Details from NCBI annotation

Gene Symbol Scg2
Gene Name secretogranin II, transcript variant X3
Entrez Gene ID 101699180

Database interlinks

Part of NW_004624823.1 (Scaffold)

For more information consult the page for NW_004624823.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SGII ENSCPOG00000009801 (Guinea pig)

Gene Details

Uncharacterized protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008798, Guinea pig)

Protein Percentage 86.57%
CDS Percentage 89.66%
Ka/Ks Ratio 0.34761 (Ka = 0.0775, Ks = 0.2229)

SCG2 ENSG00000171951 (Human)

Gene Details

secretogranin II

External Links

Gene Match (Ensembl Protein ID: ENSP00000304133, Human)

Protein Percentage 85.06%
CDS Percentage 87.01%
Ka/Ks Ratio 0.20673 (Ka = 0.0817, Ks = 0.3951)

Scg2 ENSMUSG00000050711 (Mouse)

Gene Details

secretogranin II

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000062556, Mouse)

Protein Percentage 79.22%
CDS Percentage 83.28%
Ka/Ks Ratio 0.21957 (Ka = 0.1152, Ks = 0.5246)

Scg2 ENSRNOG00000015055 (Rat)

Gene Details

secretogranin II (Scg2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000020219, Rat)

Protein Percentage 78.64%
CDS Percentage 82.2%
Ka/Ks Ratio 0.19305 (Ka = 0.1182, Ks = 0.6125)

Genome Location

Sequence Coding sequence

Length: 1860 bp    Location: 1656224..1661779   Strand: +
>XM_004864471.1
ATGGCAAAAGCTAAGACCCACCGGCTTGGAGCAGCCCTGTCTCTTATCCATTTAATTTTCCTCATCTCTGGAGCTGAAGCAGCTTCATTTCAGCGTAACCAGCTGTTTCAGAAAGAACCAGACCTCAGACTGGAAAATCTCCAAAGGTTCCCCAGTCCTGAAATGATCAAAGCTTTGGAGTACATAGAAAAACTCCGGCAACAAGCTCACAAAGAAGAAAGCAGCCCAGACTACAGTCCCTACCAAGATATCTCGGTTCCCCTTCCACAGAAAGAATTTGGAGAGGAAAGTCACTTGCCAGAGAATTCAAGAGATTCACTGAGTGAAGATGAGTGGATCAGGATAATACTCGAAGCTTTGAGACAGGCTGAAAATGAGCCTCAATCTGCACCAAAAGAAAGCAAGTCTTACGCCTTAAATTCTGAAAAGAGCTTTCCAGGGGACATGACTGATGATTATGAGACACAACAGTGGCCAGGGAGAAAGCTCAAGCACATGCAGTTCCCTCCCATGTATGAGGAGAATATCAGGGACAACCCCTTCAAGCGCACAAACGAAATAGTAGAGGAGCAATATACACCTCAAAGTCTTGCTACCCTGGAGTCAGTCTTCCAAGAGCTGGGGAAACTGACAAGACCAAACAACCAGAAGCGTGAGAGGGCTGATGAGGAACAGAAACTCTATGCAGATGATGAAGAAGATGTCTACAAGGGCAACAACATTGCTTATGAAGATGTAGTTGGGGGAGAAGATTGGAGTCCAGTAGAGGAGAAAATAGAGAGCCAAACCCAGGAAGAGGTGAGAGACAGCAAAGAGAGTACAGAAAAAAATGAACAGATCAATGAAGAAATGAAACGTTCGGGTCAGTTGGGCCTGCAGGAAGATCTCCGCAAGGAGAGTAAAGACCAACAGCTCTCAGAGAATGTCTCCAAAGTCATTGCCTATTTGCAAAGGTTGGTGAGTGCTGTGGGAGGTGGGAGGTCCCAGAATGGGCAAAATGGGGAATGGGCAGTCAGGCTTCTTGAGAAACCACTTGATTCTCAGTCTATTTATCAGCTTATTGAAATCTCTAGGAGTTTACAGATACCCCCTGAAGACTTAATTGATATGCTCAAGACTGGGGAGAAGTCAGGTGGGCCAGCGGAGCCAGTGCAGGAGCTTGACCTTCCTGTTGACCTAGATGACATCTCAGAGGCTGACTTAGACCGTCCAGACCTGTTCCCAAATAAGATGCTCTCCAAGAGTGGGTACCCCAAAGCCCCCAGTCGTGCTGTGACAGAAGCCTTACCAGATGGGCTCAGTGTTGAGGATATTTTAAATCTTTTAGGGGTGGAGAGTACAGCAAATCAGAAACCTCCATATTTTCCCAATCACTATAGCCAACAGAAGGTTCCCCTGAGGCTCCCCTACAGTCCCGGGAGATCCAGAGTGAACCAGCTCCCCAAAGCTGCCTGGATGCCAGAGGCTGAAAACGGACAAGTGGCTTATGAAGACCTGAATGACAAGGATCAAGAATTAGGAGAGTACTTGGCCAGGATACTAGTGAAATACCCTGAGATCATTAATTCAAACCAGATGAAGCGAGTGTCCAGTCCAGGCTCATCTGAAGATGACCTCCAGGAAGAGGAACAGCTAGAGCAGGCCACGAAAGAGCAACTGGGACAGGGCAGCTCGCAGGAGACTGACCAACTGGCACCAGGGAGCAAAAGGTTGGCTGCGGGACCCCCGAAAAATGATGACACCCCAAACAGACAGTACTTGGATGAAGATCTGCTGATGAAAGTGCTGGAATACCTTAACCAAGAAAAGGCAGAAAAGGGAAGGGAGCATATTGCCAAGAGGGCCATGGAAAATATGTAA

Related Sequences

XP_004864528.1 Protein

Scg2 PREDICTED: secretogranin-2 isoform X3 [Heterocephalus glaber]

Length: 619 aa      View alignments
>XP_004864528.1
MAKAKTHRLGAALSLIHLIFLISGAEAASFQRNQLFQKEPDLRLENLQRFPSPEMIKALEYIEKLRQQAHKEESSPDYSPYQDISVPLPQKEFGEESHLPENSRDSLSEDEWIRIILEALRQAENEPQSAPKESKSYALNSEKSFPGDMTDDYETQQWPGRKLKHMQFPPMYEENIRDNPFKRTNEIVEEQYTPQSLATLESVFQELGKLTRPNNQKRERADEEQKLYADDEEDVYKGNNIAYEDVVGGEDWSPVEEKIESQTQEEVRDSKESTEKNEQINEEMKRSGQLGLQEDLRKESKDQQLSENVSKVIAYLQRLVSAVGGGRSQNGQNGEWAVRLLEKPLDSQSIYQLIEISRSLQIPPEDLIDMLKTGEKSGGPAEPVQELDLPVDLDDISEADLDRPDLFPNKMLSKSGYPKAPSRAVTEALPDGLSVEDILNLLGVESTANQKPPYFPNHYSQQKVPLRLPYSPGRSRVNQLPKAAWMPEAENGQVAYEDLNDKDQELGEYLARILVKYPEIINSNQMKRVSSPGSSEDDLQEEEQLEQATKEQLGQGSSQETDQLAPGSKRLAAGPPKNDDTPNRQYLDEDLLMKVLEYLNQEKAEKGREHIAKRAMENM