Details from NCBI annotation

Gene Symbol Pax3
Gene Name paired box 3, transcript variant X1
Entrez Gene ID 101702856

Database interlinks

Part of NW_004624823.1 (Scaffold)

For more information consult the page for NW_004624823.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PAX3 ENSCPOG00000006276 (Guinea pig)

Gene Details

paired box 3

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005658, Guinea pig)

Protein Percentage 99.17%
CDS Percentage 95.25%
Ka/Ks Ratio 0.01672 (Ka = 0.0037, Ks = 0.2188)

PAX3 ENSG00000135903 (Human)

Gene Details

paired box 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000375921, Human)

Protein Percentage 98.97%
CDS Percentage 93.8%
Ka/Ks Ratio 0.01558 (Ka = 0.0046, Ks = 0.2954)

Pax3 ENSMUSG00000004872 (Mouse)

Gene Details

paired box gene 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000004994, Mouse)

Protein Percentage 97.73%
CDS Percentage 92.08%
Ka/Ks Ratio 0.02834 (Ka = 0.0103, Ks = 0.365)

Pax3 ENSRNOG00000013670 (Rat)

Gene Details

paired box 3 (Pax3), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000018652, Rat)

Protein Percentage 98.14%
CDS Percentage 90.98%
Ka/Ks Ratio 0.01848 (Ka = 0.0084, Ks = 0.4565)

Genome Location

Sequence Coding sequence

Length: 1455 bp    Location: 2871162..2961880   Strand: +
>XM_004864479.1
ATGACCACGCTGGCCGGCGCAGTGCCCAGGATGATGCGGCCCGGCCCGGGGCAGAACTACCCACGCAGCGGCTTCCCGCTGGAAGTATCCACCCCACTTGGCCAGGGCCGGGTCAACCAGCTCGGAGGGGTCTTTATCAACGGCAGGCCGCTGCCCAACCACATCCGCCACAAGATCGTGGAGATGGCCCACCACGGCATTCGGCCCTGCGTCATCTCCCGCCAGCTGCGCGTCTCCCACGGCTGCGTCTCTAAGATCCTGTGCAGGTACCAGGAAACGGGCTCCATCCGTCCTGGTGCCATTGGCGGCAGCAAGCCCAAGCAGGTAACAACGCCTGACGTGGAGAAGAAAATTGAGGAGTACAAAAGAGAGAACCCGGGCATGTTCAGCTGGGAGATCAGAGACAAATTGCTCAAGGACTCGGTCTGTGATCGAAACACTGTGCCCTCAGTGAGTTCCATCAGCCGCATCCTGAGGAGTAAATTCGGGAAAGGCGAAGACGAGGAGGCGGATCTGGAGAGGAAGGAGGCAGAGGAAAGCGAGAAGAAGGCGAAACACAGTATCGACGGCATCCTGAGCGAGCGAGGCTCAGCACCCCAGTCCGACGAAGGCTCTGACATTGACTCTGAACCAGATTTACCGCTAAAGAGGAAGCAGCGCCGGAGCCGGACCACCTTCACAGCAGAGCAGCTTGAAGAACTGGAGCGTGCTTTCGAGAGAACCCATTACCCTGACATTTATACCAGGGAGGAGCTGGCCCAGAGGGCAAAACTCACTGAGGCCCGAGTACAGGTCTGGTTTAGCAACCGCCGCGCACGATGGAGGAAACAAGCTGGGGCCAATCAACTCATGGCTTTCAACCATCTCCTTCCGGGGGGATTCCCTCCCACTGCCATGCCGACCCTGCCAACATACCAGCTGTCGGAGACCTCTTACCAGCCCACGTCTATTCCACAAGCTGTGTCGGATCCCAGCAGCACCGTTCACAGACCTCAGCCACTTCCTCCAAGCACCGTACACCAAAGCACTATTCCTTCAAACCCAGACAGCAGCTCTGCCTACTGCCTCCCCAGCACCAGGCATGGATTTTCCAGCTATACAGACAGCTTTGTGCCTCCGTCGGGGCCCTCCAACCCCATGAACCCCGCCATTGGCAATGGCCTTTCACCTCAGGTAATGGGACTCCTGACCAACCATGGTGGGGTGCCTCATCAGCCCCAGACGGATTACGCACTCTCCCCTCTCACTGGGGGCCTGGAACCCACCACCACGGTGTCTGCCAGCTGCAGTCAGAGACTAGACCACATGAAGAGCTTGGACAGTCTGCCAACATCTCAGTCCTACTGTCCACCCACCTATAGTACCACAGGCTACAGTATGGACCCCGTTACAGGCTACCAATATGGGCAATATGGACAAAGTGCCTTTCATTATCTCAAGCCAGATATTGCATAA

Related Sequences

XP_004864536.1 Protein

Pax3 PREDICTED: paired box protein Pax-3 isoform X1 [Heterocephalus glaber]

Length: 484 aa      View alignments
>XP_004864536.1
MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEEYKRENPGMFSWEIRDKLLKDSVCDRNTVPSVSSISRILRSKFGKGEDEEADLERKEAEESEKKAKHSIDGILSERGSAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLLPGGFPPTAMPTLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPSTRHGFSSYTDSFVPPSGPSNPMNPAIGNGLSPQVMGLLTNHGGVPHQPQTDYALSPLTGGLEPTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQSAFHYLKPDIA