Details from NCBI annotation

Gene Symbol Slx4
Gene Name SLX4 structure-specific endonuclease subunit, transcript variant X6
Entrez Gene ID 101709821

Database interlinks

Part of NW_004624824.1 (Scaffold)

For more information consult the page for NW_004624824.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SLX4 ENSCPOG00000007413 (Guinea pig)

Gene Details

SLX4 structure-specific endonuclease subunit

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006686, Guinea pig)

Protein Percentage 80.8%
CDS Percentage 86.59%
Ka/Ks Ratio 0.48195 (Ka = 0.1175, Ks = 0.2439)

SLX4 ENSG00000188827 (Human)

Gene Details

SLX4 structure-specific endonuclease subunit

External Links

Gene Match (Ensembl Protein ID: ENSP00000294008, Human)

Protein Percentage 63.45%
CDS Percentage 73.39%
Ka/Ks Ratio 0.39266 (Ka = 0.2596, Ks = 0.661)

Slx4 ENSMUSG00000039738 (Mouse)

Gene Details

SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000038871, Mouse)

Protein Percentage 63.38%
CDS Percentage 73.26%
Ka/Ks Ratio 0.42926 (Ka = 0.2682, Ks = 0.6249)

Slx4 ENSRNOG00000024445 (Rat)

Gene Details

SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000031220, Rat)

Protein Percentage 63.7%
CDS Percentage 72.37%
Ka/Ks Ratio 0.40886 (Ka = 0.2769, Ks = 0.6773)

Genome Location

Sequence Coding sequence

Length: 4968 bp    Location: 1423276..1398405   Strand: -
>XM_004864757.1
ATGAATTCAACGAATAGTTGTCGAGCACTTATTACAAGTCAGGTACGAGATCAGCTAAAGGGAATACAAAGCAAAATAGAGAATGCTCCCAATGGTGACTCCCAGCGCTCTCGGTCCTATTTGACAACAGCAGCTGTGTCAAGTCCCTCCAAACCACGTACTGCAGAGCTGGTTCTTCAGCGGATGCAGCAGTTCAAGAGAGCAGACCCTGAGCGTTTGCGACATGCTTCAGAGGACTGCTTCCTGGAGGCCACACTGGAAGAAAATGTTCCACAGAGCCCTCAAGAGGAGATGGTGGCAGGAAATGAGAATGGACTGGGGCCCCCTGCCACCGACAGTGATGCTGCAGTGGCCTTGGTCCTGCAACAAGAGTTTGGAAGGGAAGGTGCATCTGCCCATGATGATAACCTGGAGGAGAAGGGGTTGTTCTTCTGCCAGATGTGTCAGAAGAACCTCTCAGCTATGAACGTGACCCGGAGGGAGCAGCATGTGAACAGGTGCTTGGATGAGGCTGAAAAGGCACTAGGACCTTCCACACCTCAGATCCCTGAATGTCCAATTTGTGGCAAGCTGTTTGTCACCTCGAAGAGCCGAATCAGCCACCTGAAGCAGTGTGCAATGAGGATGAAAGTGGGCCCCCAGCTCCTATTGCAGGCTGTGCGGATGCAGACAGCTCCACCTGAGGCAAGCAGCAGCCCTGTGGCTCCCAGCTTTAGCAACCTTGTTGGAGGTTGGAAACGGAAAGGAGCCACCACCAAGAAGGAGCCACAGAAGAGGCGGAAGGTTGATAAACCCGAGGTACCATCTGAGGACCTTCTGGTGGCCATCGCTCTGTCCCGATCTGAAATGGAGCAGGATCCAGCTGTGCCTGCACTCAGACTGGAAAGTGCTTTTTCTGAGAGGACGAGGCCAGGAGCAGAGAAGAAAAGTCGCAAGAGGAAACCCCTGGTGCCCCCACCGCAGTTGTTAGTCCAGGACTCCAACACCACAGATAGACAGATAGAGGATCGTGTGGCCCAGCTCCTTTCAGAGGAAATAGAATTGTCCAGTACACCACCACTTCCTGCCAGCAGGATTCTCAGGGAAAAACTGAAAGAAGCAGGTTGGTGTCTGCAGCTGCCTGAAGGAAAGGAGAACTTCCTGTGGGAGGGCAGTGCCCTGACCGGAACTTGGGCTATGGAGTGTTTCTACACAGAGACCCTGGTCCCTCCCATTGTGCTCCAGCAGCCCACCAAGGGTCTCACACAGGAGCCCAAGCTAACACTGGTGCTGCCTGTGCAGCCAGAGCCGGGTGTACAAAGGCCTCCTGCCCTCCACAGCAGCTTCCATGAAGGCTGCAGCCCCAGAGACCCATCACTGTCTGCCAGCCAGAGGGAGCGCCAGGCCCTGCAGGACCTCATGGACCTGGCAGAGGAAGGGCTGAGTGCCAACCCATGGCCTTGCAGTGGGGGCCTGGTCAGCTCTGGAGGGGCTCCAGGGTTGGATTTGGTGCCCAGCGGTGTTCCTCTGACCGGTTTTGCCCTGCCACCCGAGGAGAAGCCCCTTGAGAGAGATCACCACTCTTTGCTCTCCCTCGGGTTGCTGGCTGCTGATTTTGGTGCCATGGTCAATAACCCACACCTGAGCGACGTTCAGTTCCAGACAGACAGCGGGGAAGTACTTTATGCCCACAAGTTTGTGCTTTATGCCCGATGTCCACTTCTCATTCAGTATGTAAATAATGAAGGCTTCTCCGCTGTTGAAGATGGGGAAGAAACCCAGCGTGTACTACTAAGCAATGTGAGCACTGAGACCACCTGTGTGTTCCTGCGCTATCTCTACACAGCGGACACTGGTCTGCCGTCCCACCTGGCACCTGAGCTAGGCACCCTGGCCCAAAGGTTTGGTGTGAGTGACCTTGTCCACCTGTGTGAACAAGTGCCTGCTGTGATGGACTTGGAGAGCGAACGACAGGAGGAGAAGGAAGATGAGAACTCCGAAAGCAGAATGGAGAATTTCCAACAACTCTTGAGGTCAGTGTGGACCGATGAAGAGGAGGAACCAGAGACTTTGTTGAAATATGACGAAGACAGAGAAAAAGTGAATGAAGCAGACATGGAAGAAATTTACGAATTTGCAGCTACTCAGCGAAAGCTGCTGCAAGGGGGAAGAGCACCACATACAGATGAGGAGCCTGACCAGCCAGGAGAAGACAGTCCAGTTGCCGGACCTCCCCTGGCAAATGTCCTGGGAAGCAAACAGTTGGAAAAGGGAGAACAACTGGAGTTGTTGAGGCCAGGAGAATATAAGACCCCAGTCAGTGGGGAAAATGCAAGGCACTCCCTCCTGCTGCCCCCACGTACAAGCTCAGACAGGGCAGCGGATGCAAAGACTCAGCAGCAGACAGCACCAAAGAAGGCACCTGGCCCTAGCTCTTGTTGCCTTTCTGAGGGCAGCGAGGCTGGAAGACAAGACGACTTCCTCATGCACTCATTTGAGGTCCCTGCTTATGAACAGGTGTTTTCGTCAGCGCAAGAATTCTCTGAACTTGCCCAGATAACAAGTGATCACCAGGAACAGAGTGGCATTGTCAGGGAGAAGGGAATGGAGATGGCCTGTGCCCCGACTCCACAGCCAGACCAGAGCTGTCTCCCATCATGGCTTCCTGGTGGCTGGAGTCCCAGCCGATCACGGCTTCACCTTCATCACGCAAGTGATTCATCCCCATCCACGACCCAGTCACACAATGAAGTTTCCATGGTATCCCCCCGCAGCTCACCATCTCCAGCTCTACCATCAAAGCAGGATAGTGGCATTCTCACAGTACTTAAGGAGCCAGGCGACTGGAAAGGCAGAGGGTGTCATTCCGTATTGGAACACAAAAATAAGGGTGTCCTGATTTCTCCGGAAAAGTCTCTACCCATTGACCTGACGCAGTCAATACCTGACCCCTTGAGTACCAGGTCCCAGGATCCTCCCTCCCACATGAGCAGAGAGAACGAGATCATCCTTTTACTGGATTCAGATGAAGAGTTGGAGCTAGAACAGACCAAAACAAAGTTGGTTTCTAATGGTCCCTCAGAAGAAAGGAGTGTTCTAGACGTCAGCCATAAGTCCTCTGAACTATTTTCAGTCATTGATGTCGATGCAGATCAAGAGCATTCTCAGAGCCCCCCAAGGAGAGGGGGTGAGCTGCAGGTCAAGAGTGTGGAGGGACAGTTGGAGAATCAGGGTGTTGTGGCTGGCACATGGGCCTCCTGGTTAATCTGTGACCGTGAGAGCAGCCTCAATGAGGACAGTACCACAGATGCCTCCTGGCTGGTGCCCGCTACCCCAGTAGCCAGCAGGAGCCGTGACTGCTCATCACAGACCCAGATCACAAGCCTCAGGACCAGGCCTCCAGGAGATAAGATGGCTCGGCCCTCATCCAGGGCCACCCCAGAAAACACAGTGTTGGAGGCCACACAGAAGTTCTCAGTCATCACACCCCCAATGTCACCCATGCCTCCAGGAACTTCTTCGAGTGGAAGGCAGGTCCACAGGAGCCCTTCCCGTTCCCAATCCAGGCTCCTCAAGCTCTCTTCCCCAAGGGTCTCATGGCCCATGGCAGGAGGCCTCCCTGATTTCACTGGGCCAGTCCAGAAACTCTCACCAAATCAGGCAGAAGTGAGTGAAGTGGTGGAAGTTGGGGACAGTGAAGATGAGCCAGAGGTAGCTTCTCATCAAGTAAACAGAAGCCCCCTGCTGGATAGTGACCCCCCAATCCCTGTGGATGACTGTTGGAATGTTGAGCCCCTCTCGCCAATACCAATTGACCACCTGAACCTCGAGCGCACTGGCCCCCTGAACACCAGCAGTCCCAGCAGTCAGGCCCAGGAGCCTGTGGACAGTGGTGACTGTCTCTCCCCTGGACTCCTGGGCAGCACCCCCATCCGAGCAAGTGGCATGGCCCGAAGAGCATCTCTAGAGCAGTCCTCAGGGGCCGGCTCCCCAGCAGCCAGCAGGCTGAGCTTTCTGAATCCAGCCTTATGGGACGACTGGAACGGGGAAGGGCAGAAGTCCCCAGAGGCTCCTCCTGCAGCCCAGACCCTGCATTCCTTCCGAGCTCAGAAATCAGAAGGGCCAGAGATACCAAAAGGTGCTAATCGGAAGAAAAATTTGCCCCCCAAAGTGCCCATATCTCCAATGCCAAGGTATTCCATCATGGAGACTCCAGTGCTAAAGAAAGAACTGGACAGGTTTGGAGTCCGTCCTCTGCCCAAACGCCAGATGGTTCTGAAACTGAAGGAGATTTTCCATTACACTCACCAGACCCTGGAGTCAGACTCTGAGGAGGAGATTCAGTCCTCACAGGGGCCGCCGGAGATGCCTTGCAACCAGACCCTCCCCACTGAGGCCTATAACCCTTCCAGGGTGGGAGACTGCATCCCGCTTGAAGCCACTGAGAGCTGCAAGACCCAACAATACAAGGAACCTCAACATCAGCAGAAGCAGCCCAGCCAAAACATCCCACACCAGAGCAGGCCACAAGCTGAGAAGCCACCTCCAGGCCCTGATGTTGACACTCAGCTCTCAGCCTCCCAGAAATCTATGGCCACCTCTGTGGACAGCAGTGACAGCTCCTTTAGCTCACAAAGTTCCTCTTGTGAGTTTGGAGCCACCTTGCAGTCTGCACTTGAAGATGAGGAGGATGAGGGTGCAGGGGTCAGTGCATCCCAGGCAGCCAGCCAGGCACCAGACATGGAGGAAGCTGTGAGACGTTACATCCGCTCCAAGCCAGAGCTGTTCTACAAGGTCCTCATGTACCAGCCGCTTGAGCTGGCTGAACTGCAGGCTGAGCTGAAGCAAAATGGCATTCGTGTGCCCATGGGCAAGCTGCTGGACACCCTGGATGCCCTCTGCATCACTTTCACCACTGCCACAGCCCGGAAGGAGAAGCTCAAGCAGAAGGGACAGCAGAGGGGCAGGAAGAAAGGAGAGCGGGATTGA

Related Sequences

XP_004864814.1 Protein

Slx4 PREDICTED: structure-specific endonuclease subunit SLX4 isoform X6 [Heterocephalus glaber]

Length: 1655 aa      View alignments
>XP_004864814.1
MNSTNSCRALITSQVRDQLKGIQSKIENAPNGDSQRSRSYLTTAAVSSPSKPRTAELVLQRMQQFKRADPERLRHASEDCFLEATLEENVPQSPQEEMVAGNENGLGPPATDSDAAVALVLQQEFGREGASAHDDNLEEKGLFFCQMCQKNLSAMNVTRREQHVNRCLDEAEKALGPSTPQIPECPICGKLFVTSKSRISHLKQCAMRMKVGPQLLLQAVRMQTAPPEASSSPVAPSFSNLVGGWKRKGATTKKEPQKRRKVDKPEVPSEDLLVAIALSRSEMEQDPAVPALRLESAFSERTRPGAEKKSRKRKPLVPPPQLLVQDSNTTDRQIEDRVAQLLSEEIELSSTPPLPASRILREKLKEAGWCLQLPEGKENFLWEGSALTGTWAMECFYTETLVPPIVLQQPTKGLTQEPKLTLVLPVQPEPGVQRPPALHSSFHEGCSPRDPSLSASQRERQALQDLMDLAEEGLSANPWPCSGGLVSSGGAPGLDLVPSGVPLTGFALPPEEKPLERDHHSLLSLGLLAADFGAMVNNPHLSDVQFQTDSGEVLYAHKFVLYARCPLLIQYVNNEGFSAVEDGEETQRVLLSNVSTETTCVFLRYLYTADTGLPSHLAPELGTLAQRFGVSDLVHLCEQVPAVMDLESERQEEKEDENSESRMENFQQLLRSVWTDEEEEPETLLKYDEDREKVNEADMEEIYEFAATQRKLLQGGRAPHTDEEPDQPGEDSPVAGPPLANVLGSKQLEKGEQLELLRPGEYKTPVSGENARHSLLLPPRTSSDRAADAKTQQQTAPKKAPGPSSCCLSEGSEAGRQDDFLMHSFEVPAYEQVFSSAQEFSELAQITSDHQEQSGIVREKGMEMACAPTPQPDQSCLPSWLPGGWSPSRSRLHLHHASDSSPSTTQSHNEVSMVSPRSSPSPALPSKQDSGILTVLKEPGDWKGRGCHSVLEHKNKGVLISPEKSLPIDLTQSIPDPLSTRSQDPPSHMSRENEIILLLDSDEELELEQTKTKLVSNGPSEERSVLDVSHKSSELFSVIDVDADQEHSQSPPRRGGELQVKSVEGQLENQGVVAGTWASWLICDRESSLNEDSTTDASWLVPATPVASRSRDCSSQTQITSLRTRPPGDKMARPSSRATPENTVLEATQKFSVITPPMSPMPPGTSSSGRQVHRSPSRSQSRLLKLSSPRVSWPMAGGLPDFTGPVQKLSPNQAEVSEVVEVGDSEDEPEVASHQVNRSPLLDSDPPIPVDDCWNVEPLSPIPIDHLNLERTGPLNTSSPSSQAQEPVDSGDCLSPGLLGSTPIRASGMARRASLEQSSGAGSPAASRLSFLNPALWDDWNGEGQKSPEAPPAAQTLHSFRAQKSEGPEIPKGANRKKNLPPKVPISPMPRYSIMETPVLKKELDRFGVRPLPKRQMVLKLKEIFHYTHQTLESDSEEEIQSSQGPPEMPCNQTLPTEAYNPSRVGDCIPLEATESCKTQQYKEPQHQQKQPSQNIPHQSRPQAEKPPPGPDVDTQLSASQKSMATSVDSSDSSFSSQSSSCEFGATLQSALEDEEDEGAGVSASQAASQAPDMEEAVRRYIRSKPELFYKVLMYQPLELAELQAELKQNGIRVPMGKLLDTLDALCITFTTATARKEKLKQKGQQRGRKKGERD