Details from NCBI annotation

Gene Symbol unclassified transcription discrepancy
Gene Name mRNA
Entrez Gene ID 101698583

Database interlinks

Part of NW_004624821.1 (Scaffold)

For more information consult the page for NW_004624821.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PP2D1 ENSCPOG00000027100 (Guinea pig)

Gene Details

protein phosphatase 2C-like domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000014420, Guinea pig)

Protein Percentage 77.27%
CDS Percentage 84.74%
Ka/Ks Ratio 0.37675 (Ka = 0.1276, Ks = 0.3388)

PP2D1 ENSG00000183977 (Human)

Gene Details

protein phosphatase 2C-like domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000373702, Human)

Protein Percentage 69.32%
CDS Percentage 80.02%
Ka/Ks Ratio 0.43416 (Ka = 0.1924, Ks = 0.4431)

Pp2d1 ENSMUSG00000044957 (Mouse)

Gene Details

protein phosphatase 2C-like domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000056682, Mouse)

Protein Percentage 57.63%
CDS Percentage 68.18%
Ka/Ks Ratio 0.34123 (Ka = 0.3248, Ks = 0.9518)

Pp2d1 ENSRNOG00000004719 (Rat)

Gene Details

protein phosphatase 2C-like domain containing 1 (Pp2d1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000006325, Rat)

Protein Percentage 57.0%
CDS Percentage 68.17%
Ka/Ks Ratio 0.37598 (Ka = 0.3335, Ks = 0.8869)

Genome Location

Sequence Coding sequence

Length: 1896 bp    Location: 5338154..5313084   Strand: -
>XM_004864272.1
ATGAATGTTGCGAGTGCTTTAAGAGTGTTTTGGAAATCAAGAGAATGGGATGGGAGAAAATCAACATTTGATTCAGAGGACAGTATTTCATCTGTACCTAAAAAGAAAAGGAATTTTCGAAAGAGCNNATCGAGGCCATCAGGACACAGTGCAGATGGTGAGGAGCAGCAGGTCTTTCCTCAAGAGGTCACCTTTCCCTGTTCCATGTGCAAGCAGGAAGTGGAAATCGCTGGTGCTTTTCTCCACAAAAAGGAACACATAGCGCTGGCTGCACTGGGACTCCAGTGGAGGGAAGGGAAGAAGCAGCCGCCCTCCAAGATTGTTGTTCAGAGACAGCTTGTGATTTCTAACCTGTTGTCATCCTTTATGCTCAATGAAAAAGTCCTACAGAACATTAATAATGCTTTTGAGCTACTGTGGAAGAAACAAATGCCAGTATACTGTAAAATTTTTGACAACATCGACAGGAGCTATGTATACCCTCAGAAACTCCATCATCTATTAATTAGAGGAGTAGCCACCTGTGAAGATAGGAATTCTACAAGGAAAGCTGCCATGAATGACAAATTCACCGTAATAAACAATTTTGGCAACAAACCCAATGTGTGCTTTTTTGGTTTGTTTGATGGTCACCTGGGTGCCTCAGCAGCAGACTTGGCATCGATGGAATTCGCAGTTTTACTCCTCCATCAGCTTTCTCAAGTTGACCCTTCTTACCTGATGACCCCGGAACAGCAGCAAGTAATCGATTCCTTTCATAGCGTCTTCAGAGAGGACTACACGGCCATAGAAGACCTCTTCTCGTCCACACAGAAAAGCACGAGCGCACACAGGTGTAATTATGAGGACATACACAAAGCCTTTGCAAAAGCCTTTTGGAGGATGGACAGACTGTTACGCCTTGGAAGGAGAGAAGTTTCCAGGGTTCTATGGAGTGGCTGCTCTGTAGTTACCTGTATACTGGAAGGAAAAATTAAATATCCTTATGCTAATATGAATTGGAGAAAAATCAACAGCAGTGATAAATTAGCAGCGAGCTTCCTCTCCCAGAAGATGCCACAAATAATTTCTGGAATATTACACATTGCAAACACTGGTAATGTGCAAGCAGTCTTATGCAGAAATGGGAAAGGATTTTGTCTCACCAAAGAACATACTACAGAAAACACCAGTGAAAGAGGAAGAGTACTTCAGAATGGAGCAGTAATTACTTCAAATGAACCATATGGGCTCCTAGAAGGGCACATAAAAACGACAAGAGGACTTGGATTTCATGGGAATCTCAAACTAAAAAAATTTATTATTCCAGCACCTGAAACTATTTCTATCCCTATAGATGACTTGTGTCAATTCCTTATCTTAGCTACTAATGGACTTTGGGAAGTTCTGGATAAAGAGGAAGTCATAGCACTGACAATAACANNCTTTCAGATATGTAAGAAAACATGTGCTTCTATCATACAAAACAAATCACTGCGCAACAAGCCTCTGTATCTTTCAATCAGTGATAAAAGCATTTCTGCATCAGACAGTAATAACCACATATTGTTTCAATATAATCCTGAATCTAAAGAATATGTGTCAACTACAAATTTAAAGAAAAATGTATCTGATTCAAAATATTCTGAACATTGTGTTTACAACTCTAAAAATGTAGAAACATTTCTACCACAGATGACTCATTATGAACCTTGCAGTGAAAATGAAACTGATAGACCAACCAGTGCAGATGATGGACAAATAAGCAAAGAGGAATCATACCCTAAGAATTTCTTTGAAGGTGCAGCTGAGTATGTTAGCCGTGGACTTGTAAATGCTGCTCTGGAGGCTGGTTCCAGAGACATTACAGTTATGGTAATATTTCTCAATGGAAGTGAATATCACTTGCTGATATAA

Related Sequences

XP_004864329.1 Protein

unclassified transcription discrepancy PREDICTED: LOW QUALITY PROTEIN: protein phosphatase 2C-like domain-containing protein 1 [Heterocephalus glaber]

Length: 631 aa      View alignments
>XP_004864329.1
MNVASALRVFWKSREWDGRKSTFDSEDSISSVPKKKRNFRKSXSRPSGHSADGEEQQVFPQEVTFPCSMCKQEVEIAGAFLHKKEHIALAALGLQWREGKKQPPSKIVVQRQLVISNLLSSFMLNEKVLQNINNAFELLWKKQMPVYCKIFDNIDRSYVYPQKLHHLLIRGVATCEDRNSTRKAAMNDKFTVINNFGNKPNVCFFGLFDGHLGASAADLASMEFAVLLLHQLSQVDPSYLMTPEQQQVIDSFHSVFREDYTAIEDLFSSTQKSTSAHRCNYEDIHKAFAKAFWRMDRLLRLGRREVSRVLWSGCSVVTCILEGKIKYPYANMNWRKINSSDKLAASFLSQKMPQIISGILHIANTGNVQAVLCRNGKGFCLTKEHTTENTSERGRVLQNGAVITSNEPYGLLEGHIKTTRGLGFHGNLKLKKFIIPAPETISIPIDDLCQFLILATNGLWEVLDKEEVIALTITXFQICKKTCASIIQNKSLRNKPLYLSISDKSISASDSNNHILFQYNPESKEYVSTTNLKKNVSDSKYSEHCVYNSKNVETFLPQMTHYEPCSENETDRPTSADDGQISKEESYPKNFFEGAAEYVSRGLVNAALEAGSRDITVMVIFLNGSEYHLLI