Sequence details NCBI ID: XM_004864220.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Psmb11
Gene Name proteasome (prosome, macropain) subunit, beta type, 11
Entrez Gene ID 101708621

Database interlinks

Part of NW_004624820.1 (Scaffold)

For more information consult the page for NW_004624820.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PSMB11 ENSCPOG00000014048 (Guinea pig)

Gene Details

proteasome (prosome, macropain) subunit, beta type, 11

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000019531, Guinea pig)

Protein Percentage 91.3%
CDS Percentage 89.53%
Ka/Ks Ratio 0.11595 (Ka = 0.0422, Ks = 0.364)

PSMB11 ENSG00000222028 (Human)

Gene Details

proteasome (prosome, macropain) subunit, beta type, 11

External Links

Gene Match (Ensembl Protein ID: ENSP00000386212, Human)

Protein Percentage 83.67%
CDS Percentage 86.78%
Ka/Ks Ratio 0.27079 (Ka = 0.0908, Ks = 0.3351)

Psmb11 ENSMUSG00000072423 (Mouse)

Gene Details

proteasome (prosome, macropain) subunit, beta type, 11

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000132140, Mouse)

Protein Percentage 81.0%
CDS Percentage 81.33%
Ka/Ks Ratio 0.21314 (Ka = 0.1244, Ks = 0.5839)

Psmb11 ENSRNOG00000047091 (Rat)

Gene Details

proteasome (prosome, macropain) subunit, beta type, 11 (Psmb11), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000065348, Rat)

Protein Percentage 81.61%
CDS Percentage 82.61%
Ka/Ks Ratio 0.20488 (Ka = 0.1108, Ks = 0.5408)

Genome Location

Sequence Coding sequence

Length: 903 bp    Location: 9499222..9498320   Strand: -
Raw sequence   
>XM_004864220.1
ATGGCTCTGCAGGATGTGTGCAAGTGGCAGGCTCCTGACATCCAGGGACTGTCCCCTCGCTTGCCTCAGGCTGGCGGCTGGGTTGTGCCCCGGGGCTGTGACCCTCAGTCCTTCCTGTGGATCCACGGCCCCAGGCTGGCCCATGGCACCACCACCCTGGCCTTCCGCTTCCGGCATGGCGTTATTGCTGCAGCTGACACGCGTTCCTCCTGTGGCAGATACGTGGCCTGTCCAACTTCACTCAAGGTCATCCCTGTGCACCAGCACCTCCTCGGTACCACTTCTGGCACCTCAGCTGACTGTGCTACATGGTACCGGGTACTGCAGCGGGAGCTGCGGCTTCGGGCATTGAGGGAGGGTCAGCTGCCCAGTGTGGCCAGTGCAGCCAAGCTCTTGTCAGCCATGATGTCTCGCTACCGGGGGCTGGATCTGTGTGTGGCTACTGCCCTGTGTGGCTGGGACCGCTCTGGCCCTGCTCTCTTCTACGTGTACAGTGATGGCACCCGCTTGCAGGGGGACATATTCTCCGTGGGCTCTGGATCTCCCTATGCCTATGGTGTGCTAGATCGTGGCTACCACTACGACATGACCATCCAGGAAGCCTACACCCTGGCCCGTTGTGCTGTGGCCCATGCCACCCACCGTGATGCCTACTCAGGGGGCTCTGTAGACCTTTTCCATGTACGGGAGAGCGGCTGGGAGTATGTGTCACGAAGTGACACCTGTGTTGTGTACAGGGAGCTGCAGATGTTCCCGGAACCAGAGCTGGAGGGTGAGTCCAGCCAGCCCCAGCCTGAGACTGTCATTCCTCATGGAGCTGAGGAAGGTGGAGAATTCCCTGTGGGGCCAAGGGAGATGGCACCAGAAGACTCCAGGATGCCAGCAGAGACTGAGAGGCTGTGA

Related Sequences

XP_004864277.1 Protein

Psmb11 PREDICTED: proteasome subunit beta type-11 [Heterocephalus glaber]

Length: 300 aa      View alignments
>XP_004864277.1
MALQDVCKWQAPDIQGLSPRLPQAGGWVVPRGCDPQSFLWIHGPRLAHGTTTLAFRFRHGVIAAADTRSSCGRYVACPTSLKVIPVHQHLLGTTSGTSADCATWYRVLQRELRLRALREGQLPSVASAAKLLSAMMSRYRGLDLCVATALCGWDRSGPALFYVYSDGTRLQGDIFSVGSGSPYAYGVLDRGYHYDMTIQEAYTLARCAVAHATHRDAYSGGSVDLFHVRESGWEYVSRSDTCVVYRELQMFPEPELEGESSQPQPETVIPHGAEEGGEFPVGPREMAPEDSRMPAETERL