Details from NCBI annotation

Gene Symbol Cacna1d
Gene Name calcium channel, voltage-dependent, L type, alpha 1D subunit, transcript variant X3
Entrez Gene ID 101714832

Database interlinks

Part of NW_004624822.1 (Scaffold)

For more information consult the page for NW_004624822.1 (Scaffold)

Genome Location

Sequence Coding sequence

Length: 6480 bp    Location: 3734216..3391452   Strand: -
>XM_004864338.1
ATGATGATGATGATGATGATGAAAAAAATGCAGCATCAACGGCAGCAGCAAGCGGACCACGCGAACGAGGCAAACTATGCAAGAGGCACCAGACTCCCTCTTTCTGGTGAAGGACCAACTCCTCAGCCGAATAGCTCCAAGCAAACTGTCCTGTCTTGGCAAGCTGCAATCGATGCTGCCAGACAGGCCAAGGCTGCCCAGACTATGAGCACTTCTGCACCTCCACCTGTAGGATCTCTCTCCCAAAGAAAACGTCAGCAATATGCCAAGAGCAAAAAACAGGGTAACTCGTCCAACAGCCGACCTGCCCGCGCCCTTTTCTGTTTATCACTCAATAATCCCATCCGAAGAGCCTGCATTAGTATAGTGGAATGGAAACCATTTGACATATTTATATTATTGGCTATTTTTGCCAATTGTGTGGCCTTAGCTATTTACATCCCATTCCCTGAAGATGATTCTAATTCAACAAATCATAACTTGGAAAAAGTAGAATATGCCTTCCTGATTATTTTTACAGTCGAGACATTTTTGAAGATTATAGCATATGGATTATTGCTACATCCAAATGCTTATGTTAGGAATGGATGGAATTTACTGGATTTTGTTATAGTAATAGTAGGATTGTTTAGTGTAATTTTGGAACAATTAACCAAAGAAACAGAAGGCGGGAACCACTCTAGTGGCAAATCAGGAGGCTTTGATGTCAAAGCCCTCCGTGCCTTTCGAGTGTTACGACCACTTCGACTAGTATCAGGAGTGCCCAGTTTACAAGTTGTCCTGAACTCCATTATAAAAGCCATGGTTCCCCTCCTTCACATAGCCCTTTTGGTATTATTTGTAATCATAATCTATGCTATTATAGGATTGGAACTTTTTATTGGAAAAATGCACAAAACATGTTTTTTTGCTGACTCAGATATCGTAGCTGAAGAGGACCCAGCTCCATGTGCGTTCTCAGGGAATGGACGCCAGTGTACTGCCAATGGCACAGAATGTAGGAGTGGCTGGGTTGGCCCAAACGGAGGCATCACCAACTTTGATAACTTTGCCTTTGCCATGCTCACTGTGTTTCAGTGTATCACCATGGAGGGCTGGACGGATGTGCTGTACTGGATGAATGATGCTATGGGATTTGAATTGCCCTGGGTGTATTTTGTCAGTCTCGTCATCTTTGGGTCATTTTTCGTACTAAATCTTGTACTTGGTGTATTGAGCGGAGAGTTCTCAAAGGAAAGAGAGAAGGCTAAAGCACGGGGAGACTTCCAGAAGCTACGGGAAAAGCAGCAGCTGGAAGAGGATCTCAAGGGCTACTTGGATTGGATCACTCAGGCAGAAGACATTGATCCTGAGAACGAGGAGGAGGGTGGAGAAGAAGGCAAACGCAATACTAGCATGCCCACCAGCGAGACTGAATCTGTGAACACAGAGAACGTGAGTGGCGAAGGCGAGACCAAGGGCTGCTGCAGACGTCTCTGTCAAGCCATCTCAAAATCCAAACTCAGCCGACGCTGGCGTCGCTGGAACCGATTCAATCGTAGAAGATGTAGGGCTGCTGTGAAGTCTGTCACATTTTACTGGCTGGTTATTGTCCTGGTGTTTCTCAACACGTTAACCATTTCCTCTGAGCACTACAATCAGCCCGGCTGGTTGACACAGATTCAAGATATTGCCAACAAAGTCCTCTTGGCCCTGTTCACCTGTGAGATGCTGATAAAAATGTACAGCTTGGGTCTCCAGGCGTATTTCGTGTCTCTTTTCAACCGGTTTGACTGCTTCGTGGTATGTGGTGGGATTACCGAGACCATCTTAGTGGAGCTGGAAATCATGTCTCCGCTGGGGATTTCCGTGTTTCGGTGTGTGCGCCTCTTAAGAATCTTCAAAGTGACCAGGCACTGGACTTCTCTCAGCAACTTGGTGGCATCCCTGTTAAACTCCATGAAGTCTATCGCTTCACTGTTGCTTTTGCTTTTTCTCTTCATTATCATCTTTTCCTTGCTTGGGATGCAGCTGTTTGGTGGGAAGTTTAATTTCGATGAAACGCAAACCAAGCGAAGCACCTTCGACAACTTTCCTCAAGCACTGCTGACCGTATTCCAGATTCTGACAGGTGAAGACTGGAATGCTGTGATGTATGACGGCATCATGGCTTATGGAGGCCCATCCTCTTCGGGAATGATTGTCTGCATCTACTTCATCATCCTCTTCATCTGTGGTAACTATATTCTACTGAATGTCTTCCTGGCCATTGCTGTAGACAACTTGGCTGATGCTGAAAGTTTGAACACTGCCCAAAAAGAGGAAGCTGAAGAAAAAGAAAGGAAAAAGATTGCCAGAAAAGAGAGCCTAGAAAATAAAAAGAACCACAAACCAGAAGTCAACCAAATAGCCAACAGTGACAACAAGGTTACAGTTGATGACTATCGAGAGGAAGATGAGGACAAGGACCCTTACCCGCCTTGTGATGTGCCAGTAGGTGAAGAGGAAGAGGAGGAGGAGGAGGATGAACCTGAAGTTCCCGCTGGTCCCCGCCCTCGCAGAATCTCAGAGTTGAACATGAAGGAGAAAATCGCCCCCATCCCTGAAGGGAGTGCTTTCTTCATTCTCAGCAAGACCAACCCGATCCGTGTGGGCTGCCACAAGCTCATCAACCACCACGTCTTCACCAACCTCATCCTCGTCTTCATCATGCTGAGCAGCGCTGCCCTGGCCGCGGAGGACCCCATCCGCAGCCACTCCTTCCGGAACACTATACTGGGTTACTTTGACTATGCTTTCACAGCCATCTTTACTGTTGAAATCCTGTTAAAGATGACGACTTTTGGAGCTTTCTTGCACAAAGGGGCTTTCTGCAGGAACTACTTCAATTTGCTGGACATGCTAGTTGTTGGTGTGTCTCTGGTGTCATTTGGGATTCAATCCAGTGCCATCTCTGTTGTGAAGATTCTGAGGGTCTTAAGGGTCTTGAGGCCCCTTAGAGCCATCAACAGAGCAAAAGGACTTAAGCACGTTGTCCAGTGCGTCTTCGTGGCCATCCGGACAATTGGCAACATCATGATCGTCACTACCCTCCTCCAGTTCATGTTTGCCTGCATTGGGGTGCAGTTGTTCAAGGGGAAGTTCTATCGCTGCACAGACGAAGCCAAAAGTAACCCTGAAGAGTGCAGAGGGCTTTTCATCCTCTACAAGGATGGAGACGTCGATAGCCCCGTGGTCCGTGAAAGGATCTGGCAAAATAGTGATTTCAACTTTGACAACGTCCTTTCTGCTATGATGGCACTCTTCACGGTCTCCACTTTTGAGGGCTGGCCTGCGTTGCTATACAAAGCCATTGACTCAAATGGAGAAAACGTTGGCCCAGTCTACAACTACCGCGTGGAGATCTCCATCTTCTTCATCATCTATATCATCATTGTCGCGTTCTTTATGATGAACATCTTTGTGGGCTTTGTCATTGTTACATTTCAGGAGCAGGGAGAAAAAGAGTATAAGAACTGTGAGCTGGACAAAAATCAGCGTCAGTGTGTCGAATACGCCTTGAAAGCACGTCCCTTGCGGAGATACATCCCCAAAAACCCCTACCAGTACAAGTTCTGGTACGTGGTAAACTCTTCGCCTTTCGAATACATGATGTTCGTCCTCATCATGCTCAACACACTCTGCTTGGCCATGCAGCACTACGAGCAGTCCAAGATGTTCAATGACGCCATGGACATTCTGAACATGGTCTTCACTGGGGTGTTCACTGTTGAAATGGTTTTGAAAGTCATTGCATTTAAGCCTAAGGGGTATTTTAGTGACGCCTGGAACACGTTTGACTCCCTCATCGTAATCGGCAGCATTATAGACGTGGCCCTCAGCGAAGCAGACCCAACTGAAAGTGACAATGTCCCTGTCCCAACTGCTACACCTGGGAACTCTGAAGAGAGCAATAGAATCTCCATCACCTTTTTCCGTCTTTTCCGAGTGATGCGACTGGTGAAGCTTCTCAGCAGGGGGGAAGGCATCCGGACATTGCTGTGGACTTTTATTAAGTCCTTCCAGGCACTCCCGTATGTCGCCCTCCTCATTGCCATGCTGTTCTTCATCTACGCCGTCATCGGCATGCAGATGTTTGGGAAAGTTGCCATGAGAGATAATAACCAGATCAACAGGAACAACAACTTCCAGACGTTTCCCCAGGCAGTGCTGCTGCTCTTCAGGTGTGCTACTGGCGAGGCTTGGCAGGAGATCATGCTGGCCTGCCTCCCAGGAAAGCTATGTGATCCCGAGTCAGACTACAACCCCGGAGAGGAGTACACATGCGGCAGCAGCTTTGCCATCGTCTATTTCATCAGCTTTTACATGCTCTGTGCGTTTCTGATCATCAATCTGTTTGTGGCTGTCATCATGGACAATTTTGACTATCTGACCCGGGACTGGTCTATTTTAGGGCCTCACCACTTAGATGAATTCAAAAGAATATGGTCAGAATATGACCCTGAGGCAAAGGGAAGGATAAAACACCTCGACGTGGTCACACTGCTCCGGCGCATCCAGCCTCCTCTGGGATTTGGGAAATTATGCCCACACCGAGTAGCGTGTAAGAGGTTAGTTGCCATGAACATGCCTCTCAACAGTGATGGAACAGTCATGTTTAACGCAACCCTGTTTGCTTTGGTCCGAACAGCTCTCAAGATCAAGACTGAAGGGAACCTGGAACAAGCTAATGAAGAACTTCGAGCTGTGATAAAGAAAATCTGGAAGAAAACCAGCATGAAACTGCTCGACCAAGTTGTCCCTCCTGCTGGTGATGATGAGGTAACCGTGGGGAAGTTCTATGCCACTTTCCTGATACAGGACTACTTTAGGAAATTCAAGAAACGGAAAGAACAAGGATTGGTGGGAAAATACCCTGCGAAGAACACCACAATTGCCCTACAGGCAGGATTAAGGACACTGCATGACATTGGGCCAGAAATCCGGCGTGCTATATCCTGTGATTTGCAAGATGATGAGCCAGAGGAAAAGAGAGAAGAAGAAGATGTATTCAAAAGAAATGGTGCCCTGCTTGGAAACCATGTCAATCATGTTAATAGTGATAGGAGAGATTCCCTTCAGCAGACCAATACCACCCACCGTCCCCTGCATGTCCAAAGGCCTTCAATTCCACCTGCGAGTGATACTGAGAAACCGCTGTTTCCTCCAGCAGGAAATTCGGTGTGTCATAGCCGTCCTAACCGTAATTCCGTAGGAAAGCAAGTTCCCACCTCAACAAATGCCAATCTCAACAATGCCAACATGTCCAAAGCTGCCCATGGAAAGCGACCCAGCACTGGGGACCTTGAGCATGTGTCTGAAAATGGGCATCATTCCTCCCACAAGCACGACCGGGAGCCTCCAAGATGGTCCAGTATTAAAAGAACGCGCTATTATGAAATGTACATTAGGTCCGACTCAGGGGATGAGCAGTTCCCAACTATTTGCCGAGAGGACCCAGAGATACACGGGTACTTCAGGGACCCCCGCTGCTTGGGGGAGCAGGAGTACTTCAGTAGCGAGGAGTGCTATGAGGAAGACAGCTCTCCCACCTGGAGCAGGCAAAACTACAGCTGCTACAACAGGTACCTGGGCGGCACCACGGACTTCGAGAGGCCCCGAGGCTACCACCCACCCCAAGGCTGCTCGGAGGACGATGACTCGCCTGTCTGCTATGACTCTCGGAGATCTCCCCGGAGACGCCTACTACCTCCCACCCCCCCACCCCACCGGAGATCCTCCTTCAACTTCGAATGTCTGCGCCGGCAGAGCAGCCAGGAGGAGGCCCCGCCTTCCCCCACCCTGCCGCACCGCACGGCCCTGCCTCTGCATCTGATGCAGCAGCAGATCATGGCAGTTGCAGGCCTCGACTCAAGTAGAGCCCCGAAGTACTCACCGAGCCACTCAACCCGGTCGTGGGCCACCCCTCCAGCAACTCCTCCATACAGGGACTGGACACCGTGCTATACCCCCCTGATCCAGGTGGAGCGGTCAGAGTCCCTGGACCAGGTCAACGGCAGCCTGCCCTCCCTGCACCGCAGCTCCTGGTACACGGACGAGCCTGACATCTCCTATCGGACTTTCACACCAGCCAGCCTGACTGTCCCCAGCAGATTCCGTAACAAGAACAGCGACAAGCAGAGGAGTGCAGACAGCTTGGTGGAGGCAGTCCTGATATCCGAAGGCTTAGGACGCTATGCAAGGGACCCAAAATTTGTGTCAGCGACTAAACATGAAATCGCTGATGCCTGTGACCTAACCATTGATGAGATGGAGAGTGCAGCCAGCACCCTGCTCAACGGGAGCATGGGTCCTCGGGCCAGTGGGGATGTGGGCCTTGTCTCTCACCGGCAGGACTACGAGCTCCAGGAGTTTGGGCCCGGCTACAGTGACGAGGAGCCAGACCCTGGGCGAGATGAGGAGGACCTGGCTGATGAAATGATCTGTATCACCACCTTGTAG

Related Sequences

XP_004864395.1 Protein

Cacna1d PREDICTED: voltage-dependent L-type calcium channel subunit alpha-1D isoform X3 [Heterocephalus glaber]

Length: 2159 aa     
>XP_004864395.1
MMMMMMMKKMQHQRQQQADHANEANYARGTRLPLSGEGPTPQPNSSKQTVLSWQAAIDAARQAKAAQTMSTSAPPPVGSLSQRKRQQYAKSKKQGNSSNSRPARALFCLSLNNPIRRACISIVEWKPFDIFILLAIFANCVALAIYIPFPEDDSNSTNHNLEKVEYAFLIIFTVETFLKIIAYGLLLHPNAYVRNGWNLLDFVIVIVGLFSVILEQLTKETEGGNHSSGKSGGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFIGKMHKTCFFADSDIVAEEDPAPCAFSGNGRQCTANGTECRSGWVGPNGGITNFDNFAFAMLTVFQCITMEGWTDVLYWMNDAMGFELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLKGYLDWITQAEDIDPENEEEGGEEGKRNTSMPTSETESVNTENVSGEGETKGCCRRLCQAISKSKLSRRWRRWNRFNRRRCRAAVKSVTFYWLVIVLVFLNTLTISSEHYNQPGWLTQIQDIANKVLLALFTCEMLIKMYSLGLQAYFVSLFNRFDCFVVCGGITETILVELEIMSPLGISVFRCVRLLRIFKVTRHWTSLSNLVASLLNSMKSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDETQTKRSTFDNFPQALLTVFQILTGEDWNAVMYDGIMAYGGPSSSGMIVCIYFIILFICGNYILLNVFLAIAVDNLADAESLNTAQKEEAEEKERKKIARKESLENKKNHKPEVNQIANSDNKVTVDDYREEDEDKDPYPPCDVPVGEEEEEEEEDEPEVPAGPRPRRISELNMKEKIAPIPEGSAFFILSKTNPIRVGCHKLINHHVFTNLILVFIMLSSAALAAEDPIRSHSFRNTILGYFDYAFTAIFTVEILLKMTTFGAFLHKGAFCRNYFNLLDMLVVGVSLVSFGIQSSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKGKFYRCTDEAKSNPEECRGLFILYKDGDVDSPVVRERIWQNSDFNFDNVLSAMMALFTVSTFEGWPALLYKAIDSNGENVGPVYNYRVEISIFFIIYIIIVAFFMMNIFVGFVIVTFQEQGEKEYKNCELDKNQRQCVEYALKARPLRRYIPKNPYQYKFWYVVNSSPFEYMMFVLIMLNTLCLAMQHYEQSKMFNDAMDILNMVFTGVFTVEMVLKVIAFKPKGYFSDAWNTFDSLIVIGSIIDVALSEADPTESDNVPVPTATPGNSEESNRISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIAMLFFIYAVIGMQMFGKVAMRDNNQINRNNNFQTFPQAVLLLFRCATGEAWQEIMLACLPGKLCDPESDYNPGEEYTCGSSFAIVYFISFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWSEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVAMNMPLNSDGTVMFNATLFALVRTALKIKTEGNLEQANEELRAVIKKIWKKTSMKLLDQVVPPAGDDEVTVGKFYATFLIQDYFRKFKKRKEQGLVGKYPAKNTTIALQAGLRTLHDIGPEIRRAISCDLQDDEPEEKREEEDVFKRNGALLGNHVNHVNSDRRDSLQQTNTTHRPLHVQRPSIPPASDTEKPLFPPAGNSVCHSRPNRNSVGKQVPTSTNANLNNANMSKAAHGKRPSTGDLEHVSENGHHSSHKHDREPPRWSSIKRTRYYEMYIRSDSGDEQFPTICREDPEIHGYFRDPRCLGEQEYFSSEECYEEDSSPTWSRQNYSCYNRYLGGTTDFERPRGYHPPQGCSEDDDSPVCYDSRRSPRRRLLPPTPPPHRRSSFNFECLRRQSSQEEAPPSPTLPHRTALPLHLMQQQIMAVAGLDSSRAPKYSPSHSTRSWATPPATPPYRDWTPCYTPLIQVERSESLDQVNGSLPSLHRSSWYTDEPDISYRTFTPASLTVPSRFRNKNSDKQRSADSLVEAVLISEGLGRYARDPKFVSATKHEIADACDLTIDEMESAASTLLNGSMGPRASGDVGLVSHRQDYELQEFGPGYSDEEPDPGRDEEDLADEMICITTL