Sequence details NCBI ID: XM_004864316.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ccdc66
Gene Name coiled-coil domain containing 66
Entrez Gene ID 101706340

Database interlinks

Part of NW_004624822.1 (Scaffold)

For more information consult the page for NW_004624822.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CCDC66 ENSCPOG00000009499 (Guinea pig)

Gene Details

coiled-coil domain containing 66

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008526, Guinea pig)

Protein Percentage 77.83%
CDS Percentage 86.18%
Ka/Ks Ratio 0.49023 (Ka = 0.1298, Ks = 0.2648)

CCDC66 ENSG00000180376 (Human)

Gene Details

coiled-coil domain containing 66

External Links

Gene Match (Ensembl Protein ID: ENSP00000378167, Human)

Protein Percentage 74.89%
CDS Percentage 84.79%
Ka/Ks Ratio 0.52099 (Ka = 0.1497, Ks = 0.2873)

Ccdc66 ENSMUSG00000046753 (Mouse)

Gene Details

coiled-coil domain containing 66

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000052546, Mouse)

Protein Percentage 67.6%
CDS Percentage 76.93%
Ka/Ks Ratio 0.32923 (Ka = 0.2135, Ks = 0.6485)

Ccdc66 ENSRNOG00000028380 (Rat)

Gene Details

coiled-coil domain containing 66

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000036334, Rat)

Protein Percentage 64.14%
CDS Percentage 73.63%
Ka/Ks Ratio 0.3427 (Ka = 0.2593, Ks = 0.7567)

Genome Location

Sequence Coding sequence

Length: 2868 bp    Location: 658495..626559   Strand: -
Raw sequence   
>XM_004864316.1
ATGAACTTGGGAGATGGTTTAAAGCTTGAAACTGAATTACTGAATGGAAAAACCAAGCTAATACTATCTCCGTATGAACATAAGTCAAAAATTTCTGTGAAGATGGGCAATAAAACCAAGATTGGAAAGTGTCCCGTAAGAACAAAACAACCTAGAAACAGTGTAAAGTCAACACAAAATACTTTTATTGGGAGTGAAGAACTTTTGCAAAAGAAGACAATTGGTTTGGAAACTTCACAGGCAAGAGGTGAAAAGAGTAGAATGACACTCTCACCCAGTAAGGATTTATGTAAGCCATATACAGATGAAGACTGTCTTCTTATCCAAAAAGAAATTTTACCTGCAGTCCCTAATATACAGAAAACTAGAAACACCACAAATACACCTCTAGGAACTAAACAGAAGACTTGCAAAAAGCACATCACAGCTGAAACTATGAATAGCAGTTTGGTGTGTCTTACACAAGAGCAACTACGACAAACTTTGATGACTGTAAACGAAGGAAAGGGATCTGTTTCCATGACAGAGAATGAAAAGGAGGAAGAAACAAGTCAGGATAGACTACATTTAAACAATATTCCTAATCAGCCCAAGAAAGAGAACATTATAGGATTACTCCAAAAAACTGATGCTGTTTCATTTGTTCCAAATGAAAATAAATGTGTCGTTAATAAAATCCAGGAGGCATCTAAACAGTCTGAGCAGAAAGTCATCACAGAGAATGAGTGGAAACCAGCTGACATTTTCAGTACTCTTGGTGAAAGGGAACGTGATAGAAGTTCATTGGAAGCAAAAAAAGCCCAGTGGAGGAAAGAGCTAGATGAACAGGTTGCTTTAAAGAAGAAAGAGAAAGAAGCTTCTGAAAAACAGAATAATTCTTGGAAAAAATCTGAAAATGATAAAATAACATTGGAAAAACTTCAGATTCTTGACCAATTTAGGGTATGTCGAAATCAAGTGTTTTGTTTAGCAATTAGGCAAGAGAAAGAAAAGAGATACATACAGGAGTTGAATGAACACATAGAAGATGACAGCAAAGAAAAAGAGGAAAGATTTACATATTCAAAGATAACAGCTTTTGACAAAGAACATGACAGATGGGCAGTGCATTTTGATTCATTCAAGAGTCATCCTGGTTCTCAATCTCAGCTGTCCTCTCAATCTCAATCAACACACAACCAACCAGAGTACTTCAGTGTCTCTCCTGATACTCGGGAGCTGGCTGATTTTGGCAGCGTTTCTACACCTACAATTGGAAGCCAGCTTGAACCTTCAGAGGAGGAGCAGGTAGCAAAGCCTGTTAGGGATGTGGCTGTGGCAAACAGTCAGAAAACAAACTTTCTTCGTTCTATGACTGCTCTGTTGGACCCGGCACAGATTGAAGAACGGGACAGACGACGACAAAAACAGTTAGAACATCAGAAAGCAATCACTGCTCAGGTGGAAGAGAAACGCAAGAGGAAGCAATTGGAGGAAGAGAAAAGAAAGAAGGAAGAGCAGGAAGAGGAACGTCGCTTGACACGGGAACAAGAAGAGATGCAGAAACAGAATGAAGAAGATATACTTAAGCAAAAACAAAAGGAAGAAATCATGACTCTCAAGACAAATGAGCTATTCCAGGCAATGCAGAGAGCACAGGAGCTGGCTCAAAGACTGAAACAAGAACAAAGAATCCGAGAACTGGATCAAAAGGGACATGACACTTCCAGATTGGTTAAAAATCTTGGTGGTAATGTGGAATATAATGCATCCACTAACATTTCAAATTCAAGATATGACTTTGATGAAGCTGGTGGTAAAACAAATAGATATATCAGTTCTACTACGACTTCTCCCAAAAAGGACACCGGTGTGCAAACAGATGACTTAAATACAGGAATATTCACCAGTACAGAACCACACTGTGGACCAATAATAGAGACGGAAGTTATATATTGTTCATCTCCCGAGATTTCTGTAGAATTTAATGGTCAGTTTAACAAAGACAAGCAAGAACTTGGTGAGGATAAAGGAGCCAACTTAGAAAAAGAAAACAATTGGTATGACCAGTGTAATTACTTCATAAGAACAGAGAAGAAACAAATACAACATACAAAGAAATGTCCTAAAAGGCCTGATTGGAATATAAATAAGCCTCTCAAAAGGTATGTTCCAGCATCAGAAAAGTACCCTAAACAGCTTCAAAAGCAGAGAGAAGAAAAGAAGGTAAGGCGGCAGATGGAACTGCTTCATTTGGTAGAGAGAAATAATCCTGAACACCTCTGTCAAAATAGAAGCACTTCGCCAGAAGTTCTTCAGTCATTCCATCAAGAAACTGAGTCAAAGATCGGGTGGCATCTTTTCAAAAAGGAAGAACCATCTCTGAAAATTCATTCATTCAGCAAGGAAAGGTTTCAGTCATCATCACCAGTTCCACCTACGAAAAGCAGAACACAACAGACTCAGACTACTGCATTACACCTACCACTAAAAAATAGTAGCTATGAAAGAGAGAGTCTGATGCTAGGCAGTAGTCAAACAGAATTATCAGCTGGGATGCCTGAATTGCCCCATTTTATTCCCTACGTTCGAACAAATGAGATTTATTACCTGGATCCAGATGCACCATTGTCTAGGCCTTCAACTGAGGACCCTCAGTACCAAAATAATTCTTATTGTGACCAAGAACAACAGCTGTGCAACTCTGACCTTGTCAAGGATCCACTTCTTAATCCTAACTTGCTGAAAAACAGGGATCAACAGCAAGCAATCCTTAAGGGACTGTCAGAATTGAGACAGGGCCTTCTCCAGAAGCAAAAGGAGTTGGAAACTAATCTCATGCCTTTAGCTGCAAATCAAGAAAAGAATTTTAATTCATTTAAAATTTAG

Related Sequences

XP_004864373.1 Protein

Ccdc66 PREDICTED: coiled-coil domain-containing protein 66 [Heterocephalus glaber]

Length: 955 aa      View alignments
>XP_004864373.1
MNLGDGLKLETELLNGKTKLILSPYEHKSKISVKMGNKTKIGKCPVRTKQPRNSVKSTQNTFIGSEELLQKKTIGLETSQARGEKSRMTLSPSKDLCKPYTDEDCLLIQKEILPAVPNIQKTRNTTNTPLGTKQKTCKKHITAETMNSSLVCLTQEQLRQTLMTVNEGKGSVSMTENEKEEETSQDRLHLNNIPNQPKKENIIGLLQKTDAVSFVPNENKCVVNKIQEASKQSEQKVITENEWKPADIFSTLGERERDRSSLEAKKAQWRKELDEQVALKKKEKEASEKQNNSWKKSENDKITLEKLQILDQFRVCRNQVFCLAIRQEKEKRYIQELNEHIEDDSKEKEERFTYSKITAFDKEHDRWAVHFDSFKSHPGSQSQLSSQSQSTHNQPEYFSVSPDTRELADFGSVSTPTIGSQLEPSEEEQVAKPVRDVAVANSQKTNFLRSMTALLDPAQIEERDRRRQKQLEHQKAITAQVEEKRKRKQLEEEKRKKEEQEEERRLTREQEEMQKQNEEDILKQKQKEEIMTLKTNELFQAMQRAQELAQRLKQEQRIRELDQKGHDTSRLVKNLGGNVEYNASTNISNSRYDFDEAGGKTNRYISSTTTSPKKDTGVQTDDLNTGIFTSTEPHCGPIIETEVIYCSSPEISVEFNGQFNKDKQELGEDKGANLEKENNWYDQCNYFIRTEKKQIQHTKKCPKRPDWNINKPLKRYVPASEKYPKQLQKQREEKKVRRQMELLHLVERNNPEHLCQNRSTSPEVLQSFHQETESKIGWHLFKKEEPSLKIHSFSKERFQSSSPVPPTKSRTQQTQTTALHLPLKNSSYERESLMLGSSQTELSAGMPELPHFIPYVRTNEIYYLDPDAPLSRPSTEDPQYQNNSYCDQEQQLCNSDLVKDPLLNPNLLKNRDQQQAILKGLSELRQGLLQKQKELETNLMPLAANQEKNFNSFKI