Sequence details NCBI ID: XM_004864392.1 (Coding sequence)

Details from NCBI annotation

Gene Symbol Nisch
Gene Name nischarin, transcript variant X1
Entrez Gene ID 101701602

Database interlinks

Part of NW_004624822.1 (Scaffold)

For more information consult the page for NW_004624822.1 (Scaffold)

Genome Location

Sequence Coding sequence

Length: 4587 bp    Location: 4763508..4725715   Strand: -
Raw sequence   
>XM_004864392.1
ATGGCGGCGGCGGCTGCGGCGGCGGAGCGCGAGGCAGAGCCGGCCAAGGAGGCGCGCGTCGTGGGCTCCGAGCTCGTAGACACGTATACGGTTTATATCATCCAGGTCACTGATGGCAGCCATGAGTGGACAGTCAAGCACCGATACAGTGACTTCCATGACCTGCATGAAAAGCTTATTGCAGAGAAAAAGATTGATAAAAATCTCCTCCCACCAAAAAAGATAATCGGGAAAAACTCAAGAAGCTTGGTGGAAAAGAGGGAGAAGGACCTGGAGGTGTACCTCCAGACTCTCCTGGCTGTCTTCCCTGGTGTGGCCCCCAGAGTGCTGGCCCACTTCTTGCATTTTCACTTCTATGAGATAAATGGCATCACTGCAGCACTGGCTGAAGAACTCTATGAAAAAGGAGAACAGCTCCTGGGGGCCGGCGAGGTCTTTGCCATTGGGCCCTTGCAGCTGTATGCAGTCACGGAGCAGCTGCAGCAGGGGAAGCCCACATGCGCCAGTGGGGACGCCAAGACTGACCTTGGGCACATCCTGGACTTCACCTGTCGCCTTAAGTACCTTAAGGTTTCTTGCACAGAAGGACCTTTTGGGTCCAGTAACATTCAAGAGCAGCTCCTGCCATTTGATCTGTCAATATTCAAATCCCTTCATCAGGTGGAGATAAGTCACTGTGATGCTAAGCACATCCGAGGACTGGTGGCCTCAAAGCCCACCTTAGCTACCCTGAGCATCCGCTTCTCAGCAACCTCAATGAAGGAAGTCCTTGTTCCTGAAGCCTCAGAATTTGATGAGTGGGAGCCAGAAGGCACAGCCCTCGAAGGCCCCGTGACTGCCATCATCCCCACATGGCAAGCGTTGACCACTCTCGACCTGAGCCACAACAAGATCTCCGAGATTGACGAGTCTGTGAAACTGATCCCAAAGATTGAGTTCCTGGACCTGAGTCACAATGGAGTGCTGGTTGTGGACAACCTGCAGCACCTGTACAACCTCGTGCACCTTGACCTGTCCTACAATAAGCTTTCCTCCTTGGAAGGCGTTCACACTAAACTGGGCAATATCAAGACCCTGAACCTGGCAGGCAACCTCCTGGAGAGTCTGAATGGCCTGCACAAGCTCTATTCTCTGGTCAACCTGGACCTCAGCAACAATAGAATTGAACAGATGGAGGAGGTCCGGAGCATAGGCAGCCTACCGTGTGTGGAGCACGTGTCCCTGCTGAACAACCCTCTAAGCATCATCCCTGACTACCGGACCAAGGTGCTGGCGCAGTTCGGAGAGCGGGCCTCTGAGGTCTGTCTGGATAGCACAGTGACCACAGAGAAGGAGCTAGACACCGTGGAAGTGCTGAAAGCAATCCAGAAGGCCAAGGATGTGAAGTCCAAACTGAACAACTCAGAGAAGAAGGTTGGTGAGGATTCCCGGCTCTCAGCTGCCCCCTTCGTCAGGCCCAGTGGCTCCCCTCCCTCCACGGCTCCCACCTCTGCCTCCCTGCCCCAGCCCATCCTTTCCAACCAAGGGGTCATGTTCGTGCAGGAGGAGGCCCTGGCCAGCAGCCTCTCATCTACCGACAGTCTGACTCCTGATGACAGGCCCATTGCCCGGGCCTGCTCAGATTCCCTGGAGTCCATCCCTGCGGGACAGGCATCTCCCGATGATTTAAGGGACGTGCCTGGAGCTGTTGGTGGTGCAAGCCCAGAGCACACGGAGCCAGAGGTGCAGGTGGTGCCTGGGTCTGGCCAGATCATCTTCCTGCCCTTTACCTGCATTGGCTACACGGCCACCAATCAGGACTTCATCCAGCGCCTGAGCACACTGATCCGCCAGGCCATCGAGCGGCAGTTGCCTGCCTGGATTGAGGCTGCCAACCAGCGAGAGGAGGGTCAGGGCGAGCAGGGTGAGGAGGACGACGACGAGGATGAGGAGGACGTTGTTGAGAACCGCTACTTTGAAATGGGGCCCCCAGACACAGAGGAAGAGGAGGGCGGCCCGGGGGAGGAGGAGGAGGAAGAGGAGGAAGAGGAGGCTGAGGAGGAGCGCCTGGCTCTGGAGTGGGCCCTGGGCGCAGATGAGGACTTCCTGCTGGAGCACATCCGCATCCTCAAGGTGCTGTGGTGCTTCCTGATTCACGTGCAGGGCAGCATCCGCCAGTTTGCCGCCTGCCTGGTGCTCACAGACTTCGGCATTGCCGTCTTCGAGATCCCACACCAGGAGTCACGAGGCAGTAGCCAGCACATCCTCTCGTCCCTGCGCTTTGTCTTCTGCTTCCCCCACGGTGACCTCACTGAGTTTGGGTTCCTCATGCCAGAGCTGTGTCTGGTGCTCAAGGTGCGCCACAGTGAGAACACGCTTTTCATCATCTCGGACGCCGCCAACTTGCAGGAGTTCCATGCCGACCTGCGCTCCTGCTTCGCCCCGCAGCACATGGCCATGCTGTGCAGCCCCATCCTCTACAGCAGCCACACCAGCCTGCAGGAGTTCCTGCGTCAGCTCCTCACCTTCTACAAGGTGGCTGGTGGCTGCCAAGAGCGCAGCCAGGGCTGCTTCCCGGTCTACCTGGTCTACAGTGACAAGCGCATGGTGCAGACAGCCGCCGGGGACTATTCGGGCAACATTGAGTGGGCCAGCTGCACGCTGTGCTCGGCCGTGCGGCGCTCCTGCTGTGCGCCCTCCGAAGCTGTCAAGTCTGCCGCCATCCCCTACTGGCTGCTGCTCACCCCGCAGCACCTCAACGTCATCAAGGCCGACTTCAACCCCATGCCCAACCGGGGCACCCACCACTGCCGCAACCGCAACAGCTTCAAACTCAGCCGTGTGCCGCTCTCTACCGTCCTGCTGGACCCCACGCGCAGCTGCACACAGCCCAGGGGTGCCTTCGCTGATGGCCATGTGCTTGAGCTGCTCGTTGGCTACCGCTTCGTCACTGCCATTTTCGTGCTGCCCCATGAGAAGTTCCACTTCCTGCGCATATACAACCAGCTTCGAGCCTCGCTGCAGGACTTGAAGACTGTGGTCATTGCCAAGACCCCCACACCTGGAACCAGATCCCAGAGCCCTCTTGTGGATGGCCAACCTGCCGAAGACAGGGCCAGATATAGGCATGACCAGCGTCCCCAGGAAGGCCCTGCAGAGGCTACAGCCGGAGCCCCGGCCCCAGCTCCAGTCCTGGCAGCCTCAGCTCCAGTCCCGGCAAATACCCTGGCTCCAGCTCCAGCCCCAGAGGAGGCCTCAGCTCCAGCTCCAACCTCAGCGGAGGCCCAAGCTCCACCTCCAGCCCCAGCAGAGGCTTCAGCTCCAGCTCTGGTCCCGGAAGAGGCTCCGATAGAGACCCCAACTCCAGCCGCAGCAGAGGCCCTGACACAAGCTGAGGCCCCTGCCCAGTACCCGAGTGAGCAGCTGATCCAGTCCACCTCAGAGGAGAACCAGATCCCCTTTCACCTGCCTGTCTGCCCTTCGCTTCAGCACATCGCCGGCCTGTCGGGCAAGGCTGTCATTGAGCTCTTCCACAGCAGCATTGCTGAGGTTGAAAACGAGGAGCTGAGGCACCTCCTCTGGTCATCAGTGGTGTTCTACCAGACCCCAGGGCTGGAGGTGACCGCCTGTGTGCTGCTGTCCACCAAGGCTGTGTACTTCGTGCTGCACGATGGCCTCCGCCGCTACTTCTCAGAGCCTCTGCAGGATTTCTGGCATCAGAAAAACACTGACTACAACAACAGCCCTTTCCACATTTCTCAGTGCTTTGTGCTCAAACTCAGCGACCTGCAGTCAGTCAATGTTGGCCTTTTTGACCAGCACTTCCGGCTGACGGGCTCCGCCCCGGCACAGGTGGTCACATGCCTGACTCGGGACAGCTACCTGACGCACTGCTTCCTCCAGCACCTCATGCTTGTGCTCTCCTCACTGGAGCGCACGCCTTCTCCTGAGCCTGCTGACAAGGACTTCTACTCAGAGTTTGGGGACAAGACCACAGGAAAGATGGAGAACTACGAGCTGATCCACTCAAGTCGTGTCAAGTTCACCTACCCCAGCGAGGAGGAAGTTGGGGACCTAACGTACATCGTGGCCCAGAAAACAACTGATCCAGAGAAAGCCCCAGCCCCCAGTATCCTGCTGTATGTACAGGCCTTCCAGGTGGACCTACCGCCACCTGGGAGCTGCCGGGGCCCACTGCGCCCCAAGACACTCCTGCTCACCAGCACGGAGATCTTTCTCCTGGATGAAGACTATATCCACTACCCACTGCCTGAGTTTGCCAAAGAGCCACCACAGAGGGACAGGTACCGGCTGGGTGATGGCCACCGTGTCCGGGACTTGGACCGAGTTCTCATGGGCTACCAGCCCTACCCACAGGCCCTTACCCTTGTCTTTGATGACATGCAGGGCCACGACCTCATGGGCAGCGTCACCCTGGACCATTTCGGAGAGATGCAGAGTGGTTCTGCCAGGGCTGGCCAGGGCCGTGAGATCCAGTGGCAGATTTTTGTCCCCAGCGCCGAGAGCCGAGAGAAGCTCATTTCACTGTTGGCCCGTCAGTGGGAGGCCCTGTGCGGCCGGGAGCTGCCTGTTGAGCTTACTGGCTAG

Related Sequences

XP_004864449.1 Protein

Nisch PREDICTED: nischarin isoform X1 [Heterocephalus glaber]

Length: 1528 aa      
>XP_004864449.1
MAAAAAAAEREAEPAKEARVVGSELVDTYTVYIIQVTDGSHEWTVKHRYSDFHDLHEKLIAEKKIDKNLLPPKKIIGKNSRSLVEKREKDLEVYLQTLLAVFPGVAPRVLAHFLHFHFYEINGITAALAEELYEKGEQLLGAGEVFAIGPLQLYAVTEQLQQGKPTCASGDAKTDLGHILDFTCRLKYLKVSCTEGPFGSSNIQEQLLPFDLSIFKSLHQVEISHCDAKHIRGLVASKPTLATLSIRFSATSMKEVLVPEASEFDEWEPEGTALEGPVTAIIPTWQALTTLDLSHNKISEIDESVKLIPKIEFLDLSHNGVLVVDNLQHLYNLVHLDLSYNKLSSLEGVHTKLGNIKTLNLAGNLLESLNGLHKLYSLVNLDLSNNRIEQMEEVRSIGSLPCVEHVSLLNNPLSIIPDYRTKVLAQFGERASEVCLDSTVTTEKELDTVEVLKAIQKAKDVKSKLNNSEKKVGEDSRLSAAPFVRPSGSPPSTAPTSASLPQPILSNQGVMFVQEEALASSLSSTDSLTPDDRPIARACSDSLESIPAGQASPDDLRDVPGAVGGASPEHTEPEVQVVPGSGQIIFLPFTCIGYTATNQDFIQRLSTLIRQAIERQLPAWIEAANQREEGQGEQGEEDDDEDEEDVVENRYFEMGPPDTEEEEGGPGEEEEEEEEEEAEEERLALEWALGADEDFLLEHIRILKVLWCFLIHVQGSIRQFAACLVLTDFGIAVFEIPHQESRGSSQHILSSLRFVFCFPHGDLTEFGFLMPELCLVLKVRHSENTLFIISDAANLQEFHADLRSCFAPQHMAMLCSPILYSSHTSLQEFLRQLLTFYKVAGGCQERSQGCFPVYLVYSDKRMVQTAAGDYSGNIEWASCTLCSAVRRSCCAPSEAVKSAAIPYWLLLTPQHLNVIKADFNPMPNRGTHHCRNRNSFKLSRVPLSTVLLDPTRSCTQPRGAFADGHVLELLVGYRFVTAIFVLPHEKFHFLRIYNQLRASLQDLKTVVIAKTPTPGTRSQSPLVDGQPAEDRARYRHDQRPQEGPAEATAGAPAPAPVLAASAPVPANTLAPAPAPEEASAPAPTSAEAQAPPPAPAEASAPALVPEEAPIETPTPAAAEALTQAEAPAQYPSEQLIQSTSEENQIPFHLPVCPSLQHIAGLSGKAVIELFHSSIAEVENEELRHLLWSSVVFYQTPGLEVTACVLLSTKAVYFVLHDGLRRYFSEPLQDFWHQKNTDYNNSPFHISQCFVLKLSDLQSVNVGLFDQHFRLTGSAPAQVVTCLTRDSYLTHCFLQHLMLVLSSLERTPSPEPADKDFYSEFGDKTTGKMENYELIHSSRVKFTYPSEEEVGDLTYIVAQKTTDPEKAPAPSILLYVQAFQVDLPPPGSCRGPLRPKTLLLTSTEIFLLDEDYIHYPLPEFAKEPPQRDRYRLGDGHRVRDLDRVLMGYQPYPQALTLVFDDMQGHDLMGSVTLDHFGEMQSGSARAGQGREIQWQIFVPSAESREKLISLLARQWEALCGRELPVELTG