Details from NCBI annotation

Gene Symbol Cnppd1
Gene Name cyclin Pas1/PHO80 domain containing 1, transcript variant X2
Entrez Gene ID 101726110

Database interlinks

Part of NW_004624823.1 (Scaffold)

For more information consult the page for NW_004624823.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CNPPD1 ENSCPOG00000004579 (Guinea pig)

Gene Details

cyclin Pas1/PHO80 domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004128, Guinea pig)

Protein Percentage 93.15%
CDS Percentage 92.09%
Ka/Ks Ratio 0.17213 (Ka = 0.0372, Ks = 0.2159)

CNPPD1 ENSG00000115649 (Human)

Gene Details

cyclin Pas1/PHO80 domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000386277, Human)

Protein Percentage 88.51%
CDS Percentage 88.26%
Ka/Ks Ratio 0.19804 (Ka = 0.066, Ks = 0.3335)

Cnppd1 ENSMUSG00000033159 (Mouse)

Gene Details

cyclin Pas1/PHO80 domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000132688, Mouse)

Protein Percentage 83.54%
CDS Percentage 85.18%
Ka/Ks Ratio 0.25715 (Ka = 0.0999, Ks = 0.3886)

Cnppd1 ENSRNOG00000018325 (Rat)

Gene Details

cyclin Pas1/PHO80 domain containing 1 (Cnppd1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000024975, Rat)

Protein Percentage 83.82%
CDS Percentage 85.05%
Ka/Ks Ratio 0.2563 (Ka = 0.1012, Ks = 0.3947)

Genome Location

Sequence Coding sequence

Length: 1233 bp    Location: 5846300..5851860   Strand: +
>XM_004864557.1
ATGGACCTGGCCGGGCTCCTACTGGACGAAGAAGGCACCTTTTCCCTCACCGGCTTCCAAGACTTCACGTTCCTCCCAGGACACCAGAAGCTGAGTGCCCGAATCCGAAGGCGGCTATACTATGGCTGGGACTGGGAGGCCGACTGCAGCCTGGAGGAGCTCTCCAGCCCTGTGGCAGACATTGCTGTGGAACTGCTCCAGAAGGCAGCCCCCAGCCCTATTCGCCGGCTCCAGAAGAAATATGTGGCTCATGTGTCCCGAGAGGCGTGCATCTCCCCGTGTGCCATGATGCTAGCTCTGGTGTACATTGAGCGGCTCCGGCACCGAAACCCAGATTACCTGCAGCACGTATCATCTTCTGACTTGTTCCTGATCTCCATGATGGTGGCCAGCAAGTACCTCTACGACGAAGGGGAGGAGGAGGAGGTCTTCAATGATGAGTGGGGAGCTGCTGGGGGTGTGGCTGTGCCCACTCTCAATGCCTTGGAGAGGAGCTTCCTGAGTGCCATGGATTGGCGTCTCTACATTGATCCTGGGGAGATCTTTGAGGTGCTGAGCTGGCTGGAGAGCCGTGTGGCTGCGCAGCAGGGGCGACGGCGGGGCTGGTACACCTATACAGACCTGTGTGTGCTGCTGGAGCAGCCAGCTTGGCAGCTGGCCTTGGGCTCCCTCTGCCAGCGACTAGTAAAGCTGTCCTGCCTGTTAGCCATGGCATATGTGAGCAGCGTAGCCCTGGCTGTGGCATCAGTGGCTGTAATACACCAGTCCTTAGGGCTGTCCTGTCACCCCTCACCTGGCCCTCCTGACCTTGGCCTGGCCTCCAAGGGCCTTTTGGAGCCCTGCATTCCTTCTCCAGTGCCGAAGTGCCTGCCATCTTCTAACATCTCCAGCTGCGTGGAAGGTGACGCAGGGCTGCGTTCACTCTGGGACAGTCTTCTGGCCTCACTGACTTCCCCATCATTGCCTCCTCCAGAACCTCCTTCCCTGGCCCCTCTTCTACATAACTGCCCCCTTTGTCAGAAACTCCAGAGAGACCCCCCAGCCTGCCATGCCTGCCACCATCCCAACTATACGCTACCCGCTGGGCCTCCCAGCCCCTGGTACCACACCCACGGCCTGGCTCCACCTTGGCCCTGGAGCCCAATGGCCCCTCCGCTTCCCCATCCCCAGCAGTGTTCTCTTTTCAGTGTGATGGAGCTGGCCCGCCTCAAGTCTTTCATTTTCCCAGGCTAG

Related Sequences

XP_004864614.1 Protein

Cnppd1 PREDICTED: protein CNPPD1 isoform X2 [Heterocephalus glaber]

Length: 410 aa      View alignments
>XP_004864614.1
MDLAGLLLDEEGTFSLTGFQDFTFLPGHQKLSARIRRRLYYGWDWEADCSLEELSSPVADIAVELLQKAAPSPIRRLQKKYVAHVSREACISPCAMMLALVYIERLRHRNPDYLQHVSSSDLFLISMMVASKYLYDEGEEEEVFNDEWGAAGGVAVPTLNALERSFLSAMDWRLYIDPGEIFEVLSWLESRVAAQQGRRRGWYTYTDLCVLLEQPAWQLALGSLCQRLVKLSCLLAMAYVSSVALAVASVAVIHQSLGLSCHPSPGPPDLGLASKGLLEPCIPSPVPKCLPSSNISSCVEGDAGLRSLWDSLLASLTSPSLPPPEPPSLAPLLHNCPLCQKLQRDPPACHACHHPNYTLPAGPPSPWYHTHGLAPPWPWSPMAPPLPHPQQCSLFSVMELARLKSFIFPG