Sequence details NCBI ID: XM_004864185.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Psmb5
Gene Name proteasome (prosome, macropain) subunit, beta type, 5
Entrez Gene ID 101720045

Database interlinks

Part of NW_004624820.1 (Scaffold)

For more information consult the page for NW_004624820.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PSMB5 ENSCPOG00000014047 (Guinea pig)

Gene Details

proteasome (prosome, macropain) subunit, beta type, 5

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012652, Guinea pig)

Protein Percentage 97.34%
CDS Percentage 92.9%
Ka/Ks Ratio 0.04805 (Ka = 0.0128, Ks = 0.267)

PSMB5 ENSG00000100804 (Human)

Gene Details

proteasome (prosome, macropain) subunit, beta type, 5

External Links

Gene Match (Ensembl Protein ID: ENSP00000355325, Human)

Protein Percentage 95.82%
CDS Percentage 91.0%
Ka/Ks Ratio 0.066 (Ka = 0.022, Ks = 0.3339)

Psmb5 ENSMUSG00000022193 (Mouse)

Gene Details

proteasome (prosome, macropain) subunit, beta type 5

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000022803, Mouse)

Protein Percentage 95.44%
CDS Percentage 89.48%
Ka/Ks Ratio 0.05645 (Ka = 0.024, Ks = 0.4259)

Psmb5 ENSRNOG00000013386 (Rat)

Gene Details

proteasome (prosome, macropain) subunit, beta type 5 (Psmb5), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000018005, Rat)

Protein Percentage 94.68%
CDS Percentage 89.86%
Ka/Ks Ratio 0.07746 (Ka = 0.0295, Ks = 0.3806)

Genome Location

Sequence Coding sequence

Length: 792 bp    Location: 9506073..9513034   Strand: +
Raw sequence   
>XM_004864185.1
ATGGCGCTGGCCAGCATGTTGGAGAGGCCGCTACCGGTAAACCAGCGTGGGTTTTTCGGACTCGGGGGTCGTGCAGATCTACTAGACCTGGGTCCAGGGAGTCCCAGCGATGGGCTGAGCCTAGCCGCGCCCAGCTGGGGTGCCCCGGAGGAGCCGCGAATCGAAATGCTTCATGGAACCACCACCCTGGCCTTCAAGTTTCGCCATGGAGTCATTGTTGCAGCAGACTCCCGGGCCACAGCGGGTGCTTACATCGCTTCCCAGACGGTAAAGAAGGTGATAGAGATCAACCCCTACCTTCTGGGCACCATGGCTGGAGGTGCAGCGGATTGCAGCTTCTGGGAGCGGCTTTTGGCTCGGCAATGTCGAATCTATGAGCTGCGAAATAAGGAACGCATTTCGGTAGCAGCGGCCTCCAAGCTGCTTGCTAACATGGTCTATCAGTACAAAGGCATGGGGCTGTCCATGGGCACCATGATCTGTGGCTGGGATAAGAGAGGCCCTGGCCTCTACTATGTGGACAGTGAAGGGAACCGGATCTCTGGAGTTGCCTTCTCCGTAGGTTCTGGCTCTGTGTATGCTTATGGGGTCATGGATCGAGGTTACTCCTATGACCTGGAAGTGGAGGAGGCCTATGACCTGGCCCGTCGAGCCATCTACCAAGCCACCTACCGAGATGCCTACTCAGGAGGTTCGGTCAACCTCTACCATGTGCGTGAGGATGGCTGGATCCGGGTCTCCAGTGACAATGTAGCCGATCTTCATGACAAGTATAGTGGATCTGTCCCCTGA

Related Sequences

XP_004864242.1 Protein

Psmb5 PREDICTED: proteasome subunit beta type-5 [Heterocephalus glaber]

Length: 263 aa      View alignments
>XP_004864242.1
MALASMLERPLPVNQRGFFGLGGRADLLDLGPGSPSDGLSLAAPSWGAPEEPRIEMLHGTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGNRISGVAFSVGSGSVYAYGVMDRGYSYDLEVEEAYDLARRAIYQATYRDAYSGGSVNLYHVREDGWIRVSSDNVADLHDKYSGSVP