Details from NCBI annotation

Gene Symbol Mgrn1
Gene Name mahogunin ring finger 1, E3 ubiquitin protein ligase, transcript variant X2
Entrez Gene ID 101726363

Database interlinks

Part of NW_004624824.1 (Scaffold)

For more information consult the page for NW_004624824.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

MGRN1 ENSCPOG00000015639 (Guinea pig)

Gene Details

mahogunin ring finger 1, E3 ubiquitin protein ligase

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000014105, Guinea pig)

Protein Percentage 95.86%
CDS Percentage 92.53%
Ka/Ks Ratio 0.0977 (Ka = 0.027, Ks = 0.2759)

MGRN1 ENSG00000102858 (Human)

Gene Details

mahogunin ring finger 1, E3 ubiquitin protein ligase

External Links

Gene Match (Ensembl Protein ID: ENSP00000262370, Human)

Protein Percentage 88.59%
CDS Percentage 86.9%
Ka/Ks Ratio 0.08979 (Ka = 0.0565, Ks = 0.6293)

Mgrn1 ENSMUSG00000022517 (Mouse)

Gene Details

mahogunin, ring finger 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000023159, Mouse)

Protein Percentage 88.32%
CDS Percentage 84.31%
Ka/Ks Ratio 0.09905 (Ka = 0.0686, Ks = 0.6925)

Mgrn1 ENSRNOG00000003234 (Rat)

Gene Details

mahogunin ring finger 1, E3 ubiquitin protein ligase (Mgrn1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000004416, Rat)

Protein Percentage 88.51%
CDS Percentage 83.55%
Ka/Ks Ratio 0.09144 (Ka = 0.0698, Ks = 0.763)

Genome Location

Sequence Coding sequence

Length: 1668 bp    Location: 2419982..2473571   Strand: +
>XM_004864810.1
ATGGGCTCCATCCTGAGCCGCCGCATCGCGGGGGTGGAGGACATCGACATCCAGGCTAACTCTGCCTATCGCTACCCTCCGAAGTCCGGAAACTACTTTGCTTCACACTTTTTCATGGGAGGTGAGAAATTTGATACCCCCCACCCTGAAGGTTACCTCTTTGGAGAGAACATGGATCTGAACTTCCTGGGCAGTCGCCCTGTCCAGTTTCCCTATGTCACTCCTGCCCCCCATGAGCCTGTGAAGACTCTGAGAAGCCTGGTGAATATCCGTAAAGACTCCCTCCGACTTGTAAGGTACAAAGATGATGCTGACAGCCCCATTGAGGGCAGCGAGAAACCCCGGGTACTCTACAGCCTGGAATTCACCTTTGACGCTGATGCCCGCGTGGCCATCACCATCTACTGCCAGGCAGTGGAGGAATTCCTGAATGGCATGGCAGTGTACAGCCCCAAGAGCCCGGCCCTGCAGTCGGAGACCATCCACTACAAGAGGGGAGTGAGCCAGCACTTCTCACTGCCTTCCTTCAAGATCGACTTCTCCGAGTGGAAAGACGACGAGTTGAACTTCGACCTGGACCGGGGCATATTTCCAGTGGTCATCCAGGCCGTGGTGGATGAGGGAGATGTTGTGGAAGTGACCGGCCATGCCCATGTGCTTTTGGCTGCCTTTGAAAAGCACGTGGACGGCAGCTTCTCTGTGAAGCCGTTAAAGCAGAAGCAGATTGTGGACCGAGTCAGCTACCTACTGCAGGAGATCTATGGCATCGAGAACAAGAACAACCAGGAGACCAAGCCCTCAGACGATGAGAACAGTGACAATAGCAGCGAGTGCGTGGTGTGTCTGTCAGACCTCCGGGACACGTTGATCCTGCCCTGCCGCCACCTGTGCCTCTGCACCTCCTGTGCTGACACGCTGCGCTATCAGGCCAATAACTGCCCCATCTGCCGGCTGCCATTCCGGGCCCTCCTGCAGATACGGGCTGTGCGGAAGAAGCCAGGGGCCGTATCTCCCATCTCCTTCAGCCCTGTCCTGGCCCAGAGCATGGACCATGATGAGCATTCTAGCTCCGACAGCATCCCACCTGGCTATGAGCCCATCTCCCTGCTTGAAGCACTCAATGGCCTGCGGGCCGTCTCCCCGGCCATCCCTTCAGCCCCCCTTTATGAGGAAATCACCTACTCGGGGGTCTCGGATGGCCTTTCCCAGGCCAGCTGTCCACTTGCTGGAATTGACCAGGTCCTAGAAACCAGCCACCAGAGCAGGCAACGGAGCAAATCTCCTGACAGCACACTGCTGTCCCCGTCATCCCCCATCCATGAGGAGGATGAGGAGAAACTCTCTGAGGACTTGGAAGTTCCTCCCCCACCAGGTGCCCCGGAGCTGGCCCTGGGGGAGAGCAGCTCGCCTGAGAGTTTCCTAACGGAAGAGGTTGATGAGCCATCGCTGAAGCAAGGGAGCCAAGTGGCATCCATCGAGGAGGTCCTGCAGGATGGCAGCCCCGAGCACCAAGCCTATGCCCAGTCAGGTCCTCCTGCTGACATCTGCCTGCCAGGATGGCCCACCTCCATGGAGTCGCCTCACAGCCTCAGCACCGCTGGGCCCCCCTGGCCTCCTCTTGGGGGCTCCAGTCCTGACCCTGGGACTTCTGACCTGACCCCACTCTGA

Related Sequences

XP_004864867.1 Protein

Mgrn1 PREDICTED: E3 ubiquitin-protein ligase MGRN1 isoform X2 [Heterocephalus glaber]

Length: 555 aa      View alignments
>XP_004864867.1
MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDLNFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPIEGSEKPRVLYSLEFTFDADARVAITIYCQAVEEFLNGMAVYSPKSPALQSETIHYKRGVSQHFSLPSFKIDFSEWKDDELNFDLDRGIFPVVIQAVVDEGDVVEVTGHAHVLLAAFEKHVDGSFSVKPLKQKQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSSECVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANNCPICRLPFRALLQIRAVRKKPGAVSPISFSPVLAQSMDHDEHSSSDSIPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGVSDGLSQASCPLAGIDQVLETSHQSRQRSKSPDSTLLSPSSPIHEEDEEKLSEDLEVPPPPGAPELALGESSSPESFLTEEVDEPSLKQGSQVASIEEVLQDGSPEHQAYAQSGPPADICLPGWPTSMESPHSLSTAGPPWPPLGGSSPDPGTSDLTPL