Details from NCBI annotation

Gene Symbol Hacl1
Gene Name 2-hydroxyacyl-CoA lyase 1, transcript variant X6
Entrez Gene ID 101706829

Database interlinks

Part of NW_004624822.1 (Scaffold)

For more information consult the page for NW_004624822.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

HACL1 ENSCPOG00000024203 (Guinea pig)

Gene Details

2-hydroxyacyl-CoA lyase 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000019014, Guinea pig)

Protein Percentage 90.14%
CDS Percentage 92.68%
Ka/Ks Ratio 0.33938 (Ka = 0.0528, Ks = 0.1556)

HACL1 ENSG00000131373 (Human)

Gene Details

2-hydroxyacyl-CoA lyase 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000323811, Human)

Protein Percentage 88.06%
CDS Percentage 89.56%
Ka/Ks Ratio 0.22922 (Ka = 0.0635, Ks = 0.2771)

Hacl1 ENSMUSG00000021884 (Mouse)

Gene Details

2-hydroxyacyl-CoA lyase 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000022437, Mouse)

Protein Percentage 86.57%
CDS Percentage 84.91%
Ka/Ks Ratio 0.14761 (Ka = 0.0764, Ks = 0.5173)

Hacl1 ENSRNOG00000019630 (Rat)

Gene Details

2-hydroxyacyl-CoA lyase 1 (Hacl1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000026588, Rat)

Protein Percentage 85.54%
CDS Percentage 84.91%
Ka/Ks Ratio 0.17162 (Ka = 0.0833, Ks = 0.4852)

Genome Location

Sequence Coding sequence

Length: 1746 bp    Location: 5079588..5126083   Strand: +
>XM_004864413.1
ATGCCGGAAAGTCACTTCGTGGCGCCCAGCGACAGAAGCGCAGAGCAGGTGTCGGGGGCTAAAGTCGTGGCGCAGGCCCTGAAGGCGCAGGATGTGCGGTACGTGTTTGGCGTCGTGGGCATCCCGGTGACCGAAATCGCCCTTGCCGCCCAGGAGCTGGGCATCAGGTACATCGGGATGAGGAACGAGCAGGCGGCTTCTTATGCTGCCTCTGCAGTTGGATATCTGACTGGCAGGCCAGGAGTGTGCCTTGTTGTTTCTGGCCCAGGTCTCATCCATGCCTTGGCTGGTATGGCCAATGCAAACATGAACTGTTGGCCCCTGATTGTGATTGGTGGTTCCTCTGAAAGAAATCAAGAAACAATGGGAGCCTTTCAGGAGTTTCCTCAGGTTGAAGCTTGTAGATTATATAGCAAGTTCTCTGCTCGGCCAACCAGCATAGAAGGTATTCCCTCTGTCATTGAAAAGGCTGTGAGAATCAGTATCTATGGTCGTCCAGGTGCTTGTTATGTTGATATACCTGCAGATTTTGTGACCGTCCAGGTGAATGTGAACTCTATAAAGTATAAAGAGTGCTGCATGCCACCTCCTGTTACCATGGCAGAAGCCTCTGCTGTTTGTCTGGCAGCATCTGTTATTAGGAGTGCCAAACAGCCCCTTCTTGTCATCGGGAAAGGTGCTGCTTATGCACATGCAGAGGAAAATATCAGGAAATTGGTGGAGCAATGTAAATTGCCATTTTTGCCCACTCCTATGGGCAAGGGTGTTGTCCCTGACAACCACGCAAACTGTGTAAGTGCAGCCAGATCCAGAGCTTTGCAGTTTGCTGATGTGATTGTCTTATTTGGTGCCAGACTAAATTGGATTTTACATTTTGGACTGCCTCCAAGATATCAGCCAGATGTGAAGTTTATCCAGATTGATATCTGTGCAGAAGAATTGGGAAATAATGTAAAGCCTGCTGTGACTCTGCTAGGAGACATAAATGCTGTTGCTAAACAGCTTTTAGAACAATTTGATAAGATACCGTGGCAGTATCCTCCAGAAAGCAAGTGGTGGAAAAGATTGAGAGAAAAAATGAAGAGCAATGAAGCTGCATCCAAGGAATTAGCTTCCAAAATATCTCTGCCTATGAATTATTATACAGTGTTCTACCATGTTCAAGAACAATTGCCCAAAGACTGTTTTTTGGTAAGTGAAGGAGCAAATACCATGGACATTGGACGCACTATGCTTCAAAACTACCTTCCTCGTCACAGGCTTGATGCTGGTACTTTCGGAACAATGGGAGTCGGTTTGGGATTTGCTATTGCAGCTGCTCTGGTAGCTAAAGATAGAAGCCCCGGGCAGCGGGTCATCTGTGTGGAGGGAGACAGTGCATTCGGGTTTTCTGGCATGGAAATGGAAACCATCTGCAGGTATAACTTGCCAATCATAGTCTTGGTGGTGAACAATAATGGAGTTTACCAAGGTTTTGATGCAGATACTTGGAAAGAAATAGTAAAATTTCAAGATCCTGTCACAGTGGCCCCTCCAATGTGTCTCCTGCCAAACTCACATTATGAGCAGGTCATGACTGCATTTGGAGGCAAAGGATATTTTGTACAAACACCAGAAGAACTCCAAAAATCCCTGAAGCAGACCTTGGAAGACACAACTAAACCTTCTCTTATCAATATCATGATTGAGCCACAAAGCACACGAAAGGCCCAGGATTTTCACTGGCTCACCCGCTCTAATATGTAA

Related Sequences

XP_004864470.1 Protein

Hacl1 PREDICTED: 2-hydroxyacyl-CoA lyase 1 isoform X6 [Heterocephalus glaber]

Length: 581 aa      View alignments
>XP_004864470.1
MPESHFVAPSDRSAEQVSGAKVVAQALKAQDVRYVFGVVGIPVTEIALAAQELGIRYIGMRNEQAASYAASAVGYLTGRPGVCLVVSGPGLIHALAGMANANMNCWPLIVIGGSSERNQETMGAFQEFPQVEACRLYSKFSARPTSIEGIPSVIEKAVRISIYGRPGACYVDIPADFVTVQVNVNSIKYKECCMPPPVTMAEASAVCLAASVIRSAKQPLLVIGKGAAYAHAEENIRKLVEQCKLPFLPTPMGKGVVPDNHANCVSAARSRALQFADVIVLFGARLNWILHFGLPPRYQPDVKFIQIDICAEELGNNVKPAVTLLGDINAVAKQLLEQFDKIPWQYPPESKWWKRLREKMKSNEAASKELASKISLPMNYYTVFYHVQEQLPKDCFLVSEGANTMDIGRTMLQNYLPRHRLDAGTFGTMGVGLGFAIAAALVAKDRSPGQRVICVEGDSAFGFSGMEMETICRYNLPIIVLVVNNNGVYQGFDADTWKEIVKFQDPVTVAPPMCLLPNSHYEQVMTAFGGKGYFVQTPEELQKSLKQTLEDTTKPSLINIMIEPQSTRKAQDFHWLTRSNM