Sequence details NCBI ID: XM_004864225.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Slmap
Gene Name sarcolemma associated protein, transcript variant X1
Entrez Gene ID 101711875

Database interlinks

Part of NW_004624821.1 (Scaffold)

For more information consult the page for NW_004624821.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SLMAP ENSCPOG00000027044 (Guinea pig)

Gene Details

sarcolemma associated protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000017400, Guinea pig)

Protein Percentage 98.34%
CDS Percentage 96.25%
Ka/Ks Ratio 0.06305 (Ka = 0.0078, Ks = 0.1243)

SLMAP ENSG00000163681 (Human)

Gene Details

sarcolemma associated protein

External Links

Gene Match (Ensembl Protein ID: ENSP00000295951, Human)

Protein Percentage 97.66%
CDS Percentage 94.74%
Ka/Ks Ratio 0.05651 (Ka = 0.0109, Ks = 0.1927)

Slmap ENSMUSG00000021870 (Mouse)

Gene Details

sarcolemma associated protein

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000100021, Mouse)

Protein Percentage 92.56%
CDS Percentage 89.92%
Ka/Ks Ratio 0.10628 (Ka = 0.04, Ks = 0.3764)

Slmap ENSRNOG00000011307 (Rat)

Gene Details

sarcolemma associated protein (Slmap), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000060405, Rat)

Protein Percentage 91.09%
CDS Percentage 89.14%
Ka/Ks Ratio 0.12717 (Ka = 0.0488, Ks = 0.3833)

Genome Location

Sequence Coding sequence

Length: 2538 bp    Location: 492837..638112   Strand: +
Raw sequence   
>XM_004864225.1
ATGCCGTCAGCCTTGGCCATCTTCACTTGCCGCCCAAACTCGCACCCTTTTCAGGAGCGTCATGTCTACCTGGACGAGCCCATCAAAATCGGCCGCTCAGTGGCACGTTGTCGACCAGCGCAGAATAATGCCACCTTTGATTGCAAAGTGCTGTCAAGGAACCATGCTCTCGTCTGGTTTGATCACAAAACAGGCAAGTTTTATCTTCAAGACACTAAAAGTAGTAATGGTACCTTTATAAATAGCCAGAGATTAAGTCGAGGCTCTGAAGAAAGTCCACCATGTGAAATTCTTTCTGGTGATATTATCCAGTTTGGCGTAGATGTGACAGAGAACACACGGAAAGTTACCCATGGGTGTATTGTTTCCACAATAAAACTTTTTCTACCAGATGGTATGGAAGCCCGACTCCGCTCAGATGTCATCCATGCTCCATTACCAAGTCCTGTTGACAAAGTTGCTGCTAACACTCCAAGTATGTACTCTCAGGAACTATTCCAGCTTTCTCAGTATCTACAGGAGGCCTTACATCGGGAACAGATGTTAGAACAGAAGTTAGCCACGCTTCAGCGGCTACTGGCCATCACGCAAGAGGCTTCGGATACCAGTTGGCAGGCTTTAATAGATGAAGATAGACTCTTATCACGGTTAGAAGTTATGGGAAACCAATTACAGGCATGCTCCAAAAATCAAACAGAAGATAGCTTACGGAAGGAGCTTATAGCATTACAAGAAGATAAACACAACTATGAGACAACAGCCAAAGAATCCCTGAGGCGAGTTCTTCAGGAAAAAATAGAAGTGGTTAGAAAACTTTCGGAAGTTGAGCGAAGTCTCAGTAACACTGAAGATGAATGTACCCACCTGAAAGAAATGAATGAACGGACTCAGGAAGAATTAAGAGAATTAGCCAATAAATACAATGGAGCTGTTAATGAAATTAAAGATTTATCTGATAAATTAAAGGTAGCAGAGGGAAAACAAGAGGAAATCCAGCAGAAGGGACAAGCTGAGAAGAAAGAATTACAGCATAAAATAGATGAAATGGAAGAAAAAGAACAGGAGCTCCAGGCAAAAATAGAAGCTTTGCAAGCTGATAATGACTTCACCAATGAGAGGCTAACAGCTTTACAAGTACGGTTAGAACATCTTCAGGAGAAAACTCTTAAAGAATGCAGCAGCTTAGGGATACAAGTTGATGACTTCTTACCTAAAATAAATGGGAGCACAGAAAAAGAGCACTTGCTTTCAAAGAGTGGAGGGGACTGCACTTTTATTCATCAATTCATAGAATGCCAGAAGAAGCTGATCGTGGAGGGGCATCTAACCAAAGTGGTAGAAGAAACAAAGCTTTCAAAAGAAAACCAAGCAAGAGCAAAGGAATCTGACTTATCAGATACTCTGAGTCCAAGCAAGGAAAAAAGCAGTGACGACACTACAGACGCCCAGATGGATGAGCAAGACCTAAATGAACCTCTAGCTAAAGTGTCCCTATTAAAAGATGACTCACAGGGTGCACAGTCAGAAATTGAGGCAAAACAAGAAATTCAGCATCTTCGCAAGGAATTGATTGAAGCCCAGGAGCTAGCTAGAACAAGTAAACAAAAATGCTTTGAACTGCAAGCTCTTCTGGAAGAAGAAAGAAAAGCCTATAGAAATCAAGTTGAAGAATCTGCTAAACAAATACAGGTTCTTCAAGCCCAACTGCAGAGGTTACATATTGATATTGAGAATCTCCGGGAAGAGAAGGACAGTGAAGTCACAAGCACTAGAGATGAATTGCTTAGTGCCCGAGATGAAATTTTGCTCCTTCATCAAGCGGCAGCAAAAGCTGCCTCTGAGCGGGACACTGACATAGCTTCTTTGCAAGAAGAGCTTAAGAAGGTACGAGCTGAGCTTGACCGATGGAGGAAAGCAGCATCTGAATATGAGAGAGAAATCACAGGTCTGCAAAACAGTTTTCAGCTGCGATGTCAACAGTGTGAGGACCAACAGAGAGAAGAAGCAACAAGGTTGCAGGGTGAACTAGAAAAGTTGAAAAAGGAATGGAATGTACTGGAAACTGAATGCCATTCTCTGAAAAAGGAAAATGTTTTGTTATCTTCAGAACTGCAGCGGCAAGAAAAAGAACTGCACAATTCTCAAAAGCAGAGTTTAGAGCTTACCAGTGATCTCAGCATTCTTCAGATGACTAGAAAAGAGCTTGAAAATCAAGTGGGATCCTTGAAAGAACAGCATCTTCGGGACTCAGCTGATTTAAAAACTCTTCTCACTAAGGCTGAAAGCCAAGCAAAGGATGTACAGAAAGAGTATGAAAAGACACAGACTGTACTCTCAGAACTGAAGTTGAAGTTTGAAATGACTGAGCAGGAAAAGCAGTCAATCACAGATCAGCTCAAACAATGTAAAGACAACCTGAAGCTGCTTCGAGAGAAAGGAAATAATAAACCCTGGCCCTGGATGCCCATGTTGGCTGCCCTGGTTGCGGTGACAGCCATCGTGCTGTATGTGCCAGGTCTGGCCAGAGCTTCTCCATGA

Related Sequences

XP_004864282.1 Protein

Slmap PREDICTED: sarcolemmal membrane-associated protein isoform X1 [Heterocephalus glaber]

Length: 845 aa      View alignments
>XP_004864282.1
MPSALAIFTCRPNSHPFQERHVYLDEPIKIGRSVARCRPAQNNATFDCKVLSRNHALVWFDHKTGKFYLQDTKSSNGTFINSQRLSRGSEESPPCEILSGDIIQFGVDVTENTRKVTHGCIVSTIKLFLPDGMEARLRSDVIHAPLPSPVDKVAANTPSMYSQELFQLSQYLQEALHREQMLEQKLATLQRLLAITQEASDTSWQALIDEDRLLSRLEVMGNQLQACSKNQTEDSLRKELIALQEDKHNYETTAKESLRRVLQEKIEVVRKLSEVERSLSNTEDECTHLKEMNERTQEELRELANKYNGAVNEIKDLSDKLKVAEGKQEEIQQKGQAEKKELQHKIDEMEEKEQELQAKIEALQADNDFTNERLTALQVRLEHLQEKTLKECSSLGIQVDDFLPKINGSTEKEHLLSKSGGDCTFIHQFIECQKKLIVEGHLTKVVEETKLSKENQARAKESDLSDTLSPSKEKSSDDTTDAQMDEQDLNEPLAKVSLLKDDSQGAQSEIEAKQEIQHLRKELIEAQELARTSKQKCFELQALLEEERKAYRNQVEESAKQIQVLQAQLQRLHIDIENLREEKDSEVTSTRDELLSARDEILLLHQAAAKAASERDTDIASLQEELKKVRAELDRWRKAASEYEREITGLQNSFQLRCQQCEDQQREEATRLQGELEKLKKEWNVLETECHSLKKENVLLSSELQRQEKELHNSQKQSLELTSDLSILQMTRKELENQVGSLKEQHLRDSADLKTLLTKAESQAKDVQKEYEKTQTVLSELKLKFEMTEQEKQSITDQLKQCKDNLKLLREKGNNKPWPWMPMLAALVAVTAIVLYVPGLARASP