Details from NCBI annotation

Gene Symbol Abca3
Gene Name ATP-binding cassette, sub-family A (ABC1), member 3, transcript variant X4
Entrez Gene ID 101704653

Database interlinks

Part of NW_004624824.1 (Scaffold)

For more information consult the page for NW_004624824.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ABCA3 ENSCPOG00000008402 (Guinea pig)

Gene Details

ATP-binding cassette, sub-family A (ABC1), member 3

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007553, Guinea pig)

Protein Percentage 95.54%
CDS Percentage 92.72%
Ka/Ks Ratio 0.08502 (Ka = 0.0221, Ks = 0.2595)

ABCA3 ENSG00000167972 (Human)

Gene Details

ATP-binding cassette, sub-family A (ABC1), member 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000301732, Human)

Protein Percentage 88.85%
CDS Percentage 85.43%
Ka/Ks Ratio 0.07206 (Ka = 0.0578, Ks = 0.8015)

Abca3 ENSMUSG00000024130 (Mouse)

Gene Details

ATP-binding cassette, sub-family A (ABC1), member 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000045285, Mouse)

Protein Percentage 88.97%
CDS Percentage 85.74%
Ka/Ks Ratio 0.08804 (Ka = 0.0572, Ks = 0.6494)

Genome Location

Sequence Coding sequence

Length: 5115 bp    Location: 144057..85463   Strand: -
>XM_004864644.1
ATGGCAGTGCTACGGCAGCTGGTACTCTTGCTGTGGAAGAACTACACTTTGCAGAAGAGGAAGGTCCTAGTGACAGTCCTGGAACTCTTTCTACCCCTGCTGTTTTCTGGGATCCTGATTTGGCTTCGCTTGAAGATCCAGTCGGAAAATGTGCCCAATGCCACTGTCTACCCTGGCCAGTCCATCCAGGCGCTGCCCCTCTTTTTCAACTTCCCTCCGCCAAGGGGCACCTGGGAGCTGGCCTACATCCCTTCACACAGTGCTGCTGCAAAGACCATCACAGAGTCAGTGAGAAGGGCGCTGGTGATCAACATAAGAGTGCACAGCTTTCCCTCTGAGAAGGACTTCGAGGACTATATCCGGTATAACAACCATTCCTCCAATGTGCTGGCTGCTGTAGTTTTTGAGAACATTTCCAGCCACAGCAAGGAGCCCCTGCCACTGGCGGTGAAATATCACCTACGCTTCAGTTACACACGGAGAAATTACATGTGGACTCAAACAGGCAACTTTTTCCTGAAGGAGACAGAAGGCTGGCACACCACTTCCCTTTTTCCGCTTTTCCCAAACCCAGGACCAAGAGAGCCTACATCCGCTGACGGTGGAGAGCCTGGCTACATCCACGAGGGCTTCCTGGCAGTGCAGCATGCCGTGGACAGAGCCATCATGCACTACCATGCCAACACCTCGGCACACCAGCTCTTCCAGAAGCTCACAGTGATCGCAAAGAGGTTCCCATTCCCCCCATTTATCTCAGATCACTTCCTTGTTGCCATCCAGTACCAGCTTCCCCTGCTACTCATGCTGAGCTTCACCTACACATCCCTCACCATCATCCGGGCTGTGGTGCAGGAGAAAGAGAAAAAACTGAAGGAGTATATGCGCATGATGGGGCTTAGCAGTTGGCTGCACTGGAGCGCCTGGTTCCTCATGTTCTTCCTCTTCCTTCTCATCGCAGTTTCCTTCATGACACTGCTTTTCTGTGTCAAGGTGAAGAAGGATGTAGCGGTACTCTCCAGCAGTGATCCCTCTCTGGTGCTGGTCTTCCTGGTGTGTTTCGCCATTTCCTCCATCTCCTTCAGTTTCATGGTCAGCACATTCTTCAGTAAAGCCAACATGGCAGCGGCTGTGGGTGGCTTCCTGTACTTCTTCACATACATCCCTTACTTCTTCGTGGCTCCCCACTACAACTGGATGACACTAAACCAGAAGCTCTTGTCCTGTCTCCTGTCCAACGTTGCCATGGCAATGGGAGCCCAGCTCATAGGAAAATTTGAAGCCAAAGGCACGGGCATCCAGTGGCAAAACCTCCTGAGTCCTGTCAATGTGGACGATGATTTCTGCTTTGGGCAAGTGATAGGGATGCTGCTTCTGGACTCTGTGCTCTATGGCCTGGTGACCTGGTACATGGAGGCCGTCTTTCCAGGCCAGTTTGGTGTGCCCCAGCCCTGGTACTTCTTCCTCCTGCCATCCTACTGGTGTGGGAACCCAAGGATGGTTGTAGGGAAAGAGGAAGAGGACAGTGACCCCGAAAAAGTGCTCAGAACTGAGTACTTTGAAGCTGAGCCCGAGAACCTGGTGGCTGGGATCAAGATCAAGCATCTATCCAAGGTCTTCCAAGTGGGGAATAAGGAAAAGGCAGCCGTGAGGGACCTGAACCTGAACCTGTACGAAGGGCAGATTACCGTTCTGCTGGGCCACAACGGGGCAGGAAAGACCACCACCCTGTCCATGCTCACAGGACTCTTCCCCCCTACCAGTGGACGTGCCTATATTGGTGGGTATGAAATTTCCCAAGACATGGTTCAAATCCGGAAGAGCTTGGGCCTGTGCCCCCAGCATGATGTCCTGTTTGACAACCTTACAGTTGCTGAACATCTTTGCTTCTATGCACAGCTGAAAGGCCTGTCTCACCACAAATGCCCTGAAGAAGTCAAGCAGATGCTGCACATCCTCAGTCTGGAGGACAAGAGGAACTCGCTGTGCAGGTTCCTGAGTGGGGGCATGAAGCGCAGGCTCTCTATTGGGATCGCTCTCATCGCAGGCTCTAAGGTATTGATGCTAGATGAGCCCACCTCGGGAATGGATGCCATCTCCAGGAGGGCCATCTGGGACCTGCTTCAGCAGCAGAAAAGTGACCGCACCATCCTGCTAACCACCCACTTCATGGATGAAGCAGACCTGCTGGGGGACCGCATTGCCATCATGGCCAAGGGCGAGCTGCAATGCTGTGGTTCCTCTCTGTTCCTCAAGCAGAAATATGGCGCTGGTTACCACATGACACTAGTGAAGGAGCCACATTGCGACCCCAAAGCCATCTCCCAGCTGGTATACCACCACATCCCCAATGCCACTCTGGAAAGCAGTGCTGGGGCTGAGCTGTCCTTTATTCTTCCCAAGGAGAGCACACACAGGTTTGAAAGTCTTTTTGCTAAACTGGAAAAGAAGCAGAAAGAATTGGGCATCGCCAGCTATGGGGCATCTGTCACCACCATGGAAGAAGTCTTCCTTCGGGTTGGTAAATTGGTGGACACTAGCATGGACATCCAAGCCATCCAGCTCCCTGCACTGCAGTACCAGCATGAGAGGCGGGCCAGTGATTGGGCTGTGGACAGCAACCTGTGCGGGGTGATGGACCCCACTGATGGCATTGGCGCTCTCATTGAACAGGAGAATGTGATGGTCCAGCTCAATACTGGGCTTGCCCTCCACTGCCAGCAGTTCTGGGCCATGTTCTTGAAGAAAGCCACATACAGCTGGCGGGAGTGGAAGATGGTAGCAGCGCAGATCCTGGTCCCTCTAACCTGTGTCACCCTGGCCCTCTTGGCCATCAACTACTCCTCGGAGGTTTTTGATGACCCCATCCTGAAGCTGAGCTTGGGCGAGTATGGAAGAACCATTGTGCCTTTCTCAGTCCCTGGTACCTCACGGCTGGATCAGCAGCTGTCAGAGCACCTGAGGGACATGCTGCAGGCAGCAGGACAGGAGCCCCGTGAGGTGCTAGGTGACCTGGAAGAGTTCCTGGTTTTCAGGGCCTCAGTGGAGGGTGGCGGCTTTAACGAGCGGTGTCTAGTGGCAGTGTCCTTCAGAGATGTAGGAGAGCAAACTGTGGTCACTGCCCTGTTCAACAATCAGGCATACCACTCCCCGGCCACTGCCCTGGCTATCGTGGACAACCTTCTATTCAAGCTGCTGTGTGGCCCCCAGGCCTCCATCGAGGTCTCCAACTACCCCCAGCCCCGGAGCACCCTCCAAGCTGCCAAGGACCAGTTCAGTGAGGGCCGAAAGGGATTTGACATTGCCCTCAATTTGCTCTTTGCCATGGCATTCCTGGCTAGCACATTTTCCATTCTGGCCGTCAGAGAGAGGGCTGTCTGGGCTAAGCATGTCCAGTTTGTGAGTGGCATCCATGTGGCTGCTTTCTGGCTCTCTGCTCTACTGTGGGACCTTATCTCCTTCCTCATCCCCATTCTGCTGCTGCTGGTGGTATTCCGGGCCTTCGATGTACGCGCCTTCACGCAGGATGGCCATGCGGCTGACATGCTGCTGTTGCTCATGCTCTACGGCTGGGCCATTGTCCCCCTCATGTACCTCCTGAGTTTCTTCTTTTCCGGTGCATCCACTGCCTACACAAGGCTGACCATACTCAATATCCTGTCTGGCATCGCCACCTTCCTCATAGTCACTATCATGCGCATCCCAGCCTTGAAGTTAGAAGAACTTTCCAGAACGCTGGATCAAGTGTTCCTGGTGCTGCCCAACCACTGCCTAGGGATGGCGGTCAGCAGCTTCTATGAGAACTACGAGACACAGCGGTACTGCACCTCCTCAGAGGTTGCCACCCACTACTGCAGGAAATACAACATCAAGTACCAGGAGAATTTCTACGCCTGGAGCACTCCAGGGGTCGGCAGGTTTGTGACCTCCATGGCCACCTCAGGGTGTGTCTACCTCACCTTGCTCTTCCTCATCGAGACCAACCTGCTGTGGAGACTGAGGACATTAGTCTATGCCTTCTGGAGGAGGTGGACACTGGCAGAATTGCACAGCCAAACATCAGTGGTTCCTGAGGACCTGGATGTTGCACAAGAGAGGAGCAGAGTCCTGACCCCCAGCCTGGATTCTCTGCTCGACACACCTCTAATCATCAAGGAGCTCTCTAAGGTGTATGAACAGCAGGCACCCCTCATTGCTGTAGACAGGATCTCTCTCGCAGTCCAGAAAGGGGAATGCTTTGGTCTCCTGGGTTTCAATGGAGCTGGAAAGACCACAACATTCAAAATGCTGACCGGGGAAGAGACCATCACCTCAGGGGATGCCTTCGTTGGGGGCCACAGCATCAGCTCTGACATTGGAAAGGTGCGCCAGCGGATGGGCTACTGCCCTCAGTTTGATGCCCTACTGGACCACATGACTGGCCGGGAGATGCTGGTCATGTATGCACGTCTACGGGGCATCCCTGAGCGCCTCATTGGTGCTTGTGTAGAAAACACACTGCGGGGCCTGCTTCTGGAGCCACACGCCAACAAGCTGGTCAGATCATACAGTGGTGGGAACAAGCGCAAGCTGAGCACTGGCATTGCCCTCATCGGTGAGCCTGCAGTCATCTTCCTGGATGAGCCATCCACTGGCATGGACCCCGTGGCCCGGCGCCTGCTTTGGGACACCGTGGCCCGGGCTCGAGAGGCTGGCAAGGCCATTGTCATCACCTCCCACAGCATGGAGGAATGTGAGGCCTTGTGCACCCGGCTGGCCATCATGGTGCAGGGTCAGTTCAAGTGCCTGGGCAGCCCTCAGCACCTCAAGAGCAAGTTTGGCAGTGGCTACTCCCTGCAGGCCAAGGTCCGGAGCGAAGGGCAGCTGGAAGCACTAGAGAAATTCAAGGCATTTGTGGACCTGACCTTTCCAGGAAGCGTCCTGGAAGATGAACACCAAGGCATGGTCCACTACCACCTGCCTGGCCACAGCCTGAGCTGGGCAAAGGTTTTTGGTATCCTGGAGAAAGCCAAGGAGAAGTATGGAGTGGACGACTACTCAGTGAGCCAGATCTCACTGGAGCAAGTCTTCCTGAGCTTCGCTCACCTACAACCCCCCACTGCTGAGGAAGGGCGATAA

Related Sequences

XP_004864701.1 Protein

Abca3 PREDICTED: ATP-binding cassette sub-family A member 3 isoform X4 [Heterocephalus glaber]

Length: 1704 aa     
>XP_004864701.1
MAVLRQLVLLLWKNYTLQKRKVLVTVLELFLPLLFSGILIWLRLKIQSENVPNATVYPGQSIQALPLFFNFPPPRGTWELAYIPSHSAAAKTITESVRRALVINIRVHSFPSEKDFEDYIRYNNHSSNVLAAVVFENISSHSKEPLPLAVKYHLRFSYTRRNYMWTQTGNFFLKETEGWHTTSLFPLFPNPGPREPTSADGGEPGYIHEGFLAVQHAVDRAIMHYHANTSAHQLFQKLTVIAKRFPFPPFISDHFLVAIQYQLPLLLMLSFTYTSLTIIRAVVQEKEKKLKEYMRMMGLSSWLHWSAWFLMFFLFLLIAVSFMTLLFCVKVKKDVAVLSSSDPSLVLVFLVCFAISSISFSFMVSTFFSKANMAAAVGGFLYFFTYIPYFFVAPHYNWMTLNQKLLSCLLSNVAMAMGAQLIGKFEAKGTGIQWQNLLSPVNVDDDFCFGQVIGMLLLDSVLYGLVTWYMEAVFPGQFGVPQPWYFFLLPSYWCGNPRMVVGKEEEDSDPEKVLRTEYFEAEPENLVAGIKIKHLSKVFQVGNKEKAAVRDLNLNLYEGQITVLLGHNGAGKTTTLSMLTGLFPPTSGRAYIGGYEISQDMVQIRKSLGLCPQHDVLFDNLTVAEHLCFYAQLKGLSHHKCPEEVKQMLHILSLEDKRNSLCRFLSGGMKRRLSIGIALIAGSKVLMLDEPTSGMDAISRRAIWDLLQQQKSDRTILLTTHFMDEADLLGDRIAIMAKGELQCCGSSLFLKQKYGAGYHMTLVKEPHCDPKAISQLVYHHIPNATLESSAGAELSFILPKESTHRFESLFAKLEKKQKELGIASYGASVTTMEEVFLRVGKLVDTSMDIQAIQLPALQYQHERRASDWAVDSNLCGVMDPTDGIGALIEQENVMVQLNTGLALHCQQFWAMFLKKATYSWREWKMVAAQILVPLTCVTLALLAINYSSEVFDDPILKLSLGEYGRTIVPFSVPGTSRLDQQLSEHLRDMLQAAGQEPREVLGDLEEFLVFRASVEGGGFNERCLVAVSFRDVGEQTVVTALFNNQAYHSPATALAIVDNLLFKLLCGPQASIEVSNYPQPRSTLQAAKDQFSEGRKGFDIALNLLFAMAFLASTFSILAVRERAVWAKHVQFVSGIHVAAFWLSALLWDLISFLIPILLLLVVFRAFDVRAFTQDGHAADMLLLLMLYGWAIVPLMYLLSFFFSGASTAYTRLTILNILSGIATFLIVTIMRIPALKLEELSRTLDQVFLVLPNHCLGMAVSSFYENYETQRYCTSSEVATHYCRKYNIKYQENFYAWSTPGVGRFVTSMATSGCVYLTLLFLIETNLLWRLRTLVYAFWRRWTLAELHSQTSVVPEDLDVAQERSRVLTPSLDSLLDTPLIIKELSKVYEQQAPLIAVDRISLAVQKGECFGLLGFNGAGKTTTFKMLTGEETITSGDAFVGGHSISSDIGKVRQRMGYCPQFDALLDHMTGREMLVMYARLRGIPERLIGACVENTLRGLLLEPHANKLVRSYSGGNKRKLSTGIALIGEPAVIFLDEPSTGMDPVARRLLWDTVARAREAGKAIVITSHSMEECEALCTRLAIMVQGQFKCLGSPQHLKSKFGSGYSLQAKVRSEGQLEALEKFKAFVDLTFPGSVLEDEHQGMVHYHLPGHSLSWAKVFGILEKAKEKYGVDDYSVSQISLEQVFLSFAHLQPPTAEEGR