Details from NCBI annotation

Gene Symbol Sgol1
Gene Name shugoshin-like 1 (S. pombe), transcript variant X2
Entrez Gene ID 101698945

Database interlinks

Part of NW_004624821.1 (Scaffold)

For more information consult the page for NW_004624821.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SGOL1 ENSCPOG00000008318 (Guinea pig)

Gene Details

shugoshin-like 1 (S. pombe)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000018899, Guinea pig)

Protein Percentage 80.74%
CDS Percentage 86.9%
Ka/Ks Ratio 0.3873 (Ka = 0.1116, Ks = 0.2882)

SGOL1 ENSG00000129810 (Human)

Gene Details

shugoshin-like 1 (S. pombe)

External Links

Gene Match (Ensembl Protein ID: ENSP00000263753, Human)

Protein Percentage 73.33%
CDS Percentage 83.81%
Ka/Ks Ratio 0.50541 (Ka = 0.158, Ks = 0.3127)

Sgol1 ENSMUSG00000023940 (Mouse)

Gene Details

shugoshin-like 1 (S. pombe)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000024736, Mouse)

Protein Percentage 53.68%
CDS Percentage 70.16%
Ka/Ks Ratio 0.44264 (Ka = 0.3313, Ks = 0.7485)

Sgol1 ENSRNOG00000022499 (Rat)

Gene Details

Protein Sgol1

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000061236, Rat)

Protein Percentage 54.51%
CDS Percentage 68.24%
Ka/Ks Ratio 0.42726 (Ka = 0.3588, Ks = 0.8398)

Genome Location

Sequence Coding sequence

Length: 1590 bp    Location: 5514626..5498343   Strand: -
>XM_004864274.1
ATGGCCAAGGAGAGGTGCCAGAAAAAGTCCTTTCAAGATAGTCTTGAAGACATAAAGAAGCGAATGAAAGAGAAAAGGAATAAAAACTTGGCAGAGATTGGCAAACGCAGGTCCTTTATACCTGCACCATGCCAAGTGATTACCAACACTTGTACACTGCTGAAAAATTACCAAGACAACAACAGAATGTTAGTTTTAGCTTTGGAAAATGAAAAATCCAAAGTGAGAGAAGCCCAAGATATCATCCTACAGCTAAGAAAGGAATGTTACTACCTTGCATGTCAGCTATATGCACTGAAAGAAAAACTTACTTCACAACAAACAGAAGATACTGCTCAGAACCAGGAAGTATGTCTCTCAGGGACGGATTCCAATAATGATGACAACCCCAGGGATTTGTTTGCAAAGGATTTACCGCAAGTTCCTTTTCAAGAAACTGACCTTCCAGGACAAGAAGAATCATCCCAAATAAAAGAGCAAATACTTTCTACTCCTCAAGACACAGTGGGATCTGACTTTGATTCAGGGGAGGCTAAGTCTACTGCTGATGTCTTACCTAGAACTGTATCTCTCCGTCGCCATGTAAAGGAACATTTTAATAGTCTAAGTCAATTCGATACCTTGGATAATTTTGAAACAAGTTATTTGGAAGGGCAATCTTTCGAACTGGAAAGCATCAGGTATGTGGCCCCAGTAGTAAACATGCACATACCAAACAATGAAGAAAAAAATGTCTATCAATGGAACACAGACAAAATTAATTTATCACCAAGGCTGACTGAACCAGGAAAGTTTACCAAAATGGAAGAAGTCATTTTAGAATCTAAAGCTGAAAAAAAAACTCAACATAGAGGTATACAAGTAAGAAAAAAAGAGAAAAGAAAAGCTAACAGAAGAAAATCTAAGTCTACATCAAAGTATAAAGGGAACAAAAGTAAAAATCAAAAAACTGTTTGCTCCCCAAAATTGGATGAATCTGTCAGTTCGAGCGATGCTTACAATTTTAATTTGGAAGAGGGTATTCATCTCACTCCATTCCGACAAAAAACCAACACTGATTCTAACAGAGAAAAAAACAACAGTACGTCTGAAGTGAGCACCTTTGAATCCAGCAGTTCTGGAGACGATTCTGATGATCTCTATGTGCCCCATTGCAAGAACACTCAGAATCTTACAAGCACATCAGATAGACCAGTCACCCGGCCTCGATCTAAAAGAGCGCTAAGCCTCACAGATGAGCAAGAGATGGAGGTTTCTAAGCCAACAAAAACTCCTACTAGTGTACCACCTAAGACTCGCCCATCACCTCCATCACCTCATTGTAGACTGAAGGATATCACCAATGTTCCCTTGTTTCCCGAAATAAAAATCAGGAGACTTTCTCTTTCTCCAGAAAAGAATAAAGCAAGCACAGCCATGTGTCTGCCTAAGCGGAGGTGCACAAGCAGCGTGAATTATAAGGAGCCGACACTAGCTTCGAAACTAAGAAGAGGAGACCCTTTCACAGATTTGTGTTTCTTGAATTCTCCTATTTTCAAGCAGAAAAAGAATTTGAAACGTTCTAAAAAAAGTATAAAGCAAATACAATAA

Related Sequences

XP_004864331.1 Protein

Sgol1 PREDICTED: shugoshin-like 1 isoform X2 [Heterocephalus glaber]

Length: 529 aa      View alignments
>XP_004864331.1
MAKERCQKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIPAPCQVITNTCTLLKNYQDNNRMLVLALENEKSKVREAQDIILQLRKECYYLACQLYALKEKLTSQQTEDTAQNQEVCLSGTDSNNDDNPRDLFAKDLPQVPFQETDLPGQEESSQIKEQILSTPQDTVGSDFDSGEAKSTADVLPRTVSLRRHVKEHFNSLSQFDTLDNFETSYLEGQSFELESIRYVAPVVNMHIPNNEEKNVYQWNTDKINLSPRLTEPGKFTKMEEVILESKAEKKTQHRGIQVRKKEKRKANRRKSKSTSKYKGNKSKNQKTVCSPKLDESVSSSDAYNFNLEEGIHLTPFRQKTNTDSNREKNNSTSEVSTFESSSSGDDSDDLYVPHCKNTQNLTSTSDRPVTRPRSKRALSLTDEQEMEVSKPTKTPTSVPPKTRPSPPSPHCRLKDITNVPLFPEIKIRRLSLSPEKNKASTAMCLPKRRCTSSVNYKEPTLASKLRRGDPFTDLCFLNSPIFKQKKNLKRSKKSIKQIQ