Details from NCBI annotation

Gene Symbol Chpf
Gene Name chondroitin polymerizing factor, transcript variant X3
Entrez Gene ID 101707555

Database interlinks

Part of NW_004624823.1 (Scaffold)

For more information consult the page for NW_004624823.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CHPF ENSCPOG00000024521 (Guinea pig)

Gene Details

chondroitin polymerizing factor

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000018100, Guinea pig)

Protein Percentage 95.31%
CDS Percentage 91.69%
Ka/Ks Ratio 0.10478 (Ka = 0.0283, Ks = 0.2703)

CHPF ENSG00000123989 (Human)

Gene Details

chondroitin polymerizing factor

External Links

Gene Match (Ensembl Protein ID: ENSP00000243776, Human)

Protein Percentage 95.06%
CDS Percentage 90.08%
Ka/Ks Ratio 0.05829 (Ka = 0.0252, Ks = 0.4324)

Chpf ENSMUSG00000032997 (Mouse)

Gene Details

chondroitin polymerizing factor

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000078199, Mouse)

Protein Percentage 93.72%
CDS Percentage 86.87%
Ka/Ks Ratio 0.05076 (Ka = 0.0321, Ks = 0.6332)

Chpf ENSRNOG00000020038 (Rat)

Gene Details

chondroitin polymerizing factor (Chpf), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000027165, Rat)

Protein Percentage 93.32%
CDS Percentage 86.96%
Ka/Ks Ratio 0.05872 (Ka = 0.0345, Ks = 0.5871)

Genome Location

Sequence Coding sequence

Length: 2250 bp    Location: 5518332..5523005   Strand: +
>XM_004864494.1
ATGCGGGCATCGCTGCTGCTGTCTGTGCTGAGGCCCGCGGGGCCCGTGGCCGTGGGCATCTCCCTGGGCTTCACCCTGAGCCTGCTCAGCGTCACCTGGGTGGAGGAGCCGTGCGGCCCAGGGCCGCCCCAGCCCGGAGACTCTGAGCTGCAGCCGCACGGCAACACCAACAACTGGGAGCCGCGTGTCTTGCCCTACCACCCGGCAAAGCCCGGCCAGGCCGCCAAGAAGGCCGTCAGGACTCGATACATCAGCACAGAGCTGGGCATCAGGCAGAGGCTGCTGGTGGCGGTGCTGACCTCACAGGCCACGTTGGCCACGCTGGGTGTGGCTGTGAACCGAACGCTGGGGCACCGACTAGAGCGCGTGGTGTTCCTGACAGGCTCGAGGGGCCGCCGGACACCATCTGGCATGGCACTGGTGACGCTGGGCGAAGAGCGGCCCATCGGGCACCTGCATCTGGCGCTGCGCCACCTGCTGGAGCAGCACGGTGACGACTTTGACTGGTTCTTCCTAGTGCCTGATGCCACCTACACCGAGGCTCACGGACTGGCACGCCTAACTGGCCGCCTCAGCCTGGCCTCAGCTGCCCACCTGTATCTAGGCCGGCCCCAGGACTTCATCGGCGGAGAGGCCACCCAAGGCCGCTATTGCCACGGAGGCTTTGGGGTACTGCTGTCGCGCACCCTGCTCCAGCAGCTGCGCCCCCACCTGGAAGGCTGCCGAAATGACATCGTCAGTGCACGCCCTGACGAGTGGCTGGGACGCTGCATTATAGATGCCACCGGGGTGGGCTGCACTGGTGACCACGAGGGGGTGCACTATAACTATCTGGAGCTGAGTCCTGGGGAGTCTGTACAGGAAGGGGATCCTCGCTTCCGAAGTGCCTTGACAGCCCATCCTGTGCGTGACCCTGTGCACATGTACCAGCTGCACAAGGCTTTTGCCAGGGCTGAGCTGGAACGCACATACCAGGAGATCCAGGAGTTGCAGTGGGAGATCCAGAACACCAGCCGTCTGGCTGCTGATGGAGACCGTGCTGCCACCTGGCCCGTGGGCATCCCAGCACCATCCCGCCCTGCCTCCCGCTTTGAGGTCCTGCGCTGGGACTACTTCACAGAGCAGCATGCTTTCTCCTGTGCTGATGGCTCACCTCGCTGCCCACTTCGTGGGGCTGATCGAGCCGATGTAGCTGATGTCCTGGGGGCAGCCCTGGAAGAGCTCAATCGCCGCTACCACCCAGCCCTGCGACTCCAGAAGCAGCAGTTGGTTAATGGCTACCGACGCTTCGATCCAGCCCGGGGTATGGAGTACACACTGGACTTGCAGCTGGAGGCACTGACCCCTCAGGGTGGCCGCAGGCCCCTCACCCGCCGGGTTCAGCTGCTCCGGCCGCTGAGCCGAGTGGAGATCTTGCCTGTGCCCTATGTCACAGAGGCCTCACGTCTCACTGTGCTGCTGCCTCTGGCTGCGACTGAGCGTGACCTGGCCCCTAACTTCCTGGAGGCCTTTGCCACTGCAGCCCTGGAGCCTGGTGATGCAGCAGCCCTGACTTTGTTACTACTGTATGAACCACGCCAGGCCCAGCGGGCAGCCCATGCAGATGTCTTTGCACCCGTCAAGGCCCATGTGGCAGAGTTAGAGAGGCGTTTTCCTGGGGCCCGGGTGCCCTGGCTCAGTGTACAAACAGCTGCACCCTCTCCACTGCGCCTCATGGATCTACTCTCCAAGAAGCACCCGCTGGACACACTATTCCTGCTGGCCGGGCCAGACACGGTGCTCACACCTGAATTCCTGAATCGCTGCCGCATGCACGCCATCTCTGGCTGGCAGGCTTTCTTTCCCATGCACTTCCAGGCCTTCCACCCGGCCGTGGCTCCACCACAGGGACCCTGGCCACCAGAGCTGGGCCGCGACACAGGCCGCTTTGATCGCCAGACGGCCAGCGAGGCCTGTTTCTACAACTCCGATTATGTGGCTGCTCGAGGGCAGCTGGCAGCAGCCTCGGAGCAGGAGGAGGAGCTGCTGGAAAGCCTGGATGTGTATGAGCTATTCCTGCGCTTCTCTAGCCTGCACGTGCTGCGGGCAGTGGAGCCAGCGCTGCTGCAGCGCTACCGGGCCCAGTGGTGCAGCGCTCTGCTCAGTGAGGACCTGTACCACCGCTGCCGCCAGAGCATGCTCGAGGGCCTTGGCTCCCGAACCCAGCTCGCAATGGTGCTCTTTGAGCAGGAGCAGGGCAACAGCACCTGA

Related Sequences

XP_004864551.1 Protein

Chpf PREDICTED: chondroitin sulfate synthase 2 isoform X3 [Heterocephalus glaber]

Length: 749 aa      View alignments
>XP_004864551.1
MRASLLLSVLRPAGPVAVGISLGFTLSLLSVTWVEEPCGPGPPQPGDSELQPHGNTNNWEPRVLPYHPAKPGQAAKKAVRTRYISTELGIRQRLLVAVLTSQATLATLGVAVNRTLGHRLERVVFLTGSRGRRTPSGMALVTLGEERPIGHLHLALRHLLEQHGDDFDWFFLVPDATYTEAHGLARLTGRLSLASAAHLYLGRPQDFIGGEATQGRYCHGGFGVLLSRTLLQQLRPHLEGCRNDIVSARPDEWLGRCIIDATGVGCTGDHEGVHYNYLELSPGESVQEGDPRFRSALTAHPVRDPVHMYQLHKAFARAELERTYQEIQELQWEIQNTSRLAADGDRAATWPVGIPAPSRPASRFEVLRWDYFTEQHAFSCADGSPRCPLRGADRADVADVLGAALEELNRRYHPALRLQKQQLVNGYRRFDPARGMEYTLDLQLEALTPQGGRRPLTRRVQLLRPLSRVEILPVPYVTEASRLTVLLPLAATERDLAPNFLEAFATAALEPGDAAALTLLLLYEPRQAQRAAHADVFAPVKAHVAELERRFPGARVPWLSVQTAAPSPLRLMDLLSKKHPLDTLFLLAGPDTVLTPEFLNRCRMHAISGWQAFFPMHFQAFHPAVAPPQGPWPPELGRDTGRFDRQTASEACFYNSDYVAARGQLAAASEQEEELLESLDVYELFLRFSSLHVLRAVEPALLQRYRAQWCSALLSEDLYHRCRQSMLEGLGSRTQLAMVLFEQEQGNST