Details from NCBI annotation

Gene Symbol Hcfc1r1
Gene Name host cell factor C1 regulator 1 (XPO1 dependent), transcript variant X2
Entrez Gene ID 101724868

Database interlinks

Part of NW_004624824.1 (Scaffold)

For more information consult the page for NW_004624824.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

HCFC1R1 ENSCPOG00000008472 (Guinea pig)

Gene Details

host cell factor C1 regulator 1 (XPO1 dependent)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007616, Guinea pig)

Protein Percentage 72.04%
CDS Percentage 78.14%
Ka/Ks Ratio 0.48869 (Ka = 0.2137, Ks = 0.4373)

HCFC1R1 ENSG00000103145 (Human)

Gene Details

host cell factor C1 regulator 1 (XPO1 dependent)

External Links

Gene Match (Ensembl Protein ID: ENSP00000248089, Human)

Protein Percentage 81.9%
CDS Percentage 84.48%
Ka/Ks Ratio 0.18633 (Ka = 0.0979, Ks = 0.5257)

Hcfc1r1 ENSMUSG00000023904 (Mouse)

Gene Details

host cell factor C1 regulator 1 (XPO1-dependent)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000024697, Mouse)

Protein Percentage 79.31%
CDS Percentage 83.05%
Ka/Ks Ratio 0.22896 (Ka = 0.1143, Ks = 0.499)

Hcfc1r1 ENSRNOG00000003542 (Rat)

Gene Details

host cell factor C1 regulator 1 (XPO1-dependent) (Hcfc1r1), transcript variant 1, mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000004702, Rat)

Protein Percentage 79.17%
CDS Percentage 84.72%
Ka/Ks Ratio 0.25894 (Ka = 0.1123, Ks = 0.4339)

Genome Location

Sequence Coding sequence

Length: 351 bp    Location: 768183..766554   Strand: -
>XM_004864708.1
ATGATCCTGCAGCAGCCCCTGGAACGGGCCTCCCCAGGTCTCGCCCTGCGGGCCACCTCGGGGGTGACTCGGGGCCTGGACACCAGGGAGGCCTTGCGCAAGCAGTTCCTGACTGAGGAGAACATGGCCACCCACTTCTCCCGACTCAGCCTACATAATGACCACCCCTACTGCAGCCCCCCCATGCCTTTCCTCCCTGCCCTGCCCCCACTCAGGAGCCCTTGCTCGGAGTTGTTTCTCTGGCGATACCCTGGAAGCCTGATCCCAGAGGCCCTCCGGCTGCTGAGGCTAGGGGATACCCCTACCCCCCATTTTGCTGCAACCCCAGCTGGGGATATAATGGAGCTCTGA

Related Sequences

XP_004864765.1 Protein

Hcfc1r1 PREDICTED: host cell factor C1 regulator 1 isoform X2 [Heterocephalus glaber]

Length: 116 aa      View alignments
>XP_004864765.1
MILQQPLERASPGLALRATSGVTRGLDTREALRKQFLTEENMATHFSRLSLHNDHPYCSPPMPFLPALPPLRSPCSELFLWRYPGSLIPEALRLLRLGDTPTPHFAATPAGDIMEL