Details from NCBI annotation

Gene Symbol Trim58
Gene Name tripartite motif containing 58, transcript variant X2
Entrez Gene ID 101703341

Database interlinks

Part of NW_004624821.1 (Scaffold)

For more information consult the page for NW_004624821.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TRIM58 ENSCPOG00000014306 (Guinea pig)

Gene Details

tripartite motif containing 58

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012888, Guinea pig)

Protein Percentage 72.57%
CDS Percentage 80.17%
Ka/Ks Ratio 0.21298 (Ka = 0.1607, Ks = 0.7548)

TRIM58 ENSG00000162722 (Human)

Gene Details

tripartite motif containing 58

External Links

Gene Match (Ensembl Protein ID: ENSP00000355437, Human)

Protein Percentage 61.08%
CDS Percentage 68.94%
Ka/Ks Ratio 0.12521 (Ka = 0.2648, Ks = 2.1152)

Trim58 ENSMUSG00000037124 (Mouse)

Gene Details

tripartite motif-containing 58

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000074594, Mouse)

Protein Percentage 61.08%
CDS Percentage 67.43%
Ka/Ks Ratio 0.09006 (Ka = 0.2754, Ks = 3.0579)

Trim58 ENSRNOG00000026430 (Rat)

Gene Details

tripartite motif-containing 58 (Trim58), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000049077, Rat)

Protein Percentage 60.25%
CDS Percentage 66.18%
Ka/Ks Ratio 0.07538 (Ka = 0.2852, Ks = 3.7842)

Genome Location

Sequence Coding sequence

Length: 1473 bp    Location: 8908687..8898671   Strand: -
>XM_004864281.1
ATGGCATCAGGCCCCGGCGCGCAGCTGCAAGAGGACGCGCGCTGTGCCGTGTGCCTGGACCTGCTGCGCGCGCCCGTGACCGTGGACTGCGGGCACAGCTTCTGCGCCGCCTGCGTGCGCGCGCTGCTGGACGCGCAGCCCCGCTCCCCTGCGCGCGCGCCCCGCTGCCCGCAGTGCCGCGCTGATGTCCGGCCCGAGGGCGTGCGGCCCAACCGGCAGCTAGCGGCGCTGGTGGATGGTGTGCGGCGCCTGGCGCTGGCCGAGGGCGCCGCGGGGGATGCGGAGGGGGCGCGGTGCGCGCTGCATGGCCAGGAGGTTGCGCTCTTCTGCCCCCAGGACGGGCGCGTGCTGTGCAGGGTCTGCGCCGCCGGGGACGAGCACCAGGGACACCACCCCACCGGGCTGCGGGAGGCCATGGAGGAGCACAGGGTGAAGCTGCAGCAGGCCCTGGAGACGGTGCAGAAAGAGATGGAGGAGGCATCGGCACAGGAGGTGAATGTGGGGAAGAAGACTGTGGTGTGGAAGGAGAAGGTGGAGGTGCAGCGGCAGCGGTTCCGGTTGGAGTTTGAGAAGTACCGTGGCTTTCTGGCCCTGGAGGAACGGCTGCAGCAGCGGTGGCTGGAGGAAGAAGAGCGGGCGACCCTGCAGAGGCTGCGGGACAGTAGGGCGAGGCTGGCCCAGCAAAGCAAGGCCCTGAAGGAGCTGGTTGAGGAGCTGGAGCAGAGGAGCCAGCGCCCGGCCCTGGGTCTGCTGGAGGTGAGTAGGGGGCGGAGATGCACGGCTGTCACACGGCTGGAATGTGAGACCACCCCGCTGGAGCTGAGGACAGTGTGCTGCATCCCTGGGATGAGAGACATGATGAGGAGGTTCCAAGTGGACATGAAGCTGGACCCCAGCACAGCGCACCCCAGCCTGCTGCTGACGGCTGACCTGCGCTCCGTGCGGGAAGGCGAGCTCTGGAGGGATGTGCCAGGGGACCCGAAGAGGTTCGACACCTGGCCTTGCGTGCTGGGCCTGCCGAGCTTCTCCTCTGGCCGGCACTACTGGGAAGTGGCAGTGATCAAGGGCGCTGAGTGGGGCCTGGGCGTGTGCCAGGACACAGCGCCGCGCAGGGGCGAGGCGGCCCCAACCCCCAAGCTTGGCGTGTGGGCGCTGTGGCTGCTGCGGGGCACCGAGTACCTGCTGCTGGGCTCCCCGTGTGCACCACCTCCACCGCCATCTGGGCTGTGCCGCGTGGGGCTCTTCCTGGACTGTGAGGCCGGGGAGGTCTCCTTCTATGATGCCCACAGTGGCTCCCACATCTACACTTTTGGCCACCTCTTCCCTGGCTGCCTGCGGCCCTACTTCTTTGTCTGTGACAAGAACCCCCTGGTTCTGCCCACTGTGGCTGAGGCCAAGTCTGAAAGTGAGGCCTGCAGGGCTCCCATGGGCCTAGGAGCTGAGGGTCCTGATGGCCCTGAGTTGCCTTCCTGA

Related Sequences

XP_004864338.1 Protein

Trim58 PREDICTED: tripartite motif-containing protein 58-like isoform X2 [Heterocephalus glaber]

Length: 490 aa      View alignments
>XP_004864338.1
MASGPGAQLQEDARCAVCLDLLRAPVTVDCGHSFCAACVRALLDAQPRSPARAPRCPQCRADVRPEGVRPNRQLAALVDGVRRLALAEGAAGDAEGARCALHGQEVALFCPQDGRVLCRVCAAGDEHQGHHPTGLREAMEEHRVKLQQALETVQKEMEEASAQEVNVGKKTVVWKEKVEVQRQRFRLEFEKYRGFLALEERLQQRWLEEEERATLQRLRDSRARLAQQSKALKELVEELEQRSQRPALGLLEVSRGRRCTAVTRLECETTPLELRTVCCIPGMRDMMRRFQVDMKLDPSTAHPSLLLTADLRSVREGELWRDVPGDPKRFDTWPCVLGLPSFSSGRHYWEVAVIKGAEWGLGVCQDTAPRRGEAAPTPKLGVWALWLLRGTEYLLLGSPCAPPPPPSGLCRVGLFLDCEAGEVSFYDAHSGSHIYTFGHLFPGCLRPYFFVCDKNPLVLPTVAEAKSESEACRAPMGLGAEGPDGPELPS