Details from NCBI annotation

Gene Symbol Lrtm1
Gene Name leucine-rich repeats and transmembrane domains 1
Entrez Gene ID 101712233

Database interlinks

Part of NW_004624822.1 (Scaffold)

For more information consult the page for NW_004624822.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LRTM1 ENSCPOG00000009233 (Guinea pig)

Gene Details

leucine-rich repeats and transmembrane domains 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008289, Guinea pig)

Protein Percentage 88.29%
CDS Percentage 89.59%
Ka/Ks Ratio 0.31762 (Ka = 0.0714, Ks = 0.2247)

LRTM1 ENSG00000144771 (Human)

Gene Details

leucine-rich repeats and transmembrane domains 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000273286, Human)

Protein Percentage 76.81%
CDS Percentage 82.9%
Ka/Ks Ratio 0.36112 (Ka = 0.1389, Ks = 0.3845)

Lrtm1 ENSMUSG00000045776 (Mouse)

Gene Details

leucine-rich repeats and transmembrane domains 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000061828, Mouse)

Protein Percentage 65.7%
CDS Percentage 71.61%
Ka/Ks Ratio 0.33487 (Ka = 0.2627, Ks = 0.7846)

Genome Location

Sequence Coding sequence

Length: 1041 bp    Location: 2344081..2353796   Strand: +
>XM_004864330.1
ATGGAAGGTGAGCTGCTGCTGCTTTTAAGCGTGATCTTCCTGCTCCAGGGGACATGTGGGTGCCCAGAGAAGTGCTTCTGTCACTCATCTTCAAATTCTGTAGACTGCAGCCACCAAGGTCTGGCTGAAATCCCTCCTGATCTGCCTCCTGAGACGCTAACACTGCTCTTGCAAGATAACCAGATACGCCAGCTTCCTGCTCTTGCATTTAGGACAGTACCACGGCTCAAGACCTTAAATCTGTCCAACAATTCCCTTTCAGAACTGGCCCCTGAAGCCTTCCATGGACTTCAGCACTTGCAGGTTTTAAATCTAACCCACAATTCCCTGCTTTCCCTAGAAAGCAGACTTTTCCATTCTCTCCCACAGTTGCGGGAGCTTGATTTGTCGTCCAACAACATAAGCCACCTTCCCAAGTCCCTGGGTGAACCTTGGGAGAATCTAACTGTATTTGCAGTGCAACAAAACCAGCTTCAGCACCTCAGTCGTGAGCTCCTAGAATCCATGCCCAGGGTGAGGCTGTTACTGCTCCAGAACAACCTCTGGAAATGCAATCGCCACCTGCTTGGCCTTAAACTCTGGCTAGAGACATTTATCTATGAAGGGGGAAGAACAGACGGCGTCATCTGTGAGTCACCTGACACGTGGAAGGGAAAGGATCTCCTTAAAATCCCCCATGAGCTGTACCAGCCCTGCCCTCCTCCTCCTCCTCCAGAGTTGGTGTCTTCCCAGGCTGGGCAGCACGAATCTGAACATGGGAAGGTCCCCAAGCTTCCTGAGGATCACAGCTTGGGCCAGCAGCAAGTCTCCGGGTGTGAGGTCAAACCCAAACCAAGGCCTGCCAACCTGCGCCACGCCATGGCCACTGTGGTCATCACCGGGGTGGTGTGTGGGATTGTGTGTCTCATGATGCTGGTGGCTGCCATCTACGGCTGCACCTATGCAGCCATCACAGCACAGGGCCATGGACGACCCTCAGCTCAAACCAGTGAGTCTGGGAAGGCAGAAGGAAAAGAGCCGTTTGACAGCTTGCCAGCCTGA

Related Sequences

XP_004864387.1 Protein

Lrtm1 PREDICTED: leucine-rich repeat and transmembrane domain-containing protein 1 [Heterocephalus glaber]

Length: 346 aa     
>XP_004864387.1
MEGELLLLLSVIFLLQGTCGCPEKCFCHSSSNSVDCSHQGLAEIPPDLPPETLTLLLQDNQIRQLPALAFRTVPRLKTLNLSNNSLSELAPEAFHGLQHLQVLNLTHNSLLSLESRLFHSLPQLRELDLSSNNISHLPKSLGEPWENLTVFAVQQNQLQHLSRELLESMPRVRLLLLQNNLWKCNRHLLGLKLWLETFIYEGGRTDGVICESPDTWKGKDLLKIPHELYQPCPPPPPPELVSSQAGQHESEHGKVPKLPEDHSLGQQQVSGCEVKPKPRPANLRHAMATVVITGVVCGIVCLMMLVAAIYGCTYAAITAQGHGRPSAQTSESGKAEGKEPFDSLPA