Sequence details NCBI ID: XM_004864762.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Trap1
Gene Name TNF receptor-associated protein 1, transcript variant X2
Entrez Gene ID 101712583

Database interlinks

Part of NW_004624824.1 (Scaffold)

For more information consult the page for NW_004624824.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TRAP1 ENSCPOG00000004977 (Guinea pig)

Gene Details

TNF receptor-associated protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004481, Guinea pig)

Protein Percentage 92.49%
CDS Percentage 91.36%
Ka/Ks Ratio 0.14506 (Ka = 0.0384, Ks = 0.265)

TRAP1 ENSG00000126602 (Human)

Gene Details

TNF receptor-associated protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000246957, Human)

Protein Percentage 89.2%
CDS Percentage 85.75%
Ka/Ks Ratio 0.08135 (Ka = 0.0558, Ks = 0.6863)

Trap1 ENSMUSG00000005981 (Mouse)

Gene Details

TNF receptor-associated protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000006137, Mouse)

Protein Percentage 88.1%
CDS Percentage 84.75%
Ka/Ks Ratio 0.0992 (Ka = 0.0645, Ks = 0.6502)

Trap1 ENSRNOG00000005418 (Rat)

Gene Details

TNF receptor-associated protein 1 (Trap1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000008966, Rat)

Protein Percentage 88.24%
CDS Percentage 84.61%
Ka/Ks Ratio 0.09061 (Ka = 0.0632, Ks = 0.697)

Genome Location

Sequence Coding sequence

Length: 2364 bp    Location: 1511218..1446827   Strand: -
Raw sequence   
>XM_004864762.1
ATGGCGGCGCAGGTCGGAGGTTCTCAGGCTCAGAGCGCAAGACTGTCGCCCTTGATAACTCGACCCAAGGTCAAGGAGGTCCGGCTCCCAGGACCCACGGTTAGTGGGGCCAACAGCTCCCCAGCAGGCAGAGCCCGGGTCAGCCCGGCGCGCTCCGTGACGTCTCCGCGCCGCTCCCGAGGATGGTCCAGCCCACAGCCATACCCAGCCAACTGTGCGCTCTGGCCCCTGAGGGAGGAAGACATGGCTCGCGAGTTTCGGGTGCTGCTGCTGTGGAGCCGCACTGTGCGGCCTCCGCTACGAGCTCCGGTTCTGGCGGCCGTCTCGGGAGGAAAGCCAGTTCTGTGTCCTCAGAGGTCTACAGTCCAGTTCAGGAGCCCCTGGCAACAACTGTCTTCTAGCTTCTATGCAAGACAACTATACAGCACACAGGCTGCTGAGGACAAGAAGGAGGAGCCCCTGCACTCCATCATAAGCAGCTCAGAGGTGGTGCAGGGTTCCATCTCCAAACACGAATTCCAGGCAGAGACAAAGAAGCTGTTGGACATTGTGGCCTGTTCCTTGTACTCAGAAAAAGAGGTGTTCATACGGGAGCTCATCTCCAATGCCAGTGATGCCCTGGAAAAACTGCGGCATAAACTAGTATCTGATGGCCAAACATTGCCAGAAATGGAGATTCACCTACAGACTGACACCGAGAAAGGAATCATCACAATCCAGGACACTGGCATCGGTATGACACAGGAGGAGCTGGTATCCAACCTAGGCACGATTGCCAGGTCAGGCTCAAAGGCCTTTCTGGAAGCACTACAGGACCAAGCAGAGGCCAGCAGCAAGATCATTGGCCAGTTTGGAGTGGGTTTCTACTCAGCTTTCATGGTGGCTGATAGAGTGGAGGTCTATTCCCGCTCTGCGGCTCCGGGAAGCCTAGGCTACCAATGGCTTTCAGATGGCTCTGGAGTGTTTGAAATCGCTGAAGCTTCAGGTGTTAGAACTGGGACCAAAATTATCATCCACCTCAAATCAGACTGCAGAGAGTTCGCCAGCGAGGCCCGGGTTCGAGATGTGGTGACAAAATATAGTAACTTCATCAGCTTCCCCCTGTACCTCAATGGAAGACGCATTAACACCTTGCAGGCCATCTGGATGATGGAGCCCAAGGAACTCAATGAGTTGCAGCATGAGCAGTTCTACCGCTACATTGCCCAGGCCTATGATAAGCCCCGCTACACCCTGCACTACAAGACAGATGCACCACTCAACATCCGGAGTATCTTCTATGTGCCAGAGACGAAACCATCCATGTTTGATGTGAGCAGGGAGCTGGGCTCCAGTGTTGCGCTGTATAGCCGAAAGGTTCTGATTCAGACCAAGGCTGCAGACATCCTGCCCAAGTGGCTGCGCTTCATCCGAGGTGTGGTGGACAGCGAGGACATCCCCCTAAATCTCAGCCGGGAGCTCCTGCAAGAGAGTGCCCTCATCAGGAAACTCCGGGATGTTCTACAGCAGAGGCTGATAAAGTTCTTCATTGACCAGAGTAAAAAAGATCCTGAGAAATATGCAAAGTTTTTTGAAGATTACAGCTTGTTTATGAGGGAGGGCATCGTGACCACCACAGAGCAGGAGGTCAAGGAGGAGATTGCGAAGCTGTTGCGCTACGAGTCCTCGGCACTGCCCGCTGGGCAGCTGGCCAGCCTTTCAGACTACGCCAGCCGTATGCAGGCCGGTACCCGCAATATCTATTACCTGTGTGCCCCCACCCGGCACTTGGCCGAACACTCACCCTACTATGAGGCTATGAAGCAGAAAAACACAGAGGTCCTCTTCTGCTATGAGCAGTTCGATGAGCTCACCTTGCTGCACCTTCGTGAGTTTGACAAGAAGAAGCTGATTTCTGTGGAGACAGACATAGTTGTTGATCACTACAAGGAAGAGAAGTTTGAGGACGCATCCCCAGCTGGTGAGTGCCTATCTGAGAAGGAGACAGAGGAGCTGATGGCCTGGATGCGGAACGTACTGGGGTCTCGAGTCACCAATGTGAAGGTGACTCTCCGCCTGGACACCCACCCTGCTATGGTGACTGTGCTAGAGATGGGGGCCGCCCGGCACTTCTTGCGTATGCAGCAGCTAGCCAGGACTCAGGAGGAGCGTGCGCAGCTCCTGCAGCCCACGCTAGAGATCAACCCCAGGCATACACTCATCAGGAAGCTCAGTGATCTGAGACAGCGTGAGCCAGAGCTGGCTCAGCTGCTTGTGGATCAGATCTATGAAAATGCCATGATAGCAGCAGGCCTTGTTGATGACCCCAGGCCCATGGTGGGCCGCCTGAACGACCTTCTCGTCAAGGCCTTGGAGAAACACTGA

Related Sequences

XP_004864819.1 Protein

Trap1 PREDICTED: heat shock protein 75 kDa, mitochondrial isoform X2 [Heterocephalus glaber]

Length: 787 aa      View alignments
>XP_004864819.1
MAAQVGGSQAQSARLSPLITRPKVKEVRLPGPTVSGANSSPAGRARVSPARSVTSPRRSRGWSSPQPYPANCALWPLREEDMAREFRVLLLWSRTVRPPLRAPVLAAVSGGKPVLCPQRSTVQFRSPWQQLSSSFYARQLYSTQAAEDKKEEPLHSIISSSEVVQGSISKHEFQAETKKLLDIVACSLYSEKEVFIRELISNASDALEKLRHKLVSDGQTLPEMEIHLQTDTEKGIITIQDTGIGMTQEELVSNLGTIARSGSKAFLEALQDQAEASSKIIGQFGVGFYSAFMVADRVEVYSRSAAPGSLGYQWLSDGSGVFEIAEASGVRTGTKIIIHLKSDCREFASEARVRDVVTKYSNFISFPLYLNGRRINTLQAIWMMEPKELNELQHEQFYRYIAQAYDKPRYTLHYKTDAPLNIRSIFYVPETKPSMFDVSRELGSSVALYSRKVLIQTKAADILPKWLRFIRGVVDSEDIPLNLSRELLQESALIRKLRDVLQQRLIKFFIDQSKKDPEKYAKFFEDYSLFMREGIVTTTEQEVKEEIAKLLRYESSALPAGQLASLSDYASRMQAGTRNIYYLCAPTRHLAEHSPYYEAMKQKNTEVLFCYEQFDELTLLHLREFDKKKLISVETDIVVDHYKEEKFEDASPAGECLSEKETEELMAWMRNVLGSRVTNVKVTLRLDTHPAMVTVLEMGAARHFLRMQQLARTQEERAQLLQPTLEINPRHTLIRKLSDLRQREPELAQLLVDQIYENAMIAAGLVDDPRPMVGRLNDLLVKALEKH