Details from NCBI annotation

Gene Symbol Ptprn
Gene Name protein tyrosine phosphatase, receptor type, N, transcript variant X1
Entrez Gene ID 101718650

Database interlinks

Part of NW_004624823.1 (Scaffold)

For more information consult the page for NW_004624823.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PTPRN ENSCPOG00000004612 (Guinea pig)

Gene Details

protein tyrosine phosphatase, receptor type, N

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004157, Guinea pig)

Protein Percentage 92.52%
CDS Percentage 91.15%
Ka/Ks Ratio 0.14849 (Ka = 0.0402, Ks = 0.2705)

PTPRN ENSG00000054356 (Human)

Gene Details

protein tyrosine phosphatase, receptor type, N

External Links

Gene Match (Ensembl Protein ID: ENSP00000295718, Human)

Protein Percentage 90.89%
CDS Percentage 89.83%
Ka/Ks Ratio 0.14837 (Ka = 0.0477, Ks = 0.3215)

Ptprn ENSMUSG00000026204 (Mouse)

Gene Details

protein tyrosine phosphatase, receptor type, N

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000027404, Mouse)

Protein Percentage 87.49%
CDS Percentage 85.68%
Ka/Ks Ratio 0.14039 (Ka = 0.0693, Ks = 0.4939)

Ptprn ENSRNOG00000019587 (Rat)

Gene Details

protein tyrosine phosphatase, receptor type, N (Ptprn), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000026654, Rat)

Protein Percentage 87.9%
CDS Percentage 85.68%
Ka/Ks Ratio 0.13134 (Ka = 0.0666, Ks = 0.5071)

Genome Location

Sequence Coding sequence

Length: 3039 bp    Location: 5710654..5728821   Strand: +
>XM_004864532.1
ATGCGGCGCCCGCGTCGGCGTGGAAGCCCCGGGGGATCTGGGGGTCTCCGGGTGCTCTTCTGCCTCCTGCTGCTGAGCAGCCGCCCAGGGGGCTGCAGCGCCATTAGTGCCCACGGCTGTCTGTTTGACCGCAAACTCTGCTCTCACCTCGAAGTCTGTATTCAGGATGGCTTGTTTGGACAGTGCCAGGTGGGAGTGGGGCAGGCCCGGCCCCTTTTGCAAGTCACCTCCCCAGTTCTCCAACGCTTACAAGCTGTGCTTCGACAACTCATGTCCCAAGGATTGTCCTGGCATGATGACCTCACCCAGTATGTGATCTCCCAGGAGATGGAGCGCATCCCCAGGCTAAGACCCCCTGAGACCCGTCAGAGGGACAGATCTGGCTTGATGCCCAGGAGACCTGTTCCTGCTGGAGAGTTGCTTTTACAGGGCATCCCCACAGGCTCCGCCCCTGCTGCTCAGGGGCTTCCTCGACCTCCAGTCGGTGGAGGTGGACCTGGGACCGGCTCCTCCCTGTCCTCTCTGCAAGCTGAGCTGCTGCCCTCTCTCTTGGAGCATCTGCTGCTGCCCCCACAGCCTCCCCACCCTGCCCTGAGTTATGAGCCTGCCTTGCTGCAGCCCTACCTGTTCCACCAGTTTGGCTCCCGAGATGGCTCCCGAAGCTCAGAGAGCCCCCCAGGAATGGTCAGTGTTGGGCCTCTGCCCAAGGCCGAAGCTCCTTCCCTCTTCAGCAGAACTGCCTCCAAAGGCATGTTTGGAGCCCACCCTGGCCACTCCTATGGGGACTTGCCAGGGCCCTCACCTGCTCAACTTTTCCAGGACTCAGGGCTGCTCTACCTGGCCCAGGAGTTGCCAGTGCCTGGCAGGGCCAGGGCACCAATGCTGCCAGAACAAGGGAGCAGCAGTCGGGCAGAGGACTCCTCAGAGGGCTATGAGGAGGGACTAGGGGGTCCTGGGGAAAAGTCCCCTTCTCCAGCAGAGCAGCCAGCAGACGTGACTCTGCGACTGGCCGCTGTGCTGGCGGGGTATGGGGTGGAGCTACGACAGCTGACTCCTGAGCAGCTCTCCACCCTCTTGACCATACTGCAGCTGCTGCCCAAGGGTTCAGGAAGAAATCCAGGAGGAGTGGTGAATGTTGGAGCCGATATCAAGAAAACAGTGGAGGAGCAAGCACAGGGTGGAGACACACCAGAGCCTCCACCTCCCATACCCTCCCTTCCTGGACACCCCACTGCCAACCCCACCTCCAGTAAAGTCCAGCCAGTGCTGAGCCCAGGCCCCTCTGAGCCCCTCAAGGCTGCCAGTCCCTCGGCCACACTCATCCTGCTGGAGAAGAAAAGTCCACTGGGCCAGAGCCAGCCCACAGTGGTGGGACAGCCTTCAGCTCAGCCATCAGCAGAGGAGTACGGCTACATCGTCACTGACCAGAAACCCCTGAGCCTGGCTGTAGGAGTGAAGCTGCTGGAGATCCTGGCTGAGCATGTGCACATGTCCTCGGGCAACTTTATCAACATCAGTGTGGTGGGACCAGCCCTCACCTTCCGCATCCGGCACAATGAGCAGAACCTGTCTTTGGCAGATGTCACCCAGCAAGCTGGGCTGGTGAAGTCTGAACTGGAAGCACAGACAGGGTTCCAGATCTTGCAGACAGGAGTGGGACAGAGGGAGGAGGCAGCTGCAGTCCTTTTCCGACCAGCCCACAGCACCTCTCCCATGCGCTCCGTGCTGCTTACTCTGGTGGCCCTGGCAGGTGTCGCTGGGCTGCTAGTGGCTTTGGCAGTGGCTCTGTGTGTGCGCCAGCATTCTCGGCAGCGGGACAAGGAGCGCTTGGCAGCTCTGGGGCCTGAGGGGGCCCATGGTGACACTACCTTTGAGTACCAGGACCTGTGCCGCCAGCACATGGCTACAAAGTCCCTGTTCAACCGGGCAGAGGGCCCACCTGAGCCTTCACGGGTGAGCAGCGTGTCCTCGCAGTTCAGCGATGCGGCCCAGGCCAGCCCCAGCTCCCACAGCAGCACGCCGTCCTGGTGTGAGGAGCCTGCCCAGGCCAATATGGACATCTCCACAGGACATATGATTCTGGCATACATGGAGGACCACCTGCGGAACCGGGACCGCCTGGCCAAGGAGTGGCAGGCCCTGTGCGCCTACCAAGCAGAGCCGAACACCTGTGCCATCGCCCAAGGAGAGGGCAACATCAAGAAGAACCGCCATCCTGACTTCCTGCCATATGACCATGCCCGCATCAAGCTAAAGGCAGAGAGCAGCCCTTCTCGAAGTGACTACATCAACGCCAGCCCCATTATTGAGCATGACCCTCGGATGCCAGCCTACATAGCCACCCAGGGACCGCTGTCCCATACCATCGCAGACTTCTGGCAGATGGTGTGGGAGAATGGCTGCACTATCATCGTCATGCTGACCCCACTAGTGGAGGATGGCGTCAAGCAGTGTGACCGCTACTGGCCAGATGAGGGCTCCTCCCTGTACCATGTATATGAGGTGAACCTCGTGTCCGAACACATCTGGTGCGAAGACTTCCTGGTGCGCAGCTTCTACTTGAAGAACGTGCAGACGCAGGAGACGCGCACGCTCACGCAGTTCCACTTCCTCAGCTGGCCGGCAGAGGGCACCCCGGCCTCCACCCGGCCGCTGCTGGATTTCCGCAGGAAGGTGAACAAGTGTTACCGGGGCCGCTCCTGCCCCATCATCGTGCACTGCAGTGATGGTGCAGGAAGGACTGGCACCTACATCCTCATCGACATGGTACTGAACCGCATGGCAAAAGGCCTTGCCCCATCTCCAAGCTGCCCACCACAGGATGCACCAAGCTTTCTGGGTGCTGTCCTCCTCCGGACACCCCTGAACAGCCCACATCCCGCCCCATCTCCAGGAGTGAAGGAGATTGACATTGCTGCCACCCTGGAGCATGTCCGTGACCAGCGTCCTGGCCTCGTCCACTCTAAGGACCAGTTTGAATTTGCCCTGACGGCTGTGGCAGAGGAGGTGAACGCCATCCTCAAAGCCCTGCCCCAGTGA

Related Sequences

XP_004864589.1 Protein

Ptprn PREDICTED: receptor-type tyrosine-protein phosphatase-like N isoform X1 [Heterocephalus glaber]

Length: 1012 aa      View alignments
>XP_004864589.1
MRRPRRRGSPGGSGGLRVLFCLLLLSSRPGGCSAISAHGCLFDRKLCSHLEVCIQDGLFGQCQVGVGQARPLLQVTSPVLQRLQAVLRQLMSQGLSWHDDLTQYVISQEMERIPRLRPPETRQRDRSGLMPRRPVPAGELLLQGIPTGSAPAAQGLPRPPVGGGGPGTGSSLSSLQAELLPSLLEHLLLPPQPPHPALSYEPALLQPYLFHQFGSRDGSRSSESPPGMVSVGPLPKAEAPSLFSRTASKGMFGAHPGHSYGDLPGPSPAQLFQDSGLLYLAQELPVPGRARAPMLPEQGSSSRAEDSSEGYEEGLGGPGEKSPSPAEQPADVTLRLAAVLAGYGVELRQLTPEQLSTLLTILQLLPKGSGRNPGGVVNVGADIKKTVEEQAQGGDTPEPPPPIPSLPGHPTANPTSSKVQPVLSPGPSEPLKAASPSATLILLEKKSPLGQSQPTVVGQPSAQPSAEEYGYIVTDQKPLSLAVGVKLLEILAEHVHMSSGNFINISVVGPALTFRIRHNEQNLSLADVTQQAGLVKSELEAQTGFQILQTGVGQREEAAAVLFRPAHSTSPMRSVLLTLVALAGVAGLLVALAVALCVRQHSRQRDKERLAALGPEGAHGDTTFEYQDLCRQHMATKSLFNRAEGPPEPSRVSSVSSQFSDAAQASPSSHSSTPSWCEEPAQANMDISTGHMILAYMEDHLRNRDRLAKEWQALCAYQAEPNTCAIAQGEGNIKKNRHPDFLPYDHARIKLKAESSPSRSDYINASPIIEHDPRMPAYIATQGPLSHTIADFWQMVWENGCTIIVMLTPLVEDGVKQCDRYWPDEGSSLYHVYEVNLVSEHIWCEDFLVRSFYLKNVQTQETRTLTQFHFLSWPAEGTPASTRPLLDFRRKVNKCYRGRSCPIIVHCSDGAGRTGTYILIDMVLNRMAKGLAPSPSCPPQDAPSFLGAVLLRTPLNSPHPAPSPGVKEIDIAATLEHVRDQRPGLVHSKDQFEFALTAVAEEVNAILKALPQ