Sequence details NCBI ID: XM_004864538.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Atg9a
Gene Name autophagy related 9A
Entrez Gene ID 101720635

Database interlinks

Part of NW_004624823.1 (Scaffold)

For more information consult the page for NW_004624823.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ATG9A ENSCPOG00000025686 (Guinea pig)

Gene Details

autophagy related 9A

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000019291, Guinea pig)

Protein Percentage 99.28%
CDS Percentage 94.6%
Ka/Ks Ratio 0.02025 (Ka = 0.0045, Ks = 0.2224)

ATG9A ENSG00000198925 (Human)

Gene Details

autophagy related 9A

External Links

Gene Match (Ensembl Protein ID: ENSP00000386710, Human)

Protein Percentage 98.09%
CDS Percentage 92.81%
Ka/Ks Ratio 0.03036 (Ka = 0.0095, Ks = 0.3134)

Atg9a ENSMUSG00000033124 (Mouse)

Gene Details

autophagy related 9A

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000047449, Mouse)

Protein Percentage 98.45%
CDS Percentage 91.66%
Ka/Ks Ratio 0.02257 (Ka = 0.0093, Ks = 0.4106)

Atg9a ENSRNOG00000018975 (Rat)

Gene Details

autophagy related 9A (Atg9a), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000025740, Rat)

Protein Percentage 98.93%
CDS Percentage 91.46%
Ka/Ks Ratio 0.01565 (Ka = 0.0066, Ks = 0.4225)

Genome Location

Sequence Coding sequence

Length: 2520 bp    Location: 5788038..5797534   Strand: +
Raw sequence   
>XM_004864538.1
ATGGCTCAGTTTGACACCGAATACCAGCGCCTAGAGGCCTCCTACAGCGATTCACCCCCTGGGGAAGAGGACCTATTGGTGCACGTGGCTGAGGGAAGCAAGTCACCTTGGCACCATATTGAAAACCTTGACCTCTTCTTCTCCCGAGTTTATAATCTACACCAGAAGAATGGCTTCACGTGTATGCTCATTGGGGAGATCTTTGAGCTCATGCAGTTCCTCTTTGTGGTTGCCTTCACCACCTTCCTGGTTAGCTGTGTGGACTACGACATCCTATTTGCCAACAAAATGGTGAACCACAGTTTGCATCCTACTGAACCTGTCAAGGTCACTCTTCCAGATGCCTTTTTGCCTGCCCAAGTCTGTAGTGCCAGGATTCAAGAAAATGGCTCCCTTATCACCATCCTGGTCATCGCTGGTGTCTTCTGGATCCACCGGCTTATCAAGTTCATCTATAACATCTGCTGCTATTGGGAGATCCACTCCTTCTACCTGCATGCTCTACGAATCCCCATGTCTGCCCTTCCATATTGCACGTGGCAGGAAGTGCAGGCCCGGATTGTGCAGACCCAGAAAGAGCACCAGATCTGCATCCACAAGCGTGAGCTGACGGAGCTAGACATCTATCATCGCATCCTCCGCTTCCAGAACTACATGGTGGCACTGGTAAATAAGTCCCTCCTGCCTCTGCGCTTCCGTCTGCCTGGCCTCGGGGAGGTCGTCTTCTTCACCCGTGGCCTCAAGTACAACTTTGAGCTGATCCTCTTCTGGGGACCTGGCTCTCTGTTTCTCAATGAATGGAGCCTCAAAGCTGAGTACAAACGTGGTGGGCAACGACTAGAGCTGGCCCAGCGCCTCAGCAACCGCATCCTATGGATTGGCATCGCCAACTTCCTGCTGTGCCCCCTCATCCTCATCTGGCAGATCCTCTATGCCTTCTTCAGCTATGCTGAGGTGCTCAAGCGGGAGCCAGGGGCCCTGGGAGCACGCTGCTGGTCACTCTATGGCCGCTGCTACCTCCGCCACTTCAACGAGCTGGAGCATGAGCTGCAGTCCCGTCTCAACCGTGGCTACAAACCTGCCTCCAAGTACATGAATTGCTTCTTGTCACCTCTGCTGACACTGCTGGCCAAGAATGGCGCCTTCTTCGCTGGCTCCATCTTGGCCGTGCTTATTGCCCTCACCATCTATGATGAAGATGTGTTGGCTGTGGAGCACGTCCTCACCACCGTCACACTCCTGGGGGTGACCGTGACTGTGTGCAGGTCCTTCATCCCAGACCAGCACATGGTGTTCTGCCCCGAGCAGCTGCTCCGCGTGATCCTTGCTCACATCCACTACATGCCTGACCACTGGCAGGGTAATGCCCACCGCTCGCAGACCCGGGACGAGTTTGCCCAGCTCTTCCAGTACAAGGCAGTATTTATCTTGGAAGAGTTGCTGAGTCCCATTGTCACACCACTCATCCTCATCTTCTGCCTTCGTCCACGGGCCCTAGAGATCATAGACTTCTTCCGCAACTTCACCGTGGAGGTCGTTGGGGTTGGGGATACCTGCTCCTTTGCTCAGATGGATGTTCGCCAGCATGGTCATCCCCAGTGGCTATCTGGTGGGCAGACAGAGGCCTCAGTGTACCAGCAAGCTGAGGACGGGAAGACAGAATTATCACTCATGCACTTTGCCATTACCAACCCTGGATGGCAGCCACCTCGTGAGAGCACAGCCTTCCTGGGCTTCCTGAAGGAGCAGGTTCAGCGGGATGGAGCAGCTGCTGGCCTTGCCCAAGGGGGTCTACTCCCCGAAAATGCCCTCTTCACATCCATCCAGTCCTTACAATCTGAGACTGAGCCCCTGAGCCTTATTGCAAATGTGGTAGCTGGCTCATCCTGCCGGGGCCCCCCACTGCCCAGAGACCTGCAGGGCTCCAGGCACAGGGCTGAAGTTGCCTCTGCCCTGCGCTCCTTCTCCCCTCTGCAGCCTGGGCAGGCCCCCACAGGCCGGGTGCCCAGCACCATGACAGGCTCTGGAGTAGATGCCAGGACAGCCAGCTCCGGGAGCAGTGTGTGGGAAGGACAGCTGCAGAGCCTGGTGCTGTCGGAATACGCATCCACTGAGATGAGCCTGCATGCCCTCTATATGCACCAGCTCCACAAGCAGCAGACCCAGGCTGAACCAGAGCGGCATGTGTGGCACCGCCGGGAAAGCGATGAGAATGGGGAGAGTGCCCCTGAAGAGGGGGGAGAGAGCAACCGGGCCTCCCAACCTATCCCCCGCTCTGCCAGCTATCCTTGTGCTGTACCCCGGCCTGGGGCACCCGAGACCACTGCCCTGCACGGAGGTTTCCAGAGGCGGTATGGAGGCATCACAGATCCTGGCACAGTACCCCGGGCGCCCTCTCACTTCTCCCGGCTGCCCCTCGGAGGGTGGGCTGAAGATGGGCAGCCAGCATCAAGGCATCCTGAGCCTGTGCCTGAGGAAGGCTCGGAAGATGAGCTTCCCCCTCAGGTGCACAAGGTATAG

Related Sequences

XP_004864595.1 Protein

Atg9a PREDICTED: autophagy-related protein 9A [Heterocephalus glaber]

Length: 839 aa      View alignments
>XP_004864595.1
MAQFDTEYQRLEASYSDSPPGEEDLLVHVAEGSKSPWHHIENLDLFFSRVYNLHQKNGFTCMLIGEIFELMQFLFVVAFTTFLVSCVDYDILFANKMVNHSLHPTEPVKVTLPDAFLPAQVCSARIQENGSLITILVIAGVFWIHRLIKFIYNICCYWEIHSFYLHALRIPMSALPYCTWQEVQARIVQTQKEHQICIHKRELTELDIYHRILRFQNYMVALVNKSLLPLRFRLPGLGEVVFFTRGLKYNFELILFWGPGSLFLNEWSLKAEYKRGGQRLELAQRLSNRILWIGIANFLLCPLILIWQILYAFFSYAEVLKREPGALGARCWSLYGRCYLRHFNELEHELQSRLNRGYKPASKYMNCFLSPLLTLLAKNGAFFAGSILAVLIALTIYDEDVLAVEHVLTTVTLLGVTVTVCRSFIPDQHMVFCPEQLLRVILAHIHYMPDHWQGNAHRSQTRDEFAQLFQYKAVFILEELLSPIVTPLILIFCLRPRALEIIDFFRNFTVEVVGVGDTCSFAQMDVRQHGHPQWLSGGQTEASVYQQAEDGKTELSLMHFAITNPGWQPPRESTAFLGFLKEQVQRDGAAAGLAQGGLLPENALFTSIQSLQSETEPLSLIANVVAGSSCRGPPLPRDLQGSRHRAEVASALRSFSPLQPGQAPTGRVPSTMTGSGVDARTASSGSSVWEGQLQSLVLSEYASTEMSLHALYMHQLHKQQTQAEPERHVWHRRESDENGESAPEEGGESNRASQPIPRSASYPCAVPRPGAPETTALHGGFQRRYGGITDPGTVPRAPSHFSRLPLGGWAEDGQPASRHPEPVPEEGSEDELPPQVHKV