (C. elegans) 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010173, Guinea pig)

Protein Percentage 99.28%
CDS Percentage 97.05%
Ka/Ks Ratio 0.04023 (Ka = 0.0037, Ks = 0.0908)

RBFOX1 ENSG00000078328 (Human)

Gene Details

RNA binding protein, fox-1 homolog (C. elegans) 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000309117, Human)

Protein Percentage 97.61%
CDS Percentage 94.82%
Ka/Ks Ratio 0.0671 (Ka = 0.0116, Ks = 0.1731)

Rbfox1 ENSMUSG00000008658 (Mouse)

Gene Details

RNA binding protein, fox-1 homolog (C. elegans) 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000049970, Mouse)

Protein Percentage 96.88%
CDS Percentage 90.81%
Ka/Ks Ratio 0.04528 (Ka = 0.0165, Ks = 0.3635)

Rbfox1 ENSRNOG00000002827 (Rat)

Gene Details

RNA binding protein, fox-1 homolog (C. elegans) 1 (Rbfox1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000059781, Rat)

Protein Percentage 95.19%
CDS Percentage 89.42%
Ka/Ks Ratio 0.07217 (Ka = 0.0296, Ks = 0.4097)

Genome Location

Sequence Coding sequence

Length: 1257 bp    Location: 4794741..5111956   Strand: +
>XM_004864857.1
ATGCTGGCGTCCCAAGGAGTCCTCCTGCAGTCCTATGGCGTGCCTATGATTGTTCCAGCAGCCCCTTTCTTCCCTGGGCTGATTCAGGGTAATCAGGAAGCAGCGGCCGCCCCTGACACGATGGCTCAACCTTACGCTTCGGCCCAGTTTGCTCCGCCTCAGAACGGCATCCCCGCGGAATACACGGCCCCTCACCCCCACCCCGCGCCAGAGTACACGGGCCAGACCACTGTCCCTGAGCACACGTTAAACCTGTACCCTCCCGCCCAGTCGCACTCCGAGCAGAGCGCCGCGGACAACAGCGCGCAGACCGTCTCTGGTACCGCCACACAGACAGATGACGCAGCACCAACGGATGGCCAGCCCCAGACACAACCTTCTGAAAACACGGAAAACAAGTCTCAGCCCAAGAGGCTCCATGTCTCCAACATCCCCTTCCGGTTCCGGGATCCCGACCTCCGACAAATGTTTGGTCAATTTGGTAAAATCTTAGATGTTGAAATTATTTTTAATGAGCGAGGCTCAAAGGGATTTGGTTTCGTAACTTTCGAAAATAGTGCCGATGCGGACAGGGCGAGGGAGAAATTACACGGCACCGTGGTAGAGGGCCGTAAAATCGAGGTAAATAATGCCACGGCACGTGTAATGACAAATAAAAAGACCGTCAACCCCTATACAAATGGCTGGAAATTGAACCCGGTTGTGGGTGCAGTATACAGTCCTGAATTCTATGCAGGCACGGTGCTGTTGTGCCAGGCAAACCAGGAGGGATCTTCCATGTACACTGCCCCCAGTTCACTTGTATATACTTCCGCAATGCCCGGCTTCCCATATCCAGCTGCCACTGCAGCGGCCGCCTACCGAGGGGCGCACCTGCGAGGCCGCGGCCGCGCCGTGTACAACACCTTCCGGGCCGCGGCGCCCCCGCCCCCAATCCCGGCCTATGGAGGAGTAGTGTATCAAGAGCCTGTGTATGGCAATAAATTGCTGCAGGGTGGTTACGCTGCATACCGCTACGCCCAGCCTACCCCTGCCACTGCTGCCGCCTACAGTGACAGTTACGGACGAGTTTATGCTGCCGACCCCTACCACCACACACTTGCTCCAGCCCCCACCTACGGCGTTGGTGCCATGAATGCTTTTGCACCCTTGACTGATGCCAAGACTAGGAGCCATGCTGATGATGTGGGTCTCGTTCTTTCTTCATTGCAGGCTAGTATATACCGAGGGGGATACAACCGTTTTGCTCCATACTAA

Related Sequences

XP_004864914.1 Protein

Rbfox1 PREDICTED: RNA binding protein fox-1 homolog 1 isoform X12 [Heterocephalus glaber]

Length: 418 aa      View alignments
>XP_004864914.1
MLASQGVLLQSYGVPMIVPAAPFFPGLIQGNQEAAAAPDTMAQPYASAQFAPPQNGIPAEYTAPHPHPAPEYTGQTTVPEHTLNLYPPAQSHSEQSAADNSAQTVSGTATQTDDAAPTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKTVNPYTNGWKLNPVVGAVYSPEFYAGTVLLCQANQEGSSMYTAPSSLVYTSAMPGFPYPAATAAAAYRGAHLRGRGRAVYNTFRAAAPPPPIPAYGGVVYQEPVYGNKLLQGGYAAYRYAQPTPATAAAYSDSYGRVYAADPYHHTLAPAPTYGVGAMNAFAPLTDAKTRSHADDVGLVLSSLQASIYRGGYNRFAPY